RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 EIF4E3Q8N5X7 224 aaKnown RBP4.42□□□□□ -1.7
AFP-201ENST00000226359 LRTM2Q8N967 370 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 ARPC1AQ92747 370 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 SPIN2AQ99865 258 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 SPIN2BQ9BPZ2 258 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 HSPB9Q9BQS6 159 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 ATG101Q9BSB4 218 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 TOLLIPQ9H0E2 274 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 COA4Q9NYJ1 87 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 MLXQ9UH92 298 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 TMED3Q9Y3Q3 217 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 LSM5Q9Y4Y9 91 aaKnown RBP4.42□□□□□ -1.7
AFP-201ENST00000226359 WSB1Q9Y6I7 421 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 CMYA5Q8N3K9 4069 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 DSCAML1Q8TD84 2053 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 TRRAPQ9Y4A5 3859 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 IGHV7-81A0A0B4J1V7 117 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 DUXBA0A1W2PPF3 345 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 FAM90A26D6RGX4 464 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 TNFSF12O43508 249 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 BCL2L11O43521 198 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 PGLYRP1O75594 196 aaPredicted RBP4.42□□□□□ -1.7
AFP-201ENST00000226359 MEOX2P50222 304 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 POLR2GP62487 172 aaKnown RBP eCLIP4.42□□□□□ -1.7
AFP-201ENST00000226359 DEFA5Q01523 94 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 PSG5Q15238 335 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 TCTEX1D4Q5JR98 221 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 KPRPQ5T749 579 aaPredicted RBP4.42□□□□□ -1.7
AFP-201ENST00000226359 C10orf99Q6UWK7 81 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 LYZL2Q7Z4W2 148 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 ZNF645Q8N7E2 425 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 WFDC9Q8NEX5 89 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 OR4S2Q8NH73 311 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 RNASE11Q8TAA1 199 aaKnown RBP4.42□□□□□ -1.7
AFP-201ENST00000226359 OSR1Q8TAX0 266 aaPredicted RBP4.42□□□□□ -1.7
AFP-201ENST00000226359 GLYATL2Q8WU03 294 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 TCTEX1D2Q8WW35 142 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 CLCC1Q96S66 551 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 HSD17B10Q99714 261 aaKnown RBP4.42□□□□□ -1.7
AFP-201ENST00000226359 ZNF471Q9BX82 626 aaPredicted RBP4.42□□□□□ -1.7
AFP-201ENST00000226359 NKX6-2Q9C056 277 aaPredicted RBP4.42□□□□□ -1.7
AFP-201ENST00000226359 PARP12Q9H0J9 701 aaKnown RBP4.42□□□□□ -1.7
AFP-201ENST00000226359 TMEM222Q9H0R3 208 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 BIN3Q9NQY0 253 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 ZNF355PQ9NSJ1 428 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 GAB2Q9UQC2 676 aa4.42□□□□□ -1.7
AFP-201ENST00000226359 A0A0G2JLM5 398 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 FAM74A7A6NL05 159 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 F8WDY8 70 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 H0Y980 276 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 H3BUA1 57 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 JTBO76095 146 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 CA2P00918 260 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 SERPINE2P07093 398 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 CNTFRP26992 372 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 CNN1P51911 297 aaKnown RBP4.41□□□□□ -1.7
AFP-201ENST00000226359 TPPP2P59282 170 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 ZNF616Q08AN1 781 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 CATR1Q13166 79 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 FAM74A3Q4VXF1 159 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 KIAA2026Q5HYC2 2103 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 ALKAL2Q6UX46 152 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 ZNF562Q6V9R5 426 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 SIGLEC15Q6ZMC9 328 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 SELENOHQ8IZQ5 122 aaKnown RBP4.41□□□□□ -1.7
AFP-201ENST00000226359 OR1S1Q8NH92 325 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 VSTM2AQ8TAG5 236 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 IL22RA2Q969J5 263 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 UBE2E2Q96LR5 201 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 TMEM56Q96MV1 263 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 TP53RKQ96S44 253 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 RNF126Q9BV68 326 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 TMEM56-RWDD3S4R434 201 aa4.41□□□□□ -1.7
AFP-201ENST00000226359 PRSS46E5RG02 174 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 E5RGE8 158 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 TEX46H3BTG2 121 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 CYB5BO43169 146 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 CDS2O95674 445 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 PVALBP20472 110 aaPredicted RBP4.4□□□□□ -1.7
AFP-201ENST00000226359 F2RP25116 425 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 UCP1P25874 307 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 PSMB8P28062 276 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 CRIP2P52943 208 aaPredicted RBP4.4□□□□□ -1.7
AFP-201ENST00000226359 EIF5AP63241 154 aaKnown RBP4.4□□□□□ -1.7
AFP-201ENST00000226359 CX3CL1P78423 397 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 PNRC1Q12796 327 aaPredicted RBP4.4□□□□□ -1.7
AFP-201ENST00000226359 FXYD3Q14802 87 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 MSMO1Q15800 293 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 TNXAQ16473 311 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 ZNF66Q6ZN08 573 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 MMD2Q8IY49 270 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 SLC35G3Q8N808 338 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 ZNF383Q8NA42 475 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 TEX45Q8NA69 505 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 OR1N2Q8NGR9 330 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 OR51H1Q8NH63 302 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 AGMATQ9BSE5 352 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 OR5AC2Q9NZP5 309 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 NSG2Q9Y328 171 aa4.4□□□□□ -1.7
AFP-201ENST00000226359 RNF222A6NCQ9 220 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms