RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 ISOC2Q96AB3 205 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 LAMTOR3Q9UHA4 124 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 BRWD1Q9NSI6 2320 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 LINC00158P58513 81 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 DEFB113Q30KQ7 82 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 PLSCR2Q9NRY7 297 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 SMIM6P0DI80 62 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 LINC01590Q5TEZ4 76 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 RNF5Q99942 180 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 WFDC6Q9BQY6 131 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 TM2D1Q9BX74 207 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 NPCDR1Q9BY65 106 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 MRPL18Q9H0U6 180 aaKnown RBP11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 IGHV1-69DA0A0B4J2H0 117 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 VWC2LB2RUY7 222 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 IGHV1-69P01742 117 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 ZNF345Q14585 488 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 ZNF562Q6V9R5 426 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 TRIOBPQ9H2D6 2365 aa11.85□□□□□ -0.51
ZC3H4-201ENST00000253048 MIA3Q5JRA6 1907 aa11.84□□□□□ -0.51
ZC3H4-201ENST00000253048 CGAP01215 116 aa11.84□□□□□ -0.51
ZC3H4-201ENST00000253048 GTF3AQ92664 365 aaKnown RBP11.84□□□□□ -0.51
ZC3H4-201ENST00000253048 ZNF414Q96IQ9 312 aa11.84□□□□□ -0.51
ZC3H4-201ENST00000253048 WNK3Q9BYP7 1800 aa11.84□□□□□ -0.51
ZC3H4-201ENST00000253048 APOMO95445 188 aa11.84□□□□□ -0.51
ZC3H4-201ENST00000253048 ZNF497Q6ZNH5 498 aa11.84□□□□□ -0.51
ZC3H4-201ENST00000253048 IGHV4-39P01824 125 aa11.84□□□□□ -0.51
ZC3H4-201ENST00000253048 LMO1P25800 156 aa11.84□□□□□ -0.51
ZC3H4-201ENST00000253048 RBBP6Q7Z6E9 1792 aaKnown RBP11.84□□□□□ -0.51
ZC3H4-201ENST00000253048 A0A1B0GV72 72 aa11.84□□□□□ -0.51
ZC3H4-201ENST00000253048 GGNQ86UU5 652 aa11.84□□□□□ -0.51
ZC3H4-201ENST00000253048 DPRXA6NFQ7 191 aa11.83□□□□□ -0.51
ZC3H4-201ENST00000253048 UQCR10Q9UDW1 63 aa11.83□□□□□ -0.51
ZC3H4-201ENST00000253048 PLXNA1Q9UIW2 1896 aa11.83□□□□□ -0.52
ZC3H4-201ENST00000253048 SCN10AQ9Y5Y9 1956 aa11.83□□□□□ -0.52
ZC3H4-201ENST00000253048 NAT1P18440 290 aa11.83□□□□□ -0.52
ZC3H4-201ENST00000253048 RNF182Q8N6D2 247 aa11.83□□□□□ -0.52
ZC3H4-201ENST00000253048 BUB1B-PAK6H3BSN5 160 aa11.83□□□□□ -0.52
ZC3H4-201ENST00000253048 SMDT1Q9H4I9 107 aa11.83□□□□□ -0.52
ZC3H4-201ENST00000253048 C7orf77A4D0Y5 90 aa11.83□□□□□ -0.52
ZC3H4-201ENST00000253048 GZMBP10144 247 aa11.83□□□□□ -0.52
ZC3H4-201ENST00000253048 SUMO4Q6EEV6 95 aa11.83□□□□□ -0.52
ZC3H4-201ENST00000253048 C18orf15Q96N68 181 aa11.83□□□□□ -0.52
ZC3H4-201ENST00000253048 PLA2G2CQ5R387 149 aa11.83□□□□□ -0.52
ZC3H4-201ENST00000253048 Q6AWC8 147 aa11.83□□□□□ -0.52
ZC3H4-201ENST00000253048 ZNF474Q6S9Z5 364 aaPredicted RBP11.83□□□□□ -0.52
ZC3H4-201ENST00000253048 FCN3O75636 299 aa11.82□□□□□ -0.52
ZC3H4-201ENST00000253048 PSG1P11464 419 aa11.82□□□□□ -0.52
ZC3H4-201ENST00000253048 TRAV8-2A0A0B4J237 113 aa11.82□□□□□ -0.52
ZC3H4-201ENST00000253048 GATA2P23769 480 aaPredicted RBP11.82□□□□□ -0.52
ZC3H4-201ENST00000253048 C5orf64Q2M2E5 130 aa11.82□□□□□ -0.52
ZC3H4-201ENST00000253048 HEPN1Q6WQI6 88 aa11.82□□□□□ -0.52
ZC3H4-201ENST00000253048 C5orf66Q9H5L9 145 aa11.82□□□□□ -0.52
ZC3H4-201ENST00000253048 DOCK3Q8IZD9 2030 aa11.82□□□□□ -0.52
ZC3H4-201ENST00000253048 NDPQ00604 133 aa11.82□□□□□ -0.52
ZC3H4-201ENST00000253048 RPP21Q9H633 154 aaKnown RBP11.82□□□□□ -0.52
ZC3H4-201ENST00000253048 A0A1B0GW15 77 aa11.82□□□□□ -0.52
ZC3H4-201ENST00000253048 TFF3Q07654 80 aa11.82□□□□□ -0.52
ZC3H4-201ENST00000253048 ELF5Q9UKW6 265 aaPredicted RBP11.82□□□□□ -0.52
ZC3H4-201ENST00000253048 SRRM5B3KS81 715 aa11.81□□□□□ -0.52
ZC3H4-201ENST00000253048 CA1P00915 261 aaPredicted RBP11.81□□□□□ -0.52
ZC3H4-201ENST00000253048 SRIP30626 198 aa11.81□□□□□ -0.52
ZC3H4-201ENST00000253048 RBMY1FQ15415 496 aaKnown RBP11.81□□□□□ -0.52
ZC3H4-201ENST00000253048 MIR17HGQ75NE6 70 aa11.81□□□□□ -0.52
ZC3H4-201ENST00000253048 BIVMQ86UB2 503 aa11.81□□□□□ -0.52
ZC3H4-201ENST00000253048 SEC16AO15027 2179 aa11.81□□□□□ -0.52
ZC3H4-201ENST00000253048 UBE2E1P51965 193 aa11.81□□□□□ -0.52
ZC3H4-201ENST00000253048 RND3P61587 244 aa11.81□□□□□ -0.52
ZC3H4-201ENST00000253048 IGFL3Q6UXB1 125 aa11.81□□□□□ -0.52
ZC3H4-201ENST00000253048 FOXL1Q12952 345 aa11.81□□□□□ -0.52
ZC3H4-201ENST00000253048 ZNF48Q96MX3 618 aaPredicted RBP11.81□□□□□ -0.52
ZC3H4-201ENST00000253048 TMEM126AQ9H061 195 aa11.81□□□□□ -0.52
ZC3H4-201ENST00000253048 A0A1B0GUT8 65 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 LINC00271P0C7V0 271 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 PLA2G10O15496 165 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 RPL15P61313 204 aaKnown RBP11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 HIST1H4AP62805 103 aaKnown RBP11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 MST1LQ2TV78 715 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 LAIR2Q6ISS4 152 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 GATD1Q8NB37 220 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 HBDP02042 147 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 AMBPP02760 352 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 ZNF362Q5T0B9 420 aaPredicted RBP11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 MESP1Q9BRJ9 268 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 HLA-DQB1P01920 261 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 CXCL3P19876 107 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 DEFB131AP59861 70 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 SS18Q15532 418 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 FLVCR1-AS1Q8TAF5 88 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 RHPN1-AS1Q9BWJ2 59 aa11.8□□□□□ -0.52
ZC3H4-201ENST00000253048 GAFA1Q96PS6 74 aa11.79□□□□□ -0.52
ZC3H4-201ENST00000253048 ARID2Q68CP9 1835 aa11.79□□□□□ -0.52
ZC3H4-201ENST00000253048 OR11H7Q8NGC8 314 aa11.79□□□□□ -0.52
ZC3H4-201ENST00000253048 IGHV2-70DA0A0C4DH43 119 aa11.79□□□□□ -0.52
ZC3H4-201ENST00000253048 TRGC2P03986 189 aa11.79□□□□□ -0.52
ZC3H4-201ENST00000253048 TMEM144Q7Z5S9 345 aa11.79□□□□□ -0.52
ZC3H4-201ENST00000253048 DAZ1Q9NQZ3 744 aaKnown RBP11.79□□□□□ -0.52
ZC3H4-201ENST00000253048 NDUFA3O95167 84 aa11.79□□□□□ -0.52
ZC3H4-201ENST00000253048 C17orf82Q86X59 251 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms