RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 TRAV30A0A087WSZ9 112 aa10.51□□□□□ -0.73
GPN3-201ENST00000228827 OR10J1P30954 320 aa10.51□□□□□ -0.73
GPN3-201ENST00000228827 OR1S1Q8NH92 325 aa10.51□□□□□ -0.73
GPN3-201ENST00000228827 IL17DQ8TAD2 202 aa10.51□□□□□ -0.73
GPN3-201ENST00000228827 ACY3Q96HD9 319 aa10.51□□□□□ -0.73
GPN3-201ENST00000228827 TMEM231Q9H6L2 316 aa10.51□□□□□ -0.73
GPN3-201ENST00000228827 RABAC1Q9UI14 185 aa10.51□□□□□ -0.73
GPN3-201ENST00000228827 LCE6AA0A183 80 aa10.5□□□□□ -0.73
GPN3-201ENST00000228827 CD5P06127 495 aa10.5□□□□□ -0.73
GPN3-201ENST00000228827 IGLC1P0CG04 106 aa10.5□□□□□ -0.73
GPN3-201ENST00000228827 SLC25A4P12235 298 aa10.5□□□□□ -0.73
GPN3-201ENST00000228827 VAMP1P23763 118 aa10.5□□□□□ -0.73
GPN3-201ENST00000228827 CMC4P56277 68 aaPredicted RBP10.5□□□□□ -0.73
GPN3-201ENST00000228827 SRPXP78539 464 aa10.5□□□□□ -0.73
GPN3-201ENST00000228827 Q6ZWC4 215 aa10.5□□□□□ -0.73
GPN3-201ENST00000228827 FAM24BQ8N5W8 94 aa10.5□□□□□ -0.73
GPN3-201ENST00000228827 OR1S2Q8NGQ3 325 aa10.5□□□□□ -0.73
GPN3-201ENST00000228827 NPIPB3Q92617 1050 aa10.5□□□□□ -0.73
GPN3-201ENST00000228827 HSPB7Q9UBY9 170 aa10.5□□□□□ -0.73
GPN3-201ENST00000228827 KIR2DL5BA0A0G2JN68 375 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 KIR2DL5BA0A0G2JPC4 375 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 A0A0J9YWU9 116 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 A0A1W2PS18 150 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 UBE2CO00762 179 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 CRYBB3P26998 211 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 DEFB131AP59861 70 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 RBMS2Q15434 407 aaKnown RBP10.49□□□□□ -0.73
GPN3-201ENST00000228827 TMEM128Q5BJH2 165 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 SPANXN2Q5MJ10 180 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 LEMD1Q68G75 181 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 ETFRF1Q6IPR1 90 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 NOXA1Q86UR1 476 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 KIR2DL5AQ8N109 375 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 STXBP6Q8NFX7 210 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 KIR2DL5BQ8NHK3 375 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 Q8WTZ3 238 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 NARS2Q96I59 477 aaKnown RBP10.49□□□□□ -0.73
GPN3-201ENST00000228827 CACFD1Q9UGQ2 172 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 TP53TG1Q9Y2A0 90 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 P2RY1P47900 373 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 LYG2Q86SG7 212 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 RNF183Q96D59 192 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 SRRQ9GZT4 340 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 U3KQ87 197 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 TENM2Q9NT68 2774 aa10.49□□□□□ -0.73
GPN3-201ENST00000228827 ZNF701M0R085 212 aaPredicted RBP10.48□□□□□ -0.73
GPN3-201ENST00000228827 IFNA4P05014 189 aa10.48□□□□□ -0.73
GPN3-201ENST00000228827 IL4P05112 153 aa10.48□□□□□ -0.73
GPN3-201ENST00000228827 IAPPP10997 89 aa10.48□□□□□ -0.73
GPN3-201ENST00000228827 INPP1P49441 399 aa10.48□□□□□ -0.73
GPN3-201ENST00000228827 YPEL3P61236 119 aaPredicted RBP10.48□□□□□ -0.73
GPN3-201ENST00000228827 EWSR1Q01844 656 aaKnown RBP eCLIP10.48□□□□□ -0.73
GPN3-201ENST00000228827 PPP1R1AQ13522 171 aa10.48□□□□□ -0.73
GPN3-201ENST00000228827 PMS2P11Q13670 270 aa10.48□□□□□ -0.73
GPN3-201ENST00000228827 GRAMD2BQ96HH9 432 aa10.48□□□□□ -0.73
GPN3-201ENST00000228827 SLC25A21Q9BQT8 299 aaPredicted RBP10.48□□□□□ -0.73
GPN3-201ENST00000228827 CSTL1Q9H114 145 aa10.48□□□□□ -0.73
GPN3-201ENST00000228827 LINC00854A0A1B0GVQ3 168 aa10.47□□□□□ -0.73
GPN3-201ENST00000228827 MPTX1A8MV57 137 aa10.47□□□□□ -0.73
GPN3-201ENST00000228827 SFT2D2O95562 160 aa10.47□□□□□ -0.73
GPN3-201ENST00000228827 HNRNPCP07910 306 aaKnown RBP eCLIP10.47□□□□□ -0.73
GPN3-201ENST00000228827 USF2Q15853 346 aaPredicted RBP10.47□□□□□ -0.73
GPN3-201ENST00000228827 CENPSQ8N2Z9 138 aa10.47□□□□□ -0.73
GPN3-201ENST00000228827 PAIP2BQ9ULR5 123 aaKnown RBP10.47□□□□□ -0.73
GPN3-201ENST00000228827 TRAV2A0A0B4J234 112 aa10.46□□□□□ -0.74
GPN3-201ENST00000228827 DUXBA0A1W2PPF3 345 aa10.46□□□□□ -0.74
GPN3-201ENST00000228827 HOXB5P09067 269 aa10.46□□□□□ -0.74
GPN3-201ENST00000228827 RD3LP0DJH9 198 aa10.46□□□□□ -0.74
GPN3-201ENST00000228827 BAK1Q16611 211 aa10.46□□□□□ -0.74
GPN3-201ENST00000228827 TRIQKQ629K1 86 aa10.46□□□□□ -0.74
GPN3-201ENST00000228827 DEDD2Q8WXF8 326 aa10.46□□□□□ -0.74
GPN3-201ENST00000228827 U3KQE9 123 aa10.46□□□□□ -0.74
GPN3-201ENST00000228827 LYSTQ99698 3801 aa10.46□□□□□ -0.74
GPN3-201ENST00000228827 PIGBOS1A0A0B4J2F0 54 aa10.45□□□□□ -0.74
GPN3-201ENST00000228827 CXorf65A6NEN9 183 aa10.45□□□□□ -0.74
GPN3-201ENST00000228827 K7EQG2 157 aa10.45□□□□□ -0.74
GPN3-201ENST00000228827 PITX3O75364 302 aa10.45□□□□□ -0.74
GPN3-201ENST00000228827 TOMM40O96008 361 aa10.45□□□□□ -0.74
GPN3-201ENST00000228827 CA1P00915 261 aaPredicted RBP10.45□□□□□ -0.74
GPN3-201ENST00000228827 ZNF688P0C7X2 276 aa10.45□□□□□ -0.74
GPN3-201ENST00000228827 STHQ8IWL8 128 aa10.45□□□□□ -0.74
GPN3-201ENST00000228827 LRTM2Q8N967 370 aa10.45□□□□□ -0.74
GPN3-201ENST00000228827 MAGT1Q9H0U3 335 aa10.45□□□□□ -0.74
GPN3-201ENST00000228827 KNCNA6PVL3 124 aa10.44□□□□□ -0.74
GPN3-201ENST00000228827 JTBO76095 146 aa10.44□□□□□ -0.74
GPN3-201ENST00000228827 PSG1P11464 419 aa10.44□□□□□ -0.74
GPN3-201ENST00000228827 DHRS2Q13268 280 aa10.44□□□□□ -0.74
GPN3-201ENST00000228827 C16orf54Q6UWD8 224 aa10.44□□□□□ -0.74
GPN3-201ENST00000228827 OR51G1Q8NGK1 321 aa10.44□□□□□ -0.74
GPN3-201ENST00000228827 GLMPQ8WWB7 406 aa10.44□□□□□ -0.74
GPN3-201ENST00000228827 SLC35E1Q96K37 410 aa10.44□□□□□ -0.74
GPN3-201ENST00000228827 PBDC1Q9BVG4 233 aa10.44□□□□□ -0.74
GPN3-201ENST00000228827 FLVCR2Q9UPI3 526 aa10.44□□□□□ -0.74
GPN3-201ENST00000228827 TMED3Q9Y3Q3 217 aa10.44□□□□□ -0.74
GPN3-201ENST00000228827 HELTA6NFD8 242 aa10.43□□□□□ -0.74
GPN3-201ENST00000228827 ZFP92A6NM28 416 aa10.43□□□□□ -0.74
GPN3-201ENST00000228827 GPX4P36969 197 aaPredicted RBP10.43□□□□□ -0.74
GPN3-201ENST00000228827 EIF2B2P49770 351 aaKnown RBP10.43□□□□□ -0.74
GPN3-201ENST00000228827 GAMTQ14353 236 aa10.43□□□□□ -0.74
GPN3-201ENST00000228827 GGNBP1Q5YKI7 109 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms