RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 FOXH1O75593 365 aa9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 IGHV1-8P0DP01 117 aa9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 DUTP33316 252 aaKnown RBP9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 PRRX1P54821 245 aa9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 LINC00310P59036 64 aa9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 KLRD1Q13241 179 aa9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 TMEM14EPQ6UXP3 125 aa9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 OR9G1Q8NH87 305 aa9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 LSM10Q969L4 123 aaKnown RBP9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 QTRT1Q9BXR0 403 aaKnown RBP9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 GNB4Q9HAV0 340 aa9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 INSIG2Q9Y5U4 225 aa9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 CD24P25063 80 aa9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 IGFBPL1Q8WX77 278 aa9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 PIMREGQ9BSJ6 248 aa9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 KAAG1Q9UBP8 84 aa9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 ANKRD17O75179 2603 aaKnown RBP9.5□□□□□ -0.89
TNFAIP1-201ENST00000226225 IL6RP08887 468 aaPredicted RBP9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 DIAPH2-AS1Q14236 149 aa9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 OR4S2Q8NH73 311 aa9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 MRPL20Q9BYC9 149 aaKnown RBP9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 PIGBOS1A0A0B4J2F0 54 aa9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 J3QR06 171 aa9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 RRHO14718 337 aa9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 CD1BP29016 333 aa9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 TMEM155Q4W5P6 130 aa9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 TMEM133Q9H2Q1 129 aa9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 ENY2Q9NPA8 101 aa9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 FLNBO75369 2602 aaKnown RBP9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 TYMSP04818 313 aa9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 HARBI1Q96MB7 349 aa9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 NRN1Q9NPD7 142 aa9.49□□□□□ -0.89
TNFAIP1-201ENST00000226225 HRNRQ86YZ3 2850 aaPredicted RBP9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 CCL25O15444 150 aa9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 VENTXO95231 258 aa9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 APELAP0DMC3 54 aa9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 IGFBP2P18065 325 aa9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 SRIP30626 198 aa9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 Q56UQ5 140 aa9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 OR4P4Q8NGL7 312 aa9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 CLEC7AQ9BXN2 247 aa9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 YTHDF2Q9Y5A9 579 aaKnown RBP9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 FCN3O75636 299 aa9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 MMD2Q8IY49 270 aa9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 C5orf30Q96GV9 206 aa9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 K7EN84 100 aa9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 PDE6DO43924 150 aa9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 OR10J4P0C629 311 aa9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 RANP62826 216 aaKnown RBP9.48□□□□□ -0.89
TNFAIP1-201ENST00000226225 PRRC2AP48634 2157 aaKnown RBP9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 RELBQ01201 579 aa9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 VAMP3Q15836 100 aa9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 TMEM144Q7Z5S9 345 aa9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 FLYWCH2Q96CP2 140 aaKnown RBP9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 SPOCK3Q9BQ16 436 aa9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 SEPSECSQ9HD40 501 aaKnown RBP9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 ZFP30Q9Y2G7 519 aa9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 IGHV2-26A0A0B4J1V2 119 aa9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 PROP1O75360 226 aa9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 IGKV1-16P04430 117 aa9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 GATA2P23769 480 aaPredicted RBP9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 SRSF1Q07955 248 aaKnown RBP eCLIP9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 TEX43Q6ZNM6 134 aa9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 PQLC2Q6ZP29 291 aa9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 SLC25A48Q6ZT89 311 aaKnown RBP9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 CORO2AQ92828 525 aa9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 PPP1R14DQ9NXH3 145 aa9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 LAMTOR2Q9Y2Q5 125 aa9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 HCFC1P51610 2035 aa9.47□□□□□ -0.89
TNFAIP1-201ENST00000226225 M0QZ24 198 aa9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 CGB3P0DN86 165 aa9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 CGB7P0DN87 165 aa9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 CRYBB3P26998 211 aa9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 PAFAH1B2P68402 229 aa9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 SGK494Q96LW2 274 aa9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 HSPB7Q9UBY9 170 aa9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 LINC00614P0C842 121 aa9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 RPEL1Q2QD12 228 aa9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 PRR27Q6MZM9 219 aa9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 CENPVQ7Z7K6 275 aaPredicted RBP9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 ZNF596Q8TC21 504 aa9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 FAM216AQ8WUB2 273 aa9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 ADTRPQ96IZ2 230 aa9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 C20orf144Q9BQM9 153 aa9.46□□□□□ -0.89
TNFAIP1-201ENST00000226225 HYPMO75409 117 aa9.46□□□□□ -0.9
TNFAIP1-201ENST00000226225 NDUFB8O95169 186 aa9.46□□□□□ -0.9
TNFAIP1-201ENST00000226225 ZNF841Q6ZN19 808 aa9.46□□□□□ -0.9
TNFAIP1-201ENST00000226225 OR4C5Q8NGB2 326 aa9.46□□□□□ -0.9
TNFAIP1-201ENST00000226225 BORCS7Q96B45 105 aa9.46□□□□□ -0.9
TNFAIP1-201ENST00000226225 ZC2HC1AQ96GY0 325 aa9.46□□□□□ -0.9
TNFAIP1-201ENST00000226225 TMEM140Q9NV12 185 aa9.46□□□□□ -0.9
TNFAIP1-201ENST00000226225 ZFP36P26651 326 aaKnown RBP9.45□□□□□ -0.9
TNFAIP1-201ENST00000226225 HTR1DP28221 377 aa9.45□□□□□ -0.9
TNFAIP1-201ENST00000226225 FOXL1Q12952 345 aa9.45□□□□□ -0.9
TNFAIP1-201ENST00000226225 C1orf229Q6ZS94 237 aaPredicted RBP9.45□□□□□ -0.9
TNFAIP1-201ENST00000226225 MCRIP2Q9BUT9 160 aaKnown RBP9.45□□□□□ -0.9
TNFAIP1-201ENST00000226225 COMMD5Q9GZQ3 224 aa9.45□□□□□ -0.9
TNFAIP1-201ENST00000226225 TOX4O94842 621 aa9.45□□□□□ -0.9
TNFAIP1-201ENST00000226225 OR9G9P0C7N8 305 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms