RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 HIST1H1EP10412 219 aaKnown RBP10.72□□□□□ -0.69
SRP54-201ENST00000216774 MFAP2P55001 183 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 C10orf55Q5SWW7 151 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 LINC00305Q7Z4B0 112 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 NUDT10Q8NFP7 164 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 TSKUQ8WUA8 353 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 H1FXQ92522 213 aaKnown RBP10.72□□□□□ -0.69
SRP54-201ENST00000216774 NUDT11Q96G61 164 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 SSBP3Q9BWW4 388 aaPredicted RBP10.72□□□□□ -0.69
SRP54-201ENST00000216774 PLCE1Q9P212 2302 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 PVRIGQ6DKI7 326 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 ATP5L2Q7Z4Y8 100 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 NIT1Q86X76 327 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 NUP35Q8NFH5 326 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 C18orf32Q8TCD1 76 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 PERPQ96FX8 193 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 DPRXA6NFQ7 191 aa10.71□□□□□ -0.69
SRP54-201ENST00000216774 CRYGCP07315 174 aa10.71□□□□□ -0.69
SRP54-201ENST00000216774 LGALS7P47929 136 aa10.71□□□□□ -0.69
SRP54-201ENST00000216774 KLF5Q13887 457 aaPredicted RBP10.71□□□□□ -0.69
SRP54-201ENST00000216774 DIAPH2-AS1Q14236 149 aa10.71□□□□□ -0.69
SRP54-201ENST00000216774 SSX8Q7RTT4 187 aa10.71□□□□□ -0.69
SRP54-201ENST00000216774 SPACA3Q8IXA5 215 aa10.71□□□□□ -0.69
SRP54-201ENST00000216774 C7orf69Q9H7B7 122 aa10.71□□□□□ -0.69
SRP54-201ENST00000216774 KLF12Q9Y4X4 402 aa10.71□□□□□ -0.69
SRP54-201ENST00000216774 TRAV34A0A0B4J273 112 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 A0A1W2PPI3 338 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 OR2J3O76001 311 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 C3orf79P0CE67 100 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 G0S2P27469 103 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 DLX6P56179 175 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 UBE2G1P62253 170 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 WFDC8Q8IUA0 241 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 TRGV9Q99603 122 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 MRPL36Q9P0J6 103 aaKnown RBP10.7□□□□□ -0.7
SRP54-201ENST00000216774 EPDR1Q9UM22 224 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 SLC25A17O43808 307 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 ZNF25P17030 456 aaPredicted RBP10.7□□□□□ -0.7
SRP54-201ENST00000216774 CA7P43166 264 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 BSPH1Q075Z2 132 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 GAGE1Q13065 139 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 SPATA45Q537H7 98 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 C22orf15Q8WYQ4 148 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 BORCS7Q96B45 105 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 TNFRSF19Q9NS68 423 aa10.7□□□□□ -0.7
SRP54-201ENST00000216774 ASPMQ8IZT6 3477 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 BOD1L1Q8NFC6 3051 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 A0A0G2JNJ9 132 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 IGLC7A0M8Q6 106 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 IGHV3-48P01763 117 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 LOXP28300 417 aaPredicted RBP10.69□□□□□ -0.7
SRP54-201ENST00000216774 MRGPRG-AS1Q2M3A8 158 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 TMEM155Q4W5P6 130 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 TEX45Q8NA69 505 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 CCL17Q92583 94 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 KAAG1Q9UBP8 84 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 UQCR10Q9UDW1 63 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 Q9UFV3 132 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 HIGD1CA8MV81 97 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 C22orf46C9J442 243 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 GDF5OSQ5U4N7 250 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 LYPD2Q6UXB3 125 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 GPR82Q96P67 336 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 TMEM208Q9BTX3 173 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 TPSG1Q9NRR2 321 aa10.69□□□□□ -0.7
SRP54-201ENST00000216774 VSTM5A8MXK1 200 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 K7EM74 188 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 SLC25A5P05141 298 aaKnown RBP10.68□□□□□ -0.7
SRP54-201ENST00000216774 THBDP07204 575 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 ORM2P19652 201 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 GNG5P63218 68 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 PRR27Q6MZM9 219 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 FAM19A2Q8N3H0 131 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 TMEM116Q8NCL8 245 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 ALKBH7Q9BT30 221 aaPredicted RBP10.68□□□□□ -0.7
SRP54-201ENST00000216774 OTOGLQ3ZCN5 2332 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 A0A1B0GXF2 115 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 DLEU1O43261 78 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 IGHV1-8P0DP01 117 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 PAX2Q02962 417 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 PMCHL1Q16048 86 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 CT83Q5H943 113 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 COL5A1-AS1Q5SY13 56 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 ZNF841Q6ZN19 808 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 KLHDC1Q8N7A1 406 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 OR1B1Q8NGR6 318 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 FMC1Q96HJ9 113 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 MLST8Q9BVC4 326 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 LPAR2Q9HBW0 351 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 CTSZQ9UBR2 303 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 ICE1Q9Y2F5 2266 aa10.68□□□□□ -0.7
SRP54-201ENST00000216774 CORTO00230 105 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 PRRG2O14669 202 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 HYPMO75409 117 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 HSBP1O75506 76 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 PLAUP00749 431 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 NBEAP1P0C6P0 100 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 IGLC2P0DOY2 106 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 IGLC3P0DOY3 106 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 NTF3P20783 257 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms