RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 SSBP2P81877 361 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-201ENST00000011700 FAM223AQ8IWN6 122 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 VWC2LB2RUY7 222 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 VSIG10L2P0DP72 767 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 KLF17Q5JT82 389 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-201ENST00000011700 C20orf204Q6ZNR8 217 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 MYMXA0A1B0GTQ4 84 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 GZMBP10144 247 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 CCL3L1P16619 93 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 DCAF12L2Q5VW00 463 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 BIVMQ86UB2 503 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 FLG2Q5D862 2391 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-201ENST00000011700 A0A1W2PRS3 328 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 ESDP10768 282 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 TIMP3P35625 211 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 ALKBH6Q3KRA9 238 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 Q6ZVH6 145 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 ZNF479Q96JC4 524 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 Q9H3A6 140 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 RNF114Q9Y508 228 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 TRBV6-7A0A0A0MS04 114 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 C3orf36Q3SXR2 165 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 RAMP1O60894 148 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 TDGF1P13385 188 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 RBMY1FQ15415 496 aaKnown RBP5.12□□□□□ -1.59
VPS13D-201ENST00000011700 BATF2Q8N1L9 274 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 LAMTOR3Q9UHA4 124 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 PILRAQ9UKJ1 303 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 TRAV24A0A0B4J272 114 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 ATP5J2P56134 94 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 TMEM141Q96I45 108 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 RTN4RQ9BZR6 473 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 E9PQ18 207 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 CD69Q07108 199 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 FAM74A4Q5TZK3 123 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 TRBV6-6A0A0A6YYG2 114 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 CCL3P10147 92 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 RPL32P62910 135 aaKnown RBP5.12□□□□□ -1.59
VPS13D-201ENST00000011700 GAGE1Q13065 139 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 RNF125Q96EQ8 232 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 TRGV2A0A075B6R0 118 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 SNAI3Q3KNW1 292 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 SPINK9Q5DT21 86 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 ZNF497Q6ZNH5 498 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 CENPVQ7Z7K6 275 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-201ENST00000011700 PPP1R27Q86WC6 154 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 LURAP1LQ8IV03 231 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 FOXQ1Q9C009 403 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 RFNGQ9Y644 331 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 SCTP09683 121 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 PRCDQ00LT1 54 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 HEPN1Q6WQI6 88 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 CT62P0C5K7 136 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 SLAQ13239 276 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 TEX43Q6ZNM6 134 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 SP7Q8TDD2 431 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-201ENST00000011700 FAM168AQ92567 244 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 A0A1B0GTL3 188 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 HIST1H2BKO60814 126 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 TRGV3P03979 118 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 HIST1H2BJP06899 126 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 HIST1H2BOP23527 126 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 HIST1H2BBP33778 126 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 HIST1H2BDP58876 126 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 HIST1H2BCP62807 126 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 HIST2H2BEQ16778 126 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-201ENST00000011700 C9orf139Q6ZV77 190 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 HIST1H2BHQ93079 126 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 HIST1H2BNQ99877 126 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 HIST1H2BMQ99879 126 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 ZNHIT1O43257 154 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 TOMM40O96008 361 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 ZNF708P17019 499 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 RMI2Q96E14 147 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 FOXC2Q99958 501 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 ASPHD2Q6ICH7 369 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 UBL5Q9BZL1 73 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 PLSCR4Q9NRQ2 329 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 F12P00748 615 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-201ENST00000011700 ATP5G1P05496 136 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 SRP19P09132 144 aaKnown RBP5.11□□□□□ -1.59
VPS13D-201ENST00000011700 ATP5G3P48201 142 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 SPAG8Q99932 426 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-201ENST00000011700 PRSS22Q9GZN4 317 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 H0YL77 283 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 IGLV3-19P01714 112 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 ZNF250P15622 560 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 ZNF415Q09FC8 603 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 FUT5Q11128 374 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 GCSAMLQ5JQS6 135 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 PMS2CLQ68D20 193 aa5.11□□□□□ -1.59
VPS13D-201ENST00000011700 GFRA3O60609 400 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 ZG16O60844 167 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 IGFBP2P18065 325 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 C1orf194Q5T5A4 169 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 OR11H6Q8NGC7 330 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 IFI27L1Q96BM0 104 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 PLA2G3Q9NZ20 509 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 USP9XQ93008 2570 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms