RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 HIGD1CA8MV81 97 aa16.37■□□□□ 0.21
RCN1-201ENST00000054950 H0YJW9 148 aa16.37■□□□□ 0.21
RCN1-201ENST00000054950 HSBP1O75506 76 aa16.37■□□□□ 0.21
RCN1-201ENST00000054950 FCN3O75636 299 aa16.37■□□□□ 0.21
RCN1-201ENST00000054950 MOSP00540 346 aa16.37■□□□□ 0.21
RCN1-201ENST00000054950 APELAP0DMC3 54 aa16.37■□□□□ 0.21
RCN1-201ENST00000054950 ZFP30Q9Y2G7 519 aa16.37■□□□□ 0.21
RCN1-201ENST00000054950 CNOT1A5YKK6 2376 aaKnown RBP16.37■□□□□ 0.21
RCN1-201ENST00000054950 GATA4P43694 442 aa16.36■□□□□ 0.21
RCN1-201ENST00000054950 TIMM23BQ5SRD1 257 aa16.36■□□□□ 0.21
RCN1-201ENST00000054950 RBM14Q96PK6 669 aaKnown RBP16.36■□□□□ 0.21
RCN1-201ENST00000054950 TPSG1Q9NRR2 321 aa16.36■□□□□ 0.21
RCN1-201ENST00000054950 M0R2Z0 102 aa16.36■□□□□ 0.21
RCN1-201ENST00000054950 ERHP84090 104 aaKnown RBP16.36■□□□□ 0.21
RCN1-201ENST00000054950 C21orf62-AS1Q17RA5 79 aa16.36■□□□□ 0.21
RCN1-201ENST00000054950 ZNF833PQ6ZTB9 187 aa16.36■□□□□ 0.21
RCN1-201ENST00000054950 TCF24Q7RTU0 167 aa16.36■□□□□ 0.21
RCN1-201ENST00000054950 FXYD5Q96DB9 178 aa16.36■□□□□ 0.21
RCN1-201ENST00000054950 ZNF714Q96N38 554 aa16.36■□□□□ 0.21
RCN1-201ENST00000054950 NCOR1P1Q9H4R4 102 aa16.36■□□□□ 0.21
RCN1-201ENST00000054950 CLEC5AQ9NY25 188 aa16.36■□□□□ 0.21
RCN1-201ENST00000054950 PKDREJQ9NTG1 2253 aa16.36■□□□□ 0.21
RCN1-201ENST00000054950 SELENOVP59797 346 aa16.35■□□□□ 0.21
RCN1-201ENST00000054950 FAM27E3Q08E93 113 aa16.35■□□□□ 0.21
RCN1-201ENST00000054950 FAM169BQ8N8A8 192 aa16.35■□□□□ 0.21
RCN1-201ENST00000054950 TNFRSF19Q9NS68 423 aa16.35■□□□□ 0.21
RCN1-201ENST00000054950 IGHV3-21A0A0B4J1V1 117 aa16.35■□□□□ 0.21
RCN1-201ENST00000054950 MBD3L4A6NDZ8 208 aaPredicted RBP16.35■□□□□ 0.21
RCN1-201ENST00000054950 MBD3L3A6NE82 208 aaPredicted RBP16.35■□□□□ 0.21
RCN1-201ENST00000054950 FAM181BA6NEQ2 426 aa16.35■□□□□ 0.21
RCN1-201ENST00000054950 MBD3L5A6NJ08 208 aaPredicted RBP16.35■□□□□ 0.21
RCN1-201ENST00000054950 LINC00614P0C842 121 aa16.35■□□□□ 0.21
RCN1-201ENST00000054950 IGFL2Q6UWQ7 119 aa16.35■□□□□ 0.21
RCN1-201ENST00000054950 DEFB123Q8N688 67 aa16.35■□□□□ 0.21
RCN1-201ENST00000054950 MBD3L2Q8NHZ7 208 aaPredicted RBP16.35■□□□□ 0.21
RCN1-201ENST00000054950 FAM215AQ9Y5M1 114 aa16.35■□□□□ 0.21
RCN1-201ENST00000054950 FSTL3O95633 263 aa16.34■□□□□ 0.21
RCN1-201ENST00000054950 APOA2P02652 100 aa16.34■□□□□ 0.21
RCN1-201ENST00000054950 ORM2P19652 201 aa16.34■□□□□ 0.21
RCN1-201ENST00000054950 LINC00322Q6ZN03 302 aaPredicted RBP16.34■□□□□ 0.21
RCN1-201ENST00000054950 LINC00305Q7Z4B0 112 aa16.34■□□□□ 0.21
RCN1-201ENST00000054950 OR2D3Q8NGH3 330 aa16.34■□□□□ 0.21
RCN1-201ENST00000054950 GRAMD2BQ96HH9 432 aa16.34■□□□□ 0.21
RCN1-201ENST00000054950 RITA1Q96K30 269 aa16.34■□□□□ 0.21
RCN1-201ENST00000054950 PRB4P10163 310 aaPredicted RBP16.34■□□□□ 0.21
RCN1-201ENST00000054950 UNQ5815/PRO19632Q6UWF5 114 aa16.34■□□□□ 0.21
RCN1-201ENST00000054950 ALKBH7Q9BT30 221 aaPredicted RBP16.34■□□□□ 0.21
RCN1-201ENST00000054950 ZNF430Q9H8G1 570 aaPredicted RBP16.34■□□□□ 0.21
RCN1-201ENST00000054950 ST6GALNAC6Q969X2 333 aa16.33■□□□□ 0.21
RCN1-201ENST00000054950 FLYWCH2Q96CP2 140 aaKnown RBP16.33■□□□□ 0.21
RCN1-201ENST00000054950 LINC00574Q9H8X3 128 aa16.33■□□□□ 0.21
RCN1-201ENST00000054950 hADV38S2A0JD32 116 aa16.33■□□□□ 0.2
RCN1-201ENST00000054950 TSPOP30536 169 aa16.33■□□□□ 0.2
RCN1-201ENST00000054950 FOXA3P55318 350 aaPredicted RBP16.33■□□□□ 0.2
RCN1-201ENST00000054950 OSR1Q8TAX0 266 aaPredicted RBP16.33■□□□□ 0.2
RCN1-201ENST00000054950 WIPF2Q8TF74 440 aaPredicted RBP16.33■□□□□ 0.2
RCN1-201ENST00000054950 CACNG8Q8WXS5 425 aa16.33■□□□□ 0.2
RCN1-201ENST00000054950 URB1-AS1Q96HZ7 61 aa16.33■□□□□ 0.2
RCN1-201ENST00000054950 C7orf69Q9H7B7 122 aa16.33■□□□□ 0.2
RCN1-201ENST00000054950 MRPL27Q9P0M9 148 aaKnown RBP16.33■□□□□ 0.2
RCN1-201ENST00000054950 TCRBV4S1A1TA0A5B7 111 aa16.33■□□□□ 0.2
RCN1-201ENST00000054950 HCP5Q6MZN7 132 aa16.33■□□□□ 0.2
RCN1-201ENST00000054950 RBMXL3Q8N7X1 1067 aaKnown RBP16.33■□□□□ 0.2
RCN1-201ENST00000054950 SAP30LQ9HAJ7 183 aa16.33■□□□□ 0.2
RCN1-201ENST00000054950 ZZEF1O43149 2961 aa16.32■□□□□ 0.2
RCN1-201ENST00000054950 SLC25A5P05141 298 aaKnown RBP16.32■□□□□ 0.2
RCN1-201ENST00000054950 LEMD1Q68G75 181 aa16.32■□□□□ 0.2
RCN1-201ENST00000054950 FAM231DQ6ZW35 169 aa16.32■□□□□ 0.2
RCN1-201ENST00000054950 Q71RC1 249 aaPredicted RBP16.32■□□□□ 0.2
RCN1-201ENST00000054950 OR1B1Q8NGR6 318 aa16.32■□□□□ 0.2
RCN1-201ENST00000054950 IGHV3-72A0A0B4J1Y9 119 aa16.32■□□□□ 0.2
RCN1-201ENST00000054950 SPAARA0A1B0GVQ0 90 aa16.32■□□□□ 0.2
RCN1-201ENST00000054950 TM4SF5O14894 197 aa16.32■□□□□ 0.2
RCN1-201ENST00000054950 IGLL1P15814 213 aa16.32■□□□□ 0.2
RCN1-201ENST00000054950 PRB3Q04118 309 aaPredicted RBP16.32■□□□□ 0.2
RCN1-201ENST00000054950 H1FXQ92522 213 aaKnown RBP16.32■□□□□ 0.2
RCN1-201ENST00000054950 LINC00312Q9Y6C7 94 aa16.32■□□□□ 0.2
RCN1-201ENST00000054950 PGPA6NDG6 321 aa16.31■□□□□ 0.2
RCN1-201ENST00000054950 C22orf46C9J442 243 aa16.31■□□□□ 0.2
RCN1-201ENST00000054950 UBE2G1P62253 170 aa16.31■□□□□ 0.2
RCN1-201ENST00000054950 LINC00173Q6ZV60 143 aa16.31■□□□□ 0.2
RCN1-201ENST00000054950 OR5AN1Q8NGI8 311 aa16.31■□□□□ 0.2
RCN1-201ENST00000054950 CSMD1Q96PZ7 3565 aa16.31■□□□□ 0.2
RCN1-201ENST00000054950 ATMQ13315 3056 aa16.31■□□□□ 0.2
RCN1-201ENST00000054950 PCNX1Q96RV3 2341 aa16.31■□□□□ 0.2
RCN1-201ENST00000054950 C2orf70A6NJV1 201 aa16.31■□□□□ 0.2
RCN1-201ENST00000054950 M0R296 226 aa16.31■□□□□ 0.2
RCN1-201ENST00000054950 SLC25A17O43808 307 aa16.31■□□□□ 0.2
RCN1-201ENST00000054950 TACC2O95359 2948 aa16.3■□□□□ 0.2
RCN1-201ENST00000054950 DLX1P56177 255 aa16.3■□□□□ 0.2
RCN1-201ENST00000054950 BPIFB3P59826 476 aa16.3■□□□□ 0.2
RCN1-201ENST00000054950 TMEM200BQ69YZ2 307 aa16.3■□□□□ 0.2
RCN1-201ENST00000054950 OR1L4Q8NGR5 311 aa16.3■□□□□ 0.2
RCN1-201ENST00000054950 OR10X1Q8NGY0 326 aa16.3■□□□□ 0.2
RCN1-201ENST00000054950 OR8B2Q96RD0 313 aa16.3■□□□□ 0.2
RCN1-201ENST00000054950 GSX1Q9H4S2 264 aaPredicted RBP16.3■□□□□ 0.2
RCN1-201ENST00000054950 A0A1W2PPI3 338 aa16.3■□□□□ 0.2
RCN1-201ENST00000054950 TMEM177Q53S58 311 aa16.3■□□□□ 0.2
RCN1-201ENST00000054950 KLHDC1Q8N7A1 406 aa16.3■□□□□ 0.2
RCN1-201ENST00000054950 OR8B3Q8NGG8 313 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms