RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 TRAV9-1A0A075B6T8 112 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 TRAV5A0A0B4J249 113 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 ORM2P19652 201 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 CNN1P51911 297 aaKnown RBP6.6□□□□□ -1.35
VAMP3-201ENST00000054666 MFAP2P55001 183 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 LGALS4P56470 323 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 ERVFC1-1P60608 527 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 S100A12P80511 92 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 RPL19P84098 196 aaKnown RBP6.6□□□□□ -1.35
VAMP3-201ENST00000054666 ACTL10Q5JWF8 245 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 OR1L6Q8NGR2 347 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 ITLN2Q8WWU7 325 aaPredicted RBP6.6□□□□□ -1.35
VAMP3-201ENST00000054666 IGHV3-21A0A0B4J1V1 117 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 K7EN84 100 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 PHOX2AO14813 284 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 HYPMO75409 117 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 FABP1P07148 127 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 PYYP10082 97 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 PDZD11Q5EBL8 140 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 MORN5Q5VZ52 161 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 C19orf35Q6ZS72 473 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 C1orf122Q6ZSJ8 110 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 VMO1Q7Z5L0 202 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 HIST3H2BBQ8N257 126 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 NIT2Q9NQR4 276 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 IL36BQ9NZH7 164 aa6.6□□□□□ -1.35
VAMP3-201ENST00000054666 A0A1W2PRD5 423 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 A0A1W2PRF3 423 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 A0A1W2PRM7 423 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 A6NNC1 897 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 OOSP1A8MZH6 123 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 GNLYP22749 145 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 UQCRFS1P47985 274 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 EFNA4P52798 201 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 RPEL1Q2QD12 228 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 MINOS1Q5TGZ0 78 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 PATE2Q6UY27 113 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 LHFPL4Q7Z7J7 247 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 CFHR4Q92496 578 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 RASL11BQ9BPW5 248 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 MINOS1-NBL1R4GNA1 71 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 RELNP78509 3460 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 HIVEP3Q5T1R4 2406 aa6.59□□□□□ -1.35
VAMP3-201ENST00000054666 SPTBN1Q01082 2364 aaKnown RBP6.59□□□□□ -1.36
VAMP3-201ENST00000054666 A0A1W2PPR1 153 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 XKRY2A2RUG3 117 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 NDUFA3O95167 84 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 MGST1P10620 155 aaKnown RBP6.58□□□□□ -1.36
VAMP3-201ENST00000054666 TAS2R60P59551 318 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 LYZP61626 148 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 LDLRAD2Q5SZI1 272 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 TMEM183AQ8IXX5 376 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 NPBQ8NG41 125 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 GPR61Q9BZJ8 451 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 WNT10AQ9GZT5 417 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 HIGD1AQ9Y241 93 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 TRAPPC1Q9Y5R8 145 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 FCN1O00602 326 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 PEX7O00628 323 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 FABP4P15090 132 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 HOXB4P17483 251 aaPredicted RBP6.58□□□□□ -1.36
VAMP3-201ENST00000054666 PLP1P60201 277 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 FXYD3Q14802 87 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 C5orf64Q2M2E5 130 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 GFI1BQ5VTD9 330 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 OR10D4PQ8NGN7 298 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 FXYD5Q96DB9 178 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 CDC42EP3Q9UKI2 254 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 KALRNO60229 2985 aa6.58□□□□□ -1.36
VAMP3-201ENST00000054666 IFITM10A6NMD0 228 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 I3L2K1 104 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 SLC17A3O00476 420 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 IGLC1P0CG04 106 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 HIST1H1BP16401 226 aaKnown RBP6.57□□□□□ -1.36
VAMP3-201ENST00000054666 OR5I1Q13606 314 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 ZNF329Q86UD4 541 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 BLNKQ8WV28 456 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 IGF2BP2-AS1Q96M15 143 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 OSTCQ9NRP0 149 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 NCOR2Q9Y618 2525 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 TMEM8BA6NDV4 472 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 NCBP2LA6PVI3 153 aaKnown RBP6.57□□□□□ -1.36
VAMP3-201ENST00000054666 NDUFS7O75251 213 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 GCGP01275 180 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 SLC25A5P05141 298 aaKnown RBP6.57□□□□□ -1.36
VAMP3-201ENST00000054666 TMEM11P17152 192 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 CD24P25063 80 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 UBE2G1P62253 170 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 IBA57Q5T440 356 aaKnown RBP6.57□□□□□ -1.36
VAMP3-201ENST00000054666 RUSC1-AS1Q66K80 236 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 ARPC1AQ92747 370 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 PACRGQ96M98 296 aaPredicted RBP6.57□□□□□ -1.36
VAMP3-201ENST00000054666 RBM14Q96PK6 669 aaKnown RBP6.57□□□□□ -1.36
VAMP3-201ENST00000054666 TBL2Q9Y4P3 447 aaKnown RBP6.57□□□□□ -1.36
VAMP3-201ENST00000054666 DMRT1Q9Y5R6 373 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 V9GYV3 84 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 ARHGAP32A7KAX9 2087 aa6.57□□□□□ -1.36
VAMP3-201ENST00000054666 IGHV2-70DA0A0C4DH43 119 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 ISLRO14498 428 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 SCGB2A1O75556 95 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms