RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 SLC25A17O43808 307 aa12.27□□□□□ -0.44
DDX56-201ENST00000258772 ZNF253O75346 499 aa12.27□□□□□ -0.44
DDX56-201ENST00000258772 SRIP30626 198 aa12.27□□□□□ -0.44
DDX56-201ENST00000258772 ZNF137PP52743 207 aa12.27□□□□□ -0.44
DDX56-201ENST00000258772 FXYD5Q96DB9 178 aa12.27□□□□□ -0.44
DDX56-201ENST00000258772 RITA1Q96K30 269 aa12.27□□□□□ -0.44
DDX56-201ENST00000258772 RCHY1Q96PM5 261 aa12.27□□□□□ -0.44
DDX56-201ENST00000258772 ATG101Q9BSB4 218 aa12.27□□□□□ -0.44
DDX56-201ENST00000258772 CTSZQ9UBR2 303 aa12.27□□□□□ -0.44
DDX56-201ENST00000258772 RNF114Q9Y508 228 aa12.27□□□□□ -0.44
DDX56-201ENST00000258772 A0A1W2PPI3 338 aa12.27□□□□□ -0.45
DDX56-201ENST00000258772 A0A1W2PS18 150 aa12.27□□□□□ -0.45
DDX56-201ENST00000258772 PEX7O00628 323 aa12.27□□□□□ -0.45
DDX56-201ENST00000258772 TCAPO15273 167 aa12.27□□□□□ -0.45
DDX56-201ENST00000258772 LOXP28300 417 aaPredicted RBP12.27□□□□□ -0.45
DDX56-201ENST00000258772 DLX6P56179 175 aa12.27□□□□□ -0.45
DDX56-201ENST00000258772 VMA21Q3ZAQ7 101 aa12.27□□□□□ -0.45
DDX56-201ENST00000258772 ASPHD1Q5U4P2 390 aa12.27□□□□□ -0.45
DDX56-201ENST00000258772 ZNF705AQ6ZN79 300 aaPredicted RBP12.27□□□□□ -0.45
DDX56-201ENST00000258772 FAM231DQ6ZW35 169 aa12.27□□□□□ -0.45
DDX56-201ENST00000258772 MBD6Q96DN6 1003 aa12.27□□□□□ -0.45
DDX56-201ENST00000258772 TPSG1Q9NRR2 321 aa12.27□□□□□ -0.45
DDX56-201ENST00000258772 TBL2Q9Y4P3 447 aaKnown RBP12.27□□□□□ -0.45
DDX56-201ENST00000258772 TRAV34A0A0B4J273 112 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 REG1AP05451 166 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 MC5RP33032 325 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 TMEM183BQ1AE95 376 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 MRGPRG-AS1Q2M3A8 158 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 ASCL5Q7RTU5 278 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 LINC00305Q7Z4B0 112 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 KCNS1Q96KK3 526 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 NEU1Q99519 415 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 MIEN1Q9BRT3 115 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 ZNF331Q9NQX6 463 aaPredicted RBP12.26□□□□□ -0.45
DDX56-201ENST00000258772 ZNF586Q9NXT0 402 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 PAM16Q9Y3D7 125 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 APCSP02743 223 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 AMTP48728 403 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 RNASE6Q93091 150 aaKnown RBP12.26□□□□□ -0.45
DDX56-201ENST00000258772 VAMP8Q9BV40 100 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 NRN1Q9NPD7 142 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
DDX56-201ENST00000258772 ACACAQ13085 2346 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 MYCNOSP40205 109 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 LGALS7P47929 136 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 TDGF1P3P51864 188 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 TMEM155Q4W5P6 130 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 NUDT10Q8NFP7 164 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 NUDT11Q96G61 164 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 VSTM5A8MXK1 200 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 C22orf46C9J442 243 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 PLAUP00749 431 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 KRTDAPP60985 99 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 TBR1Q16650 682 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 RUSC1-AS1Q66K80 236 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 Q8N976 141 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 WIPF2Q8TF74 440 aaPredicted RBP12.25□□□□□ -0.45
DDX56-201ENST00000258772 JKAMPQ9P055 326 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 KAAG1Q9UBP8 84 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 SH3BGRL2Q9UJC5 107 aa12.25□□□□□ -0.45
DDX56-201ENST00000258772 RIF1Q5UIP0 2472 aaKnown RBP12.24□□□□□ -0.45
DDX56-201ENST00000258772 ENSAO43768 121 aaKnown RBP12.24□□□□□ -0.45
DDX56-201ENST00000258772 CRYGCP07315 174 aa12.24□□□□□ -0.45
DDX56-201ENST00000258772 IGHV1-8P0DP01 117 aa12.24□□□□□ -0.45
DDX56-201ENST00000258772 SLAQ13239 276 aa12.24□□□□□ -0.45
DDX56-201ENST00000258772 ETFRF1Q6IPR1 90 aa12.24□□□□□ -0.45
DDX56-201ENST00000258772 RASL11AQ6T310 242 aa12.24□□□□□ -0.45
DDX56-201ENST00000258772 C11orf42Q8N5U0 333 aa12.24□□□□□ -0.45
DDX56-201ENST00000258772 GRAMD2BQ96HH9 432 aa12.24□□□□□ -0.45
DDX56-201ENST00000258772 TNFRSF19Q9NS68 423 aa12.24□□□□□ -0.45
DDX56-201ENST00000258772 IGHV3-72A0A0B4J1Y9 119 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 IGLC7A0M8Q6 106 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 DIRC3C9JPN6 131 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 ZNF324O75467 553 aaPredicted RBP12.23□□□□□ -0.45
DDX56-201ENST00000258772 ORM2P19652 201 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 HCP5Q6MZN7 132 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 NUP35Q8NFH5 326 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 POLEQ07864 2286 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 MALRD1Q5VYJ5 2156 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 BSNQ9UPA5 3926 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 MOSP00540 346 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 PMCHP20382 165 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 MFAP2P55001 183 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 GNG5P63218 68 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 PVRIGQ6DKI7 326 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 STXBP6Q8NFX7 210 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 TMEM68Q96MH6 324 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 EPDR1Q9UM22 224 aa12.23□□□□□ -0.45
DDX56-201ENST00000258772 M0QZK8 103 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 MAJINQ3KP22 176 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 SSX8Q7RTT4 187 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 MRPL52Q86TS9 123 aaKnown RBP12.22□□□□□ -0.45
DDX56-201ENST00000258772 TEX45Q8NA69 505 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 OR1B1Q8NGR6 318 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 TSKUQ8WUA8 353 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 PERPQ96FX8 193 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 ABHD17AQ96GS6 310 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 TMEM133Q9H2Q1 129 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 C7orf69Q9H7B7 122 aa12.22□□□□□ -0.45
DDX56-201ENST00000258772 ABCA1O95477 2261 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms