RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 M6PRP20645 277 aa13.73□□□□□ -0.21
SRSF1-201ENST00000258962 TAGLN2P37802 199 aaKnown RBP13.73□□□□□ -0.21
SRSF1-201ENST00000258962 PRR20EP86478 221 aa13.73□□□□□ -0.21
SRSF1-201ENST00000258962 PRR20CP86479 221 aa13.73□□□□□ -0.21
SRSF1-201ENST00000258962 PRR20DP86480 221 aa13.73□□□□□ -0.21
SRSF1-201ENST00000258962 PRR20BP86481 221 aa13.73□□□□□ -0.21
SRSF1-201ENST00000258962 PRR20AP86496 221 aa13.73□□□□□ -0.21
SRSF1-201ENST00000258962 GCSAMLQ5JQS6 135 aa13.73□□□□□ -0.21
SRSF1-201ENST00000258962 OR10G4Q8NGN3 311 aa13.73□□□□□ -0.21
SRSF1-201ENST00000258962 OR10G9Q8NGN4 311 aa13.73□□□□□ -0.21
SRSF1-201ENST00000258962 OR10G7Q8NGN6 311 aa13.73□□□□□ -0.21
SRSF1-201ENST00000258962 OR5R1Q8NH85 324 aa13.73□□□□□ -0.21
SRSF1-201ENST00000258962 ACY3Q96HD9 319 aa13.73□□□□□ -0.21
SRSF1-201ENST00000258962 SLC45A2Q9UMX9 530 aa13.73□□□□□ -0.21
SRSF1-201ENST00000258962 MOB4Q9Y3A3 225 aa13.73□□□□□ -0.21
SRSF1-201ENST00000258962 A6NDX4 124 aa13.72□□□□□ -0.21
SRSF1-201ENST00000258962 NPIPB5A8MRT5 1133 aa13.72□□□□□ -0.21
SRSF1-201ENST00000258962 H3BUX3 64 aa13.72□□□□□ -0.21
SRSF1-201ENST00000258962 CORTO00230 105 aa13.72□□□□□ -0.21
SRSF1-201ENST00000258962 EIF3GO75821 320 aaKnown RBP eCLIP13.72□□□□□ -0.21
SRSF1-201ENST00000258962 SNAPINO95295 136 aa13.72□□□□□ -0.21
SRSF1-201ENST00000258962 AMY1AP04745 511 aa13.72□□□□□ -0.21
SRSF1-201ENST00000258962 LINC00869P0C866 280 aa13.72□□□□□ -0.21
SRSF1-201ENST00000258962 DEFA4P12838 97 aa13.72□□□□□ -0.21
SRSF1-201ENST00000258962 OR10J1P30954 320 aa13.72□□□□□ -0.21
SRSF1-201ENST00000258962 RPL29P47914 159 aaKnown RBP13.72□□□□□ -0.21
SRSF1-201ENST00000258962 PMS2P11Q13670 270 aa13.72□□□□□ -0.21
SRSF1-201ENST00000258962 C12orf54Q6X4T0 127 aa13.72□□□□□ -0.21
SRSF1-201ENST00000258962 STPG3Q8N7X2 389 aa13.72□□□□□ -0.21
SRSF1-201ENST00000258962 TMEM231Q9H6L2 316 aa13.72□□□□□ -0.21
SRSF1-201ENST00000258962 CTXND1A0A1B0GTU2 59 aa13.71□□□□□ -0.21
SRSF1-201ENST00000258962 TMEM89A2RUT3 159 aa13.71□□□□□ -0.21
SRSF1-201ENST00000258962 FAM181BA6NEQ2 426 aa13.71□□□□□ -0.21
SRSF1-201ENST00000258962 SH2D7A6NKC9 451 aaPredicted RBP13.71□□□□□ -0.21
SRSF1-201ENST00000258962 SFTA3P0C7M3 94 aa13.71□□□□□ -0.21
SRSF1-201ENST00000258962 RND2P52198 227 aa13.71□□□□□ -0.21
SRSF1-201ENST00000258962 B2MP61769 119 aa13.71□□□□□ -0.21
SRSF1-201ENST00000258962 FAM122CQ6P4D5 195 aa13.71□□□□□ -0.21
SRSF1-201ENST00000258962 LCN15Q6UWW0 184 aa13.71□□□□□ -0.21
SRSF1-201ENST00000258962 THAP8Q8NA92 274 aa13.71□□□□□ -0.21
SRSF1-201ENST00000258962 NPIPB3Q92617 1050 aa13.71□□□□□ -0.21
SRSF1-201ENST00000258962 SLC35B3Q9H1N7 401 aa13.71□□□□□ -0.21
SRSF1-201ENST00000258962 SLC25A22Q9H936 323 aa13.71□□□□□ -0.21
SRSF1-201ENST00000258962 IGKV1D-37A0A075B6S9 117 aa13.7□□□□□ -0.22
SRSF1-201ENST00000258962 MAP1LC3B2A6NCE7 125 aa13.7□□□□□ -0.22
SRSF1-201ENST00000258962 I3L2K1 104 aa13.7□□□□□ -0.22
SRSF1-201ENST00000258962 MT-CO2P00403 227 aa13.7□□□□□ -0.22
SRSF1-201ENST00000258962 FOXL1Q12952 345 aa13.7□□□□□ -0.22
SRSF1-201ENST00000258962 LY6EQ16553 131 aa13.7□□□□□ -0.22
SRSF1-201ENST00000258962 KHDC3LQ587J8 217 aa13.7□□□□□ -0.22
SRSF1-201ENST00000258962 ETFRF1Q6IPR1 90 aa13.7□□□□□ -0.22
SRSF1-201ENST00000258962 TTC9CQ8N5M4 171 aa13.7□□□□□ -0.22
SRSF1-201ENST00000258962 MAP1LC3BQ9GZQ8 125 aa13.7□□□□□ -0.22
SRSF1-201ENST00000258962 IGHV3-21A0A0B4J1V1 117 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 SEC14L6B5MCN3 397 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 ATP6V0E1O15342 81 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 PPT1P50897 306 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 FGF8P55075 233 aaPredicted RBP13.69□□□□□ -0.22
SRSF1-201ENST00000258962 VPREB3Q9UKI3 123 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 STAB1Q9NY15 2570 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 IGLV11-55A0A075B6I3 123 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 A0A1W2PPV4 95 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 LINC01548A6NM66 108 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 C9JQL5 133 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 K7EIM0 57 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 HSPB1P04792 205 aaKnown RBP13.69□□□□□ -0.22
SRSF1-201ENST00000258962 GATA2P23769 480 aaPredicted RBP13.69□□□□□ -0.22
SRSF1-201ENST00000258962 RPL15P61313 204 aaKnown RBP13.69□□□□□ -0.22
SRSF1-201ENST00000258962 ZNF506Q5JVG8 444 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 CYP2G1PQ6ZSU1 146 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 OR1L6Q8NGR2 347 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 SGMS2Q8NHU3 365 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 RAB24Q969Q5 203 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 FANCD2OSQ96PS1 177 aa13.69□□□□□ -0.22
SRSF1-201ENST00000258962 HMGB3O15347 200 aaKnown RBP13.68□□□□□ -0.22
SRSF1-201ENST00000258962 CDC34P49427 236 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-201ENST00000258962 TMEM116Q8NCL8 245 aa13.68□□□□□ -0.22
SRSF1-201ENST00000258962 NKX6-2Q9C056 277 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-201ENST00000258962 TCRBV4S1A1TA0A5B7 111 aa13.67□□□□□ -0.22
SRSF1-201ENST00000258962 NDUFS6O75380 124 aaKnown RBP13.67□□□□□ -0.22
SRSF1-201ENST00000258962 C3orf56Q8N813 242 aa13.67□□□□□ -0.22
SRSF1-201ENST00000258962 ADCYAP1P18509 176 aa13.66□□□□□ -0.22
SRSF1-201ENST00000258962 ZNF90Q03938 601 aa13.66□□□□□ -0.22
SRSF1-201ENST00000258962 AWAT1Q58HT5 328 aa13.66□□□□□ -0.22
SRSF1-201ENST00000258962 OR5T1Q8NG75 326 aa13.66□□□□□ -0.22
SRSF1-201ENST00000258962 OR4F5Q8NH21 305 aa13.66□□□□□ -0.22
SRSF1-201ENST00000258962 FAM110DQ8TAY7 271 aaPredicted RBP13.66□□□□□ -0.22
SRSF1-201ENST00000258962 RARRES2Q99969 163 aa13.66□□□□□ -0.22
SRSF1-201ENST00000258962 ZFP92A6NM28 416 aa13.65□□□□□ -0.22
SRSF1-201ENST00000258962 HAGHQ16775 308 aa13.65□□□□□ -0.22
SRSF1-201ENST00000258962 ECSCRQ19T08 205 aa13.65□□□□□ -0.22
SRSF1-201ENST00000258962 SOHLH1Q5JUK2 328 aa13.65□□□□□ -0.22
SRSF1-201ENST00000258962 UNQ5815/PRO19632Q6UWF5 114 aa13.65□□□□□ -0.22
SRSF1-201ENST00000258962 OR4X1Q8NH49 305 aa13.65□□□□□ -0.22
SRSF1-201ENST00000258962 TRGV9Q99603 122 aa13.65□□□□□ -0.22
SRSF1-201ENST00000258962 MANBALQ9NQG1 85 aa13.65□□□□□ -0.22
SRSF1-201ENST00000258962 GNG13Q9P2W3 67 aa13.65□□□□□ -0.22
SRSF1-201ENST00000258962 VAX2Q9UIW0 290 aa13.65□□□□□ -0.22
SRSF1-201ENST00000258962 PITPNC1Q9UKF7 332 aa13.65□□□□□ -0.22
SRSF1-201ENST00000258962 LOC102723971A0A1B0GUV8 181 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms