RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 WT1-ASQ06250 92 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 IL15RAQ13261 267 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 LRRC37A5PQ49AS3 106 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 C19orf35Q6ZS72 473 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 NOXA1Q86UR1 476 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 TMEM61Q8N0U2 210 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 OR2C3Q8N628 320 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 ZNF114Q8NC26 417 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 U3KQ87 197 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 REG1AP05451 166 aa10.29□□□□□ -0.76
DDX39A-201ENST00000242776 CRYGCP07315 174 aa10.29□□□□□ -0.76
DDX39A-201ENST00000242776 AREGP15514 252 aa10.29□□□□□ -0.76
DDX39A-201ENST00000242776 CTRB1P17538 263 aa10.29□□□□□ -0.76
DDX39A-201ENST00000242776 ATP5IP56385 69 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-201ENST00000242776 TAS2R30P59541 319 aa10.29□□□□□ -0.76
DDX39A-201ENST00000242776 DEFB135Q30KP9 77 aa10.29□□□□□ -0.76
DDX39A-201ENST00000242776 CTRB2Q6GPI1 263 aa10.29□□□□□ -0.76
DDX39A-201ENST00000242776 AKAP14Q86UN6 197 aa10.29□□□□□ -0.76
DDX39A-201ENST00000242776 SLC24A4Q8NFF2 622 aa10.29□□□□□ -0.76
DDX39A-201ENST00000242776 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.28□□□□□ -0.76
DDX39A-201ENST00000242776 ZNF320A2RRD8 509 aa10.28□□□□□ -0.76
DDX39A-201ENST00000242776 CORTO00230 105 aa10.28□□□□□ -0.76
DDX39A-201ENST00000242776 CCNKO75909 580 aa10.28□□□□□ -0.76
DDX39A-201ENST00000242776 MPC2O95563 127 aa10.28□□□□□ -0.76
DDX39A-201ENST00000242776 IFNA10P01566 189 aa10.28□□□□□ -0.76
DDX39A-201ENST00000242776 HIST1H1BP16401 226 aaKnown RBP10.28□□□□□ -0.76
DDX39A-201ENST00000242776 RAB11AP62491 216 aa10.28□□□□□ -0.76
DDX39A-201ENST00000242776 OR1P1Q8NH06 330 aa10.28□□□□□ -0.76
DDX39A-201ENST00000242776 THAP6Q8TBB0 222 aa10.28□□□□□ -0.76
DDX39A-201ENST00000242776 GATAD1Q8WUU5 269 aa10.28□□□□□ -0.76
DDX39A-201ENST00000242776 SMIM8Q96KF7 97 aa10.28□□□□□ -0.76
DDX39A-201ENST00000242776 ZC4H2Q9NQZ6 224 aa10.28□□□□□ -0.76
DDX39A-201ENST00000242776 TECRQ9NZ01 308 aaKnown RBP10.28□□□□□ -0.76
DDX39A-201ENST00000242776 PSENENQ9NZ42 101 aa10.28□□□□□ -0.76
DDX39A-201ENST00000242776 UBQLN2Q9UHD9 624 aa10.28□□□□□ -0.76
DDX39A-201ENST00000242776 F11RQ9Y624 299 aaKnown RBP10.28□□□□□ -0.76
DDX39A-201ENST00000242776 KIAA1109Q2LD37 5005 aa10.28□□□□□ -0.76
DDX39A-201ENST00000242776 FAM223BA6NKX1 122 aa10.27□□□□□ -0.77
DDX39A-201ENST00000242776 E5RGE8 158 aa10.27□□□□□ -0.77
DDX39A-201ENST00000242776 SPRY2O43597 315 aa10.27□□□□□ -0.77
DDX39A-201ENST00000242776 TSC22D2O75157 780 aa10.27□□□□□ -0.77
DDX39A-201ENST00000242776 CBLN1P23435 193 aa10.27□□□□□ -0.77
DDX39A-201ENST00000242776 NPY1RP25929 384 aa10.27□□□□□ -0.77
DDX39A-201ENST00000242776 C15orf32Q32M92 178 aa10.27□□□□□ -0.77
DDX39A-201ENST00000242776 TM4SF20Q53R12 229 aa10.27□□□□□ -0.77
DDX39A-201ENST00000242776 BTNL8Q6UX41 500 aa10.27□□□□□ -0.77
DDX39A-201ENST00000242776 FAM223AQ8IWN6 122 aa10.27□□□□□ -0.77
DDX39A-201ENST00000242776 OR2T35Q8NGX2 323 aa10.27□□□□□ -0.77
DDX39A-201ENST00000242776 THYN1Q9P016 225 aa10.27□□□□□ -0.77
DDX39A-201ENST00000242776 MLXQ9UH92 298 aa10.27□□□□□ -0.77
DDX39A-201ENST00000242776 STRAPQ9Y3F4 350 aaKnown RBP10.27□□□□□ -0.77
DDX39A-201ENST00000242776 RYR1P21817 5038 aa10.26□□□□□ -0.77
DDX39A-201ENST00000242776 GGCTO75223 188 aaKnown RBP10.26□□□□□ -0.77
DDX39A-201ENST00000242776 RNASE2P10153 161 aaKnown RBP10.26□□□□□ -0.77
DDX39A-201ENST00000242776 BSXQ3C1V8 233 aa10.26□□□□□ -0.77
DDX39A-201ENST00000242776 C2orf83Q53S99 150 aa10.26□□□□□ -0.77
DDX39A-201ENST00000242776 SPANXN5Q5MJ07 72 aa10.26□□□□□ -0.77
DDX39A-201ENST00000242776 SLC25A24Q6NUK1 477 aa10.26□□□□□ -0.77
DDX39A-201ENST00000242776 PRSS54Q6PEW0 395 aa10.26□□□□□ -0.77
DDX39A-201ENST00000242776 CLEC19AQ6UXS0 136 aa10.26□□□□□ -0.77
DDX39A-201ENST00000242776 PHLDA1Q8WV24 401 aaPredicted RBP10.26□□□□□ -0.77
DDX39A-201ENST00000242776 PAIP2BQ9ULR5 123 aaKnown RBP10.26□□□□□ -0.77
DDX39A-201ENST00000242776 H3BP45 60 aa10.25□□□□□ -0.77
DDX39A-201ENST00000242776 NDUFB8O95169 186 aa10.25□□□□□ -0.77
DDX39A-201ENST00000242776 P2RY1P47900 373 aa10.25□□□□□ -0.77
DDX39A-201ENST00000242776 CAV2P51636 162 aa10.25□□□□□ -0.77
DDX39A-201ENST00000242776 OR5AC2Q9NZP5 309 aa10.25□□□□□ -0.77
DDX39A-201ENST00000242776 MBD2Q9UBB5 411 aa10.25□□□□□ -0.77
DDX39A-201ENST00000242776 DMRT1Q9Y5R6 373 aa10.25□□□□□ -0.77
DDX39A-201ENST00000242776 IFNA4P05014 189 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 RPL35AP18077 110 aaKnown RBP10.24□□□□□ -0.77
DDX39A-201ENST00000242776 BMI1P35226 326 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 ARL3P36405 182 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 NUP62P37198 522 aaPredicted RBP10.24□□□□□ -0.77
DDX39A-201ENST00000242776 PAX9P55771 341 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 PRR20EP86478 221 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 PRR20CP86479 221 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 PRR20DP86480 221 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 PRR20BP86481 221 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 PRR20AP86496 221 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 STX12Q86Y82 276 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 TCTE3Q8IZS6 198 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 NECAP1Q8NC96 275 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 RNASEH2CQ8TDP1 164 aaKnown RBP10.24□□□□□ -0.77
DDX39A-201ENST00000242776 MISP3Q96FF7 219 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 SLC25A31Q9H0C2 315 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 C11orf1Q9H5F2 150 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 LYRM2Q9NU23 88 aaPredicted RBP10.24□□□□□ -0.77
DDX39A-201ENST00000242776 FBXL7Q9UJT9 491 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 VPS13DQ5THJ4 4388 aa10.24□□□□□ -0.77
DDX39A-201ENST00000242776 IGLV11-55A0A075B6I3 123 aa10.23□□□□□ -0.77
DDX39A-201ENST00000242776 TRAV14DV4A0A0A6YYC5 116 aa10.23□□□□□ -0.77
DDX39A-201ENST00000242776 TRBV9A0A0B4J1U6 114 aa10.23□□□□□ -0.77
DDX39A-201ENST00000242776 RPS10-NUDT3A0A1W2PQS6 291 aa10.23□□□□□ -0.77
DDX39A-201ENST00000242776 TMEM213A2RRL7 107 aa10.23□□□□□ -0.77
DDX39A-201ENST00000242776 C15orf62A8K5M9 175 aa10.23□□□□□ -0.77
DDX39A-201ENST00000242776 H0YIZ8 118 aa10.23□□□□□ -0.77
DDX39A-201ENST00000242776 SLC25A4P12235 298 aa10.23□□□□□ -0.77
DDX39A-201ENST00000242776 KLK9Q2XQG4 91 aa10.23□□□□□ -0.77
DDX39A-201ENST00000242776 LGALS9CQ6DKI2 356 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms