RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 TMEM116Q8NCL8 245 aa13.5□□□□□ -0.25
GAPDH-201ENST00000229239 OR1L6Q8NGR2 347 aa13.5□□□□□ -0.25
GAPDH-201ENST00000229239 TMEM37Q8WXS4 190 aa13.5□□□□□ -0.25
GAPDH-201ENST00000229239 DERL1Q9BUN8 251 aa13.5□□□□□ -0.25
GAPDH-201ENST00000229239 MALRD1Q5VYJ5 2156 aa13.5□□□□□ -0.25
GAPDH-201ENST00000229239 OOSP1A8MZH6 123 aa13.49□□□□□ -0.25
GAPDH-201ENST00000229239 PHOX2AO14813 284 aa13.49□□□□□ -0.25
GAPDH-201ENST00000229239 TRGC1P0CF51 173 aa13.49□□□□□ -0.25
GAPDH-201ENST00000229239 GATA2P23769 480 aaPredicted RBP13.49□□□□□ -0.25
GAPDH-201ENST00000229239 C10orf113Q5VZT2 155 aa13.49□□□□□ -0.25
GAPDH-201ENST00000229239 TMEM190Q8WZ59 177 aa13.49□□□□□ -0.25
GAPDH-201ENST00000229239 ZNF503Q96F45 646 aa13.49□□□□□ -0.25
GAPDH-201ENST00000229239 PITPNC1Q9UKF7 332 aa13.49□□□□□ -0.25
GAPDH-201ENST00000229239 POLQO75417 2590 aa13.48□□□□□ -0.25
GAPDH-201ENST00000229239 IGKV1D-37A0A075B6S9 117 aa13.48□□□□□ -0.25
GAPDH-201ENST00000229239 S100A2P29034 98 aa13.48□□□□□ -0.25
GAPDH-201ENST00000229239 OR10G8Q8NGN5 311 aa13.48□□□□□ -0.25
GAPDH-201ENST00000229239 FRZBQ92765 325 aa13.48□□□□□ -0.25
GAPDH-201ENST00000229239 F11RQ9Y624 299 aaKnown RBP13.48□□□□□ -0.25
GAPDH-201ENST00000229239 CSMD2Q7Z408 3487 aa13.48□□□□□ -0.25
GAPDH-201ENST00000229239 OTOGQ6ZRI0 2925 aa13.48□□□□□ -0.25
GAPDH-201ENST00000229239 HELTA6NFD8 242 aa13.48□□□□□ -0.25
GAPDH-201ENST00000229239 GPR6P46095 362 aaPredicted RBP13.48□□□□□ -0.25
GAPDH-201ENST00000229239 RPL19P84098 196 aaKnown RBP13.48□□□□□ -0.25
GAPDH-201ENST00000229239 NECAP1Q8NC96 275 aa13.48□□□□□ -0.25
GAPDH-201ENST00000229239 GAR1Q9NY12 217 aaKnown RBP13.48□□□□□ -0.25
GAPDH-201ENST00000229239 AKAP9Q99996 3911 aa13.47□□□□□ -0.25
GAPDH-201ENST00000229239 TRBV20OR9-2A0A075B6H5 130 aa13.47□□□□□ -0.25
GAPDH-201ENST00000229239 A0A1W2PPQ1 181 aa13.47□□□□□ -0.25
GAPDH-201ENST00000229239 ODF3BA8MYP8 253 aa13.47□□□□□ -0.25
GAPDH-201ENST00000229239 CNTFRP26992 372 aa13.47□□□□□ -0.25
GAPDH-201ENST00000229239 KRTAP10-9P60411 292 aa13.47□□□□□ -0.25
GAPDH-201ENST00000229239 CCDC144NLQ6NUI1 221 aa13.47□□□□□ -0.25
GAPDH-201ENST00000229239 TEX38Q6PEX7 206 aa13.47□□□□□ -0.25
GAPDH-201ENST00000229239 LURAP1LQ8IV03 231 aa13.47□□□□□ -0.25
GAPDH-201ENST00000229239 OR4X1Q8NH49 305 aa13.47□□□□□ -0.25
GAPDH-201ENST00000229239 OCC1Q8TAD7 63 aa13.47□□□□□ -0.25
GAPDH-201ENST00000229239 FAM167A-AS1Q96KT0 104 aa13.47□□□□□ -0.25
GAPDH-201ENST00000229239 TNFRSF19Q9NS68 423 aa13.47□□□□□ -0.25
GAPDH-201ENST00000229239 TEX22C9J3V5 150 aa13.46□□□□□ -0.25
GAPDH-201ENST00000229239 DLX1P56177 255 aa13.46□□□□□ -0.25
GAPDH-201ENST00000229239 PERPQ96FX8 193 aa13.46□□□□□ -0.25
GAPDH-201ENST00000229239 SLC25A2Q9BXI2 301 aa13.46□□□□□ -0.25
GAPDH-201ENST00000229239 TIMM23O14925 209 aa13.46□□□□□ -0.26
GAPDH-201ENST00000229239 LY6HO94772 140 aa13.46□□□□□ -0.26
GAPDH-201ENST00000229239 REG1AP05451 166 aa13.46□□□□□ -0.26
GAPDH-201ENST00000229239 OR10J4P0C629 311 aa13.46□□□□□ -0.26
GAPDH-201ENST00000229239 GNG4P50150 75 aa13.46□□□□□ -0.26
GAPDH-201ENST00000229239 PLP1P60201 277 aa13.46□□□□□ -0.26
GAPDH-201ENST00000229239 ARF6P62330 175 aa13.46□□□□□ -0.26
GAPDH-201ENST00000229239 UBE2L3P68036 154 aaKnown RBP13.46□□□□□ -0.26
GAPDH-201ENST00000229239 NPBQ8NG41 125 aa13.46□□□□□ -0.26
GAPDH-201ENST00000229239 OR5T1Q8NG75 326 aa13.46□□□□□ -0.26
GAPDH-201ENST00000229239 SRSF12Q8WXF0 261 aaKnown RBP13.46□□□□□ -0.26
GAPDH-201ENST00000229239 MISP3Q96FF7 219 aa13.46□□□□□ -0.26
GAPDH-201ENST00000229239 EAF1Q96JC9 268 aaPredicted RBP13.46□□□□□ -0.26
GAPDH-201ENST00000229239 ELOVL1Q9BW60 279 aa13.46□□□□□ -0.26
GAPDH-201ENST00000229239 A6NNC1 897 aa13.45□□□□□ -0.26
GAPDH-201ENST00000229239 FABP1P07148 127 aa13.45□□□□□ -0.26
GAPDH-201ENST00000229239 TAS2R60P59551 318 aa13.45□□□□□ -0.26
GAPDH-201ENST00000229239 TIGITQ495A1 244 aa13.45□□□□□ -0.26
GAPDH-201ENST00000229239 COA6Q5JTJ3 125 aaKnown RBP13.45□□□□□ -0.26
GAPDH-201ENST00000229239 HCP5Q6MZN7 132 aa13.45□□□□□ -0.26
GAPDH-201ENST00000229239 OR5AU1Q8NGC0 362 aa13.45□□□□□ -0.26
GAPDH-201ENST00000229239 PAXXQ9BUH6 204 aa13.45□□□□□ -0.26
GAPDH-201ENST00000229239 FBXL15Q9H469 300 aa13.45□□□□□ -0.26
GAPDH-201ENST00000229239 MOSP00540 346 aa13.44□□□□□ -0.26
GAPDH-201ENST00000229239 MFAP2P55001 183 aa13.44□□□□□ -0.26
GAPDH-201ENST00000229239 SSBP2P81877 361 aaPredicted RBP13.44□□□□□ -0.26
GAPDH-201ENST00000229239 PLGLAQ15195 96 aa13.44□□□□□ -0.26
GAPDH-201ENST00000229239 ACTL10Q5JWF8 245 aa13.44□□□□□ -0.26
GAPDH-201ENST00000229239 MINOS1Q5TGZ0 78 aa13.44□□□□□ -0.26
GAPDH-201ENST00000229239 SGMS2Q8NHU3 365 aa13.44□□□□□ -0.26
GAPDH-201ENST00000229239 CFHR4Q92496 578 aa13.44□□□□□ -0.26
GAPDH-201ENST00000229239 OR51M1Q9H341 326 aa13.44□□□□□ -0.26
GAPDH-201ENST00000229239 ZNF355PQ9NSJ1 428 aa13.44□□□□□ -0.26
GAPDH-201ENST00000229239 MINOS1-NBL1R4GNA1 71 aa13.44□□□□□ -0.26
GAPDH-201ENST00000229239 NBR2O15453 112 aa13.44□□□□□ -0.26
GAPDH-201ENST00000229239 NDUFA3O95167 84 aa13.44□□□□□ -0.26
GAPDH-201ENST00000229239 ZNF90Q03938 601 aa13.44□□□□□ -0.26
GAPDH-201ENST00000229239 PATE2Q6UY27 113 aa13.44□□□□□ -0.26
GAPDH-201ENST00000229239 MRPL36Q9P0J6 103 aaKnown RBP13.44□□□□□ -0.26
GAPDH-201ENST00000229239 ANKRD17O75179 2603 aaKnown RBP13.43□□□□□ -0.26
GAPDH-201ENST00000229239 GGTLC3B5MD39 225 aa13.43□□□□□ -0.26
GAPDH-201ENST00000229239 CRYBB3P26998 211 aa13.43□□□□□ -0.26
GAPDH-201ENST00000229239 EFNA4P52798 201 aa13.43□□□□□ -0.26
GAPDH-201ENST00000229239 HIST3H2BBQ8N257 126 aa13.43□□□□□ -0.26
GAPDH-201ENST00000229239 IL36BQ9NZH7 164 aa13.43□□□□□ -0.26
GAPDH-201ENST00000229239 CCDC168Q8NDH2 2452 aa13.43□□□□□ -0.26
GAPDH-201ENST00000229239 HYPMO75409 117 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 GOSR1O95249 250 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 SUMO1P63165 101 aaKnown RBP13.42□□□□□ -0.26
GAPDH-201ENST00000229239 PRB3Q04118 309 aaPredicted RBP13.42□□□□□ -0.26
GAPDH-201ENST00000229239 MMDQ15546 238 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 DNLZQ5SXM8 178 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 LDLRAD2Q5SZI1 272 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 OSTCQ9NRP0 149 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 CDC42EP3Q9UKI2 254 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 SPG11Q96JI7 2443 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 A0A0U1RQK1 487 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms