RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 TIMM23BQ5SRD1 257 aa12.23□□□□□ -0.45
EFNB1-201ENST00000204961 DDB2Q92466 427 aa12.23□□□□□ -0.45
EFNB1-201ENST00000204961 ZNF430Q9H8G1 570 aaPredicted RBP12.23□□□□□ -0.45
EFNB1-201ENST00000204961 TMEM14BQ9NUH8 114 aa12.23□□□□□ -0.45
EFNB1-201ENST00000204961 hADV38S2A0JD32 116 aa12.23□□□□□ -0.45
EFNB1-201ENST00000204961 DIRC3C9JPN6 131 aa12.23□□□□□ -0.45
EFNB1-201ENST00000204961 KLF17Q5JT82 389 aaPredicted RBP12.23□□□□□ -0.45
EFNB1-201ENST00000204961 Q6ZN92 141 aa12.23□□□□□ -0.45
EFNB1-201ENST00000204961 LINC01560Q8TB33 94 aa12.23□□□□□ -0.45
EFNB1-201ENST00000204961 ABHD17AQ96GS6 310 aa12.23□□□□□ -0.45
EFNB1-201ENST00000204961 BSNQ9UPA5 3926 aa12.23□□□□□ -0.45
EFNB1-201ENST00000204961 PGPA6NDG6 321 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 F2RL2O00254 374 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 MPDU1O75352 247 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 TMEM144Q7Z5S9 345 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 ZNF331Q9NQX6 463 aaPredicted RBP12.22□□□□□ -0.45
EFNB1-201ENST00000204961 AMMECR1Q9Y4X0 333 aaPredicted RBP12.22□□□□□ -0.45
EFNB1-201ENST00000204961 HIVEP3Q5T1R4 2406 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 FAM87AP0C7U9 286 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 TPTE2P1Q5T6R2 138 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 LINC00305Q7Z4B0 112 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 ZNF714Q96N38 554 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 PARD6GQ9BYG4 376 aaPredicted RBP12.22□□□□□ -0.45
EFNB1-201ENST00000204961 V9GYV3 84 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 POLQO75417 2590 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 TMSB15BA0A087X1C1 80 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 SLAQ13239 276 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 GUSBP1Q15486 140 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 SPATA45Q537H7 98 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 C1orf185Q5T7R7 199 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 OR52E5Q8NH55 327 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 SLC25A33Q9BSK2 321 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 PAXXQ9BUH6 204 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 PRNDQ9UKY0 176 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 HILPDAQ9Y5L2 63 aa12.22□□□□□ -0.45
EFNB1-201ENST00000204961 USP9YO00507 2555 aaPredicted RBP12.22□□□□□ -0.45
EFNB1-201ENST00000204961 RBP4P02753 201 aa12.21□□□□□ -0.45
EFNB1-201ENST00000204961 RNASE2P10153 161 aaKnown RBP12.21□□□□□ -0.45
EFNB1-201ENST00000204961 LYZP61626 148 aa12.21□□□□□ -0.45
EFNB1-201ENST00000204961 LCN2P80188 198 aa12.21□□□□□ -0.45
EFNB1-201ENST00000204961 C10orf113Q5VZT2 155 aa12.21□□□□□ -0.45
EFNB1-201ENST00000204961 GFRALQ6UXV0 394 aa12.21□□□□□ -0.45
EFNB1-201ENST00000204961 ZNF439Q8NDP4 499 aa12.21□□□□□ -0.45
EFNB1-201ENST00000204961 RPUSD1Q9UJJ7 312 aaKnown RBP12.21□□□□□ -0.45
EFNB1-201ENST00000204961 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
EFNB1-201ENST00000204961 FAM208BQ5VWN6 2430 aa12.21□□□□□ -0.45
EFNB1-201ENST00000204961 IGHV3-23P01764 117 aa12.21□□□□□ -0.45
EFNB1-201ENST00000204961 PTTG1IPP53801 180 aa12.21□□□□□ -0.45
EFNB1-201ENST00000204961 FOXL1Q12952 345 aa12.21□□□□□ -0.45
EFNB1-201ENST00000204961 CLEC5AQ9NY25 188 aa12.21□□□□□ -0.45
EFNB1-201ENST00000204961 RNF24Q9Y225 148 aa12.21□□□□□ -0.45
EFNB1-201ENST00000204961 FAM90A27PA6NNH2 459 aa12.21□□□□□ -0.46
EFNB1-201ENST00000204961 FCN3O75636 299 aa12.21□□□□□ -0.46
EFNB1-201ENST00000204961 C8orf88P0DMB2 117 aa12.21□□□□□ -0.46
EFNB1-201ENST00000204961 TMEM108Q6UXF1 575 aa12.21□□□□□ -0.46
EFNB1-201ENST00000204961 TLN2Q9Y4G6 2542 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 ZFYVE26Q68DK2 2539 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 A0A0G2JNJ9 132 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 UBE2G1P62253 170 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 PRCDQ00LT1 54 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 NRN1Q9NPD7 142 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 Q9UFV3 132 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 COL27A1Q8IZC6 1860 aaPredicted RBP12.2□□□□□ -0.46
EFNB1-201ENST00000204961 PPIAL4EA0A075B759 164 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 NKX6-3A6NJ46 265 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 PPIAL4DF5H284 164 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 NDUFB3O43676 98 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 PPIAL4FP0DN26 164 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 PRR20EP86478 221 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 PRR20CP86479 221 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 PRR20DP86480 221 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 PRR20BP86481 221 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 PRR20AP86496 221 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 ADIPOQQ15848 244 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 ZNF788Q6ZQV5 615 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 STPG4Q8N801 248 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 PGLYRP4Q96LB8 373 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 FBXL15Q9H469 300 aa12.2□□□□□ -0.46
EFNB1-201ENST00000204961 M0QZK8 103 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 TYMSP04818 313 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 HNRNPA3P51991 378 aaKnown RBP12.19□□□□□ -0.46
EFNB1-201ENST00000204961 TCTEX1D1Q8N7M0 179 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 OR1L8Q8NGR8 309 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 FOXA2Q9Y261 457 aaPredicted RBP12.19□□□□□ -0.46
EFNB1-201ENST00000204961 C16orf97H3BN30 126 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 FXYD7P58549 80 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 CD69Q07108 199 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 COL5A1-AS1Q5SY13 56 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 UNQ5815/PRO19632Q6UWF5 114 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 C1orf162Q8NEQ5 155 aaPredicted RBP12.19□□□□□ -0.46
EFNB1-201ENST00000204961 TRGV8A0A0C4DH27 118 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 PRRG2O14669 202 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 SNAI2O43623 268 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 CNIH1O95406 144 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 LHBP01229 141 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 TAS2R45P59539 299 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 HES1Q14469 280 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 OR5B3Q8NH48 314 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 ZNF586Q9NXT0 402 aa12.19□□□□□ -0.46
EFNB1-201ENST00000204961 HSBP1O75506 76 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms