RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 PGPA6NDG6 321 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 PF4V1P10720 104 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 MPZP25189 248 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 TMEM177Q53S58 311 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 RBPMS2Q6ZRY4 209 aaKnown RBP7.78□□□□□ -1.16
CCDC113-201ENST00000219299 C1QL4Q86Z23 238 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 ITLN2Q8WWU7 325 aaPredicted RBP7.78□□□□□ -1.16
CCDC113-201ENST00000219299 TMEM133Q9H2Q1 129 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 MAP1LC3AQ9H492 121 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 HSPB7Q9UBY9 170 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 TNRC6AQ8NDV7 1962 aaKnown RBP7.78□□□□□ -1.16
CCDC113-201ENST00000219299 HAX1O00165 279 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 LOXL3P58215 753 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 LY6G6FQ5SQ64 297 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 SPANXN1Q5VSR9 72 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 SAMD13Q5VXD3 122 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 HEPN1Q6WQI6 88 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 RNF126Q9BV68 326 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 PRDM13Q9H4Q3 707 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 TRBV6-7A0A0A0MS04 114 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 IGKV1D-13A0A0B4J2D9 117 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 IGKV1-13P0DP09 117 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 C3orf36Q3SXR2 165 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 KCNS1Q96KK3 526 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 REG4Q9BYZ8 158 aa7.78□□□□□ -1.16
CCDC113-201ENST00000219299 MGPP08493 103 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 GCHFRP30047 84 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 RPS20P60866 119 aaKnown RBP7.77□□□□□ -1.17
CCDC113-201ENST00000219299 SMAGPQ0VAQ4 97 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 PSMG4Q5JS54 123 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 DNM1P46Q6ZS02 220 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 TRAV40A0A0B4J280 105 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 LDLRAD4O15165 306 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 DSCR9P59020 149 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 MORN2Q502X0 79 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 UNQ5815/PRO19632Q6UWF5 114 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 DMRTC2Q8IXT2 367 aaPredicted RBP7.77□□□□□ -1.17
CCDC113-201ENST00000219299 RPUSD1Q9UJJ7 312 aaKnown RBP7.77□□□□□ -1.17
CCDC113-201ENST00000219299 IGLV3-9A0A075B6K5 115 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 HBBP68871 147 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 RTBDNQ9BSG5 229 aaPredicted RBP7.77□□□□□ -1.17
CCDC113-201ENST00000219299 MRPL20Q9BYC9 149 aaKnown RBP7.77□□□□□ -1.17
CCDC113-201ENST00000219299 ZNF430Q9H8G1 570 aaPredicted RBP7.77□□□□□ -1.17
CCDC113-201ENST00000219299 F11RQ9Y624 299 aaKnown RBP7.77□□□□□ -1.17
CCDC113-201ENST00000219299 C17orf98A8MV24 154 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 POLQO75417 2590 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 IGKV1D-33P01593 117 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 IGKV1-33P01594 117 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 IL4P05112 153 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 NUTF2P61970 127 aaKnown RBP7.77□□□□□ -1.17
CCDC113-201ENST00000219299 CENPWQ5EE01 88 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 MRPL32Q9BYC8 188 aaKnown RBP7.77□□□□□ -1.17
CCDC113-201ENST00000219299 FBXL15Q9H469 300 aa7.77□□□□□ -1.17
CCDC113-201ENST00000219299 RAB9AP51151 201 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 TMEM200BQ69YZ2 307 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 ZNF324BQ6AW86 544 aaPredicted RBP7.76□□□□□ -1.17
CCDC113-201ENST00000219299 HIST3H2BBQ8N257 126 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 HIST1H2BLQ99880 126 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 YPEL1O60688 119 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 CD5P06127 495 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 STAG3L3P0CL85 134 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 HSPE1P61604 102 aaKnown RBP7.76□□□□□ -1.17
CCDC113-201ENST00000219299 FBLN7Q53RD9 439 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 TCF24Q7RTU0 167 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.76□□□□□ -1.17
CCDC113-201ENST00000219299 OR4A5Q8NH83 315 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 YPEL2Q96QA6 119 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 METTL26Q96S19 204 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 IGKV3-7A0A075B6H7 116 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 B4DSR2 109 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 RNF223E7ERA6 249 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 ICAM4Q14773 271 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 SPCS1Q9Y6A9 102 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 BEND2Q8NDZ0 799 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 VCX2Q9H322 139 aa7.76□□□□□ -1.17
CCDC113-201ENST00000219299 SHISA9B4DS77 424 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 LINC00614P0C842 121 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 RPL23P62829 140 aaKnown RBP7.75□□□□□ -1.17
CCDC113-201ENST00000219299 FAM106AQ4KMX7 169 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 WDR86Q86TI4 376 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 IMMP2LQ96T52 175 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 RABAC1Q9UI14 185 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 SAA2-SAA4A0A096LPE2 208 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 REG1AP05451 166 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 SAA2P0DJI9 122 aaPredicted RBP7.75□□□□□ -1.17
CCDC113-201ENST00000219299 MFAP4P55083 255 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 AMMECR1LQ6DCA0 310 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 EBLN2Q6P2I7 272 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 Q6P435 159 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 COQ2Q96H96 371 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 GAFA1Q96PS6 74 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 WNK1Q9H4A3 2382 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 EMP1P54849 157 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 C2orf88Q9BSF0 95 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 DERL1Q9BUN8 251 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 NRN1Q9NPD7 142 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 DLEU1O43261 78 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 NAPSAO96009 420 aa7.75□□□□□ -1.17
CCDC113-201ENST00000219299 IGHV3-48P01763 117 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms