RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 DMXL2Q8TDJ6 3036 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 TRAV5A0A0B4J249 113 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 C2orf70A6NJV1 201 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 OR2J3O76001 311 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 RNASE2P10153 161 aaKnown RBP11.14□□□□□ -0.63
PAX6-280ENST00000640872 MFAP2P55001 183 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 ATP5IP56385 69 aaPredicted RBP11.14□□□□□ -0.63
PAX6-280ENST00000640872 UBE2L3P68036 154 aaKnown RBP11.14□□□□□ -0.63
PAX6-280ENST00000640872 LYG1Q8N1E2 194 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 CNEP1R1Q8N9A8 125 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 GRAMD2BQ96HH9 432 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 TRIB1Q96RU8 372 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 ALKBH7Q9BT30 221 aaPredicted RBP11.14□□□□□ -0.63
PAX6-280ENST00000640872 NCOR1P1Q9H4R4 102 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 SAP30LQ9HAJ7 183 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 TNFRSF19Q9NS68 423 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 ZNF355PQ9NSJ1 428 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 SMG1Q96Q15 3661 aaKnown RBP11.14□□□□□ -0.63
PAX6-280ENST00000640872 SPTBN2O15020 2390 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 IGHV1-18A0A0C4DH31 117 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 KBTBD11-OT1A0A1B0GTJ5 212 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 TEX50A0A1B0GTY4 177 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 IGLC7A0M8Q6 106 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 M0R2Z0 102 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 IGLL1P15814 213 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 UBE2G1P62253 170 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 CD69Q07108 199 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 MSMPQ1L6U9 139 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 Q56UQ5 140 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 SPRNQ5BIV9 151 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 VWA1Q6PCB0 445 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 ZNF738Q8NE65 137 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 OR1L8Q8NGR8 309 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 SNRNP40Q96DI7 357 aaKnown RBP11.13□□□□□ -0.63
PAX6-280ENST00000640872 OR2V2Q96R30 315 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 DSCAML1Q8TD84 2053 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 IGHV1-69-2A0A0G2JMI3 117 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 K7EP13 123 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 KIR2DL2P43627 348 aaPredicted RBP11.13□□□□□ -0.63
PAX6-280ENST00000640872 RPL8P62917 257 aaKnown RBP11.13□□□□□ -0.63
PAX6-280ENST00000640872 ANKRD39Q53RE8 183 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 MUC15Q8N387 334 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 NUDT10Q8NFP7 164 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 NUDT11Q96G61 164 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 FER1L6-AS2Q96M78 137 aa11.13□□□□□ -0.63
PAX6-280ENST00000640872 AMMECR1Q9Y4X0 333 aaPredicted RBP11.13□□□□□ -0.63
PAX6-280ENST00000640872 SRRM4A7MD48 611 aaKnown RBP11.12□□□□□ -0.63
PAX6-280ENST00000640872 GNG10P50151 68 aa11.12□□□□□ -0.63
PAX6-280ENST00000640872 SPATA12Q7Z6I5 190 aa11.12□□□□□ -0.63
PAX6-280ENST00000640872 ZNF714Q96N38 554 aa11.12□□□□□ -0.63
PAX6-280ENST00000640872 COL25A1Q9BXS0 654 aaPredicted RBP11.12□□□□□ -0.63
PAX6-280ENST00000640872 GAL3ST2Q9H3Q3 398 aa11.12□□□□□ -0.63
PAX6-280ENST00000640872 LOC105371242A0A075B767 164 aa11.12□□□□□ -0.63
PAX6-280ENST00000640872 IGKV1-16P04430 117 aa11.12□□□□□ -0.63
PAX6-280ENST00000640872 ZNF329Q86UD4 541 aa11.12□□□□□ -0.63
PAX6-280ENST00000640872 URB1-AS1Q96HZ7 61 aa11.12□□□□□ -0.63
PAX6-280ENST00000640872 C7orf69Q9H7B7 122 aa11.12□□□□□ -0.63
PAX6-280ENST00000640872 RAB9BQ9NP90 201 aa11.12□□□□□ -0.63
PAX6-280ENST00000640872 PEX7O00628 323 aa11.11□□□□□ -0.63
PAX6-280ENST00000640872 LHBP01229 141 aa11.11□□□□□ -0.63
PAX6-280ENST00000640872 GPR6P46095 362 aaPredicted RBP11.11□□□□□ -0.63
PAX6-280ENST00000640872 RNASEKQ6P5S7 137 aaKnown RBP11.11□□□□□ -0.63
PAX6-280ENST00000640872 MOGAT3Q86VF5 341 aa11.11□□□□□ -0.63
PAX6-280ENST00000640872 KIR3DL3Q8N743 410 aa11.11□□□□□ -0.63
PAX6-280ENST00000640872 TMEM178AQ8NBL3 297 aa11.11□□□□□ -0.63
PAX6-280ENST00000640872 GVINP1Q7Z2Y8 2422 aa11.11□□□□□ -0.63
PAX6-280ENST00000640872 TNCP24821 2201 aa11.11□□□□□ -0.63
PAX6-280ENST00000640872 A0A1B0GXF2 115 aa11.11□□□□□ -0.63
PAX6-280ENST00000640872 VWC2LB2RUY7 222 aa11.11□□□□□ -0.63
PAX6-280ENST00000640872 CT45A6P0DMU7 189 aa11.11□□□□□ -0.63
PAX6-280ENST00000640872 CT45A5P0DMU8 189 aa11.11□□□□□ -0.63
PAX6-280ENST00000640872 CT45A7P0DMV0 189 aa11.11□□□□□ -0.63
PAX6-280ENST00000640872 PYYP10082 97 aa11.11□□□□□ -0.63
PAX6-280ENST00000640872 C22orf15Q8WYQ4 148 aa11.11□□□□□ -0.63
PAX6-280ENST00000640872 SSBP4Q9BWG4 385 aaPredicted RBP11.11□□□□□ -0.63
PAX6-280ENST00000640872 IGHV2-70DA0A0C4DH43 119 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 FAM120AOSQ5T036 256 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 DUX4L9Q6RFH8 374 aaPredicted RBP11.1□□□□□ -0.63
PAX6-280ENST00000640872 ATP5L2Q7Z4Y8 100 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 C9orf106Q8NAJ2 232 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 OR10W1Q8NGF6 305 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 OR2D3Q8NGH3 330 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 CACNA1GO43497 2377 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 ZNF318Q5VUA4 2279 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 TANC2Q9HCD6 1990 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 SPAARA0A1B0GVQ0 90 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 HIGD1CA8MV81 97 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 IGHG3P01860 377 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 SAA1P0DJI8 122 aaPredicted RBP11.1□□□□□ -0.63
PAX6-280ENST00000640872 TNFSF4P23510 183 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 FAM201AQ5SY85 155 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 ZNF841Q6ZN19 808 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 OR2T6Q8NHC8 308 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 CACNG8Q8WXS5 425 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 CHRDL1Q9BU40 450 aa11.1□□□□□ -0.63
PAX6-280ENST00000640872 DSCAMO60469 2012 aa11.09□□□□□ -0.63
PAX6-280ENST00000640872 CEP250Q9BV73 2442 aa11.09□□□□□ -0.63
PAX6-280ENST00000640872 RP1L1Q8IWN7 2480 aaPredicted RBP11.09□□□□□ -0.63
PAX6-280ENST00000640872 A0A1W2PN81 502 aa11.09□□□□□ -0.63
PAX6-280ENST00000640872 DLL1O00548 723 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms