RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 AARDQ4LEZ3 155 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 C19orf54Q5BKX5 351 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 Q5BKY6 102 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 PRSS54Q6PEW0 395 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 ZNF562Q6V9R5 426 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 OR10W1Q8NGF6 305 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 RAB40CQ96S21 281 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 NDUFA4L2Q9NRX3 87 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 PSENENQ9NZ42 101 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 H0YIZ8 118 aa7.66□□□□□ -1.18
PHGDH-222ENST00000641587 BOLA2-SMG1P6H3BVE0 249 aa7.66□□□□□ -1.18
PHGDH-222ENST00000641587 IFNA10P01566 189 aa7.66□□□□□ -1.18
PHGDH-222ENST00000641587 C1QBP02746 253 aa7.66□□□□□ -1.18
PHGDH-222ENST00000641587 REG1AP05451 166 aa7.66□□□□□ -1.18
PHGDH-222ENST00000641587 OR13C7P0DN81 318 aa7.66□□□□□ -1.18
PHGDH-222ENST00000641587 SNCAP37840 140 aa7.66□□□□□ -1.18
PHGDH-222ENST00000641587 ERHP84090 104 aaKnown RBP7.66□□□□□ -1.18
PHGDH-222ENST00000641587 SPANXN5Q5MJ07 72 aa7.66□□□□□ -1.18
PHGDH-222ENST00000641587 INO80EQ8NBZ0 244 aaPredicted RBP7.66□□□□□ -1.18
PHGDH-222ENST00000641587 RNF126Q9BV68 326 aa7.66□□□□□ -1.18
PHGDH-222ENST00000641587 RETNQ9HD89 108 aa7.66□□□□□ -1.18
PHGDH-222ENST00000641587 C19orf73Q9NVV2 129 aa7.66□□□□□ -1.18
PHGDH-222ENST00000641587 STRAPQ9Y3F4 350 aaKnown RBP7.66□□□□□ -1.18
PHGDH-222ENST00000641587 A0A1B0GW64 132 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 IGLC7A0M8Q6 106 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 CGB1A6NKQ9 187 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 TEX22C9J3V5 150 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 E7EUB6 86 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 G3V3Q6 166 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 ARPC5O15511 151 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 LGALS1P09382 135 aaKnown RBP7.65□□□□□ -1.18
PHGDH-222ENST00000641587 SLC25A4P12235 298 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 AREGP15514 252 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 P2RY1P47900 373 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 AP2S1P53680 142 aaPredicted RBP7.65□□□□□ -1.18
PHGDH-222ENST00000641587 RPP30P78346 268 aaKnown RBP7.65□□□□□ -1.18
PHGDH-222ENST00000641587 SSBP2P81877 361 aaPredicted RBP7.65□□□□□ -1.18
PHGDH-222ENST00000641587 TMEM267Q0VDI3 215 aaPredicted RBP7.65□□□□□ -1.18
PHGDH-222ENST00000641587 UNQ5815/PRO19632Q6UWF5 114 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 ZNF546Q86UE3 836 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 NOXA1Q86UR1 476 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 SLC24A4Q8NFF2 622 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 SMIM8Q96KF7 97 aa7.65□□□□□ -1.18
PHGDH-222ENST00000641587 FAM24AA6NFZ4 105 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 TSC22D2O75157 780 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 TMEM50AO95807 157 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 IFNA4P05014 189 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 METTL15P1P0C7V9 234 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 EGR2P11161 476 aaPredicted RBP7.64□□□□□ -1.19
PHGDH-222ENST00000641587 DEFA4P12838 97 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 NPY1RP25929 384 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 RPL12P30050 165 aaKnown RBP7.64□□□□□ -1.19
PHGDH-222ENST00000641587 HTR2BP41595 481 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 EIF2B2P49770 351 aaKnown RBP7.64□□□□□ -1.19
PHGDH-222ENST00000641587 NKX2-5P52952 324 aaPredicted RBP7.64□□□□□ -1.19
PHGDH-222ENST00000641587 SUB1P53999 127 aaKnown RBP eCLIP7.64□□□□□ -1.19
PHGDH-222ENST00000641587 TAS2R30P59541 319 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 RAB11AP62491 216 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 WT1-ASQ06250 92 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 HAGHQ16775 308 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 OR8G2PQ6IF36 304 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 HSD17B13Q7Z5P4 300 aaPredicted RBP7.64□□□□□ -1.19
PHGDH-222ENST00000641587 STX12Q86Y82 276 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 OR2C3Q8N628 320 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 LFNGQ8NES3 379 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 OR11H4Q8NGC9 324 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 HYLS1Q96M11 299 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 MS4A10Q96PG2 267 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 OR4C12Q96R67 309 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 FAM110AQ9BQ89 295 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 SRSF8Q9BRL6 282 aaKnown RBP7.64□□□□□ -1.19
PHGDH-222ENST00000641587 SLC25A31Q9H0C2 315 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 ZNF355PQ9NSJ1 428 aa7.64□□□□□ -1.19
PHGDH-222ENST00000641587 LYRM2Q9NU23 88 aaPredicted RBP7.64□□□□□ -1.19
PHGDH-222ENST00000641587 IGSF23A1L1A6 192 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 CYB5BO43169 146 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 CST7O76096 145 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 IGLV1-51P01701 117 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 PAX9P55771 341 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 C19orf35Q6ZS72 473 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 TMEM217Q8N7C4 229 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 OR5T1Q8NG75 326 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 PPP1R14BQ96C90 147 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 MISP3Q96FF7 219 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 SPATA25Q9BR10 227 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 MFFQ9GZY8 342 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 C11orf1Q9H5F2 150 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 TNFSF18Q9UNG2 199 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 U3KQ87 197 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 KMT2AQ03164 3969 aa7.63□□□□□ -1.19
PHGDH-222ENST00000641587 C15orf62A8K5M9 175 aa7.62□□□□□ -1.19
PHGDH-222ENST00000641587 HMSDA8MTL9 139 aa7.62□□□□□ -1.19
PHGDH-222ENST00000641587 A8MZ25 164 aa7.62□□□□□ -1.19
PHGDH-222ENST00000641587 INS-IGF2F8WCM5 200 aa7.62□□□□□ -1.19
PHGDH-222ENST00000641587 JTBO76095 146 aa7.62□□□□□ -1.19
PHGDH-222ENST00000641587 HSPB1P04792 205 aaKnown RBP7.62□□□□□ -1.19
PHGDH-222ENST00000641587 RNASE2P10153 161 aaKnown RBP7.62□□□□□ -1.19
PHGDH-222ENST00000641587 CRIP2P52943 208 aaPredicted RBP7.62□□□□□ -1.19
PHGDH-222ENST00000641587 TPPP2P59282 170 aa7.62□□□□□ -1.19
PHGDH-222ENST00000641587 DEFA5Q01523 94 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms