RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 NHLH2Q02577 135 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 BAXQ07812 192 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 ARL16Q0P5N6 197 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 ATP6V1FQ16864 119 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 OR8G2PQ6IF36 304 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 HAPLN4Q86UW8 402 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 NDUFA11Q86Y39 141 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 C11orf44Q8N8P7 122 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 OR4X1Q8NH49 305 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 ZNF502Q8TBZ5 544 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 GAR1Q9NY12 217 aaKnown RBP9.54□□□□□ -0.88
LINC00339-213ENST00000642137 TNFSF18Q9UNG2 199 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 FXYD6-FXYD2A0A087WZ82 144 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 IGHV3-21A0A0B4J1V1 117 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 I3L521 148 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 CST7O76096 145 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 IGHV3-11P01762 117 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 C1QBP02746 253 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 NPBWR1P48145 328 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 HBG1P69891 147 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 HBG2P69892 147 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 DEFA5Q01523 94 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 GAMTQ14353 236 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 KRTAP21-3Q3LHN1 58 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 ACSM6Q6P461 480 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 C3orf56Q8N813 242 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 INO80EQ8NBZ0 244 aaPredicted RBP9.53□□□□□ -0.88
LINC00339-213ENST00000642137 TMEM116Q8NCL8 245 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 OR11H4Q8NGC9 324 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 C4orf3Q8WVX3 66 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 AQP10Q96PS8 301 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 GNB4Q9HAV0 340 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 PEF1Q9UBV8 284 aaKnown RBP9.53□□□□□ -0.88
LINC00339-213ENST00000642137 HSPB11Q9Y547 144 aa9.53□□□□□ -0.88
LINC00339-213ENST00000642137 TRAV30A0A087WSZ9 112 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 CLN5O75503 358 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 HSPB1P04792 205 aaKnown RBP9.52□□□□□ -0.89
LINC00339-213ENST00000642137 CLEC3BP05452 202 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 LGALS1P09382 135 aaKnown RBP9.52□□□□□ -0.89
LINC00339-213ENST00000642137 SLC38A11Q08AI6 406 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 KHDC1LQ5JSQ8 128 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 SHISA2Q6UWI4 295 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 ACOT7LQ6ZUV0 252 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 SLC16A13Q7RTY0 426 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 TMEM217Q8N7C4 229 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 OR1S2Q8NGQ3 325 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 SLC35E1Q96K37 410 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 CCDC140Q96MF4 163 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 MDFIQ99750 246 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 NPVFQ9HCQ7 196 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 ZC4H2Q9NQZ6 224 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 S4R3C0 116 aa9.52□□□□□ -0.89
LINC00339-213ENST00000642137 ADARB2-AS1A8MUL3 147 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 F8W735 103 aaPredicted RBP9.51□□□□□ -0.89
LINC00339-213ENST00000642137 PFDN1O60925 122 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 IGHV3-48P01763 117 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 IGHV3-23P01764 117 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 CD300CQ08708 224 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 Q56UQ5 140 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 SPSB3Q6PJ21 355 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 CLEC19AQ6UXS0 136 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 C18orf65Q6ZTR6 163 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 TMEM144Q7Z5S9 345 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 KLHL30-AS1Q8NEE0 82 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 OR5C1Q8NGR4 320 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 NPIPB3Q92617 1050 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 BSCL2Q96G97 398 aaPredicted RBP9.51□□□□□ -0.89
LINC00339-213ENST00000642137 HYLS1Q96M11 299 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 OR5B12Q96R08 314 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 MFFQ9GZY8 342 aa9.51□□□□□ -0.89
LINC00339-213ENST00000642137 MRPL36Q9P0J6 103 aaKnown RBP9.51□□□□□ -0.89
LINC00339-213ENST00000642137 ANKRD34BA5PLL1 514 aa9.5□□□□□ -0.89
LINC00339-213ENST00000642137 RNF222A6NCQ9 220 aa9.5□□□□□ -0.89
LINC00339-213ENST00000642137 NUDT19A8MXV4 375 aa9.5□□□□□ -0.89
LINC00339-213ENST00000642137 ARPC5O15511 151 aa9.5□□□□□ -0.89
LINC00339-213ENST00000642137 GNG7O60262 68 aa9.5□□□□□ -0.89
LINC00339-213ENST00000642137 SCGB2A1O75556 95 aa9.5□□□□□ -0.89
LINC00339-213ENST00000642137 CTSGP08311 255 aa9.5□□□□□ -0.89
LINC00339-213ENST00000642137 RND2P52198 227 aa9.5□□□□□ -0.89
LINC00339-213ENST00000642137 OR2F1Q13607 317 aa9.5□□□□□ -0.89
LINC00339-213ENST00000642137 VWC2Q2TAL6 325 aa9.5□□□□□ -0.89
LINC00339-213ENST00000642137 HIST2H2BDQ6DRA6 164 aa9.5□□□□□ -0.89
LINC00339-213ENST00000642137 LILRB2Q8N423 598 aa9.5□□□□□ -0.89
LINC00339-213ENST00000642137 A0A0D9SG52 128 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 A0A1W2PRX2 142 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 OR2T8A6NH00 312 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 NUPL2O15504 423 aaKnown RBP9.49□□□□□ -0.89
LINC00339-213ENST00000642137 TGOLN2O43493 480 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 GGCTO75223 188 aaKnown RBP9.49□□□□□ -0.89
LINC00339-213ENST00000642137 DFFBO76075 338 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 GPR183P32249 361 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 ARL3P36405 182 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 ZNF345Q14585 488 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 NSUN5P1Q3KNT7 163 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 TREML4Q6UXN2 200 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 C8orf86Q6ZUL3 223 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 THAP8Q8NA92 274 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 UBAC2Q8NBM4 344 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 OR11H1Q8NG94 326 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 OR1N2Q8NGR9 330 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms