RNA–Protein interactions for RNA: ENST00000640521.1

MED17-227, Transcript of mediator complex subunit 17, human

TSL 5 BASIC

Gene MED17, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-227	ENST00000640521	PLXNB1	O43157	2135 aa		18.9	■□□□□ 0.62
MED17-227	ENST00000640521	NAV3	Q8IVL0	2385 aa		18.9	■□□□□ 0.62
MED17-227	ENST00000640521	TEX22	C9J3V5	150 aa		18.9	■□□□□ 0.62
MED17-227	ENST00000640521		H7BYZ3	331 aa		18.9	■□□□□ 0.62
MED17-227	ENST00000640521	IGHV3-48	P01763	117 aa		18.9	■□□□□ 0.62
MED17-227	ENST00000640521	CRYGC	P07315	174 aa		18.9	■□□□□ 0.62
MED17-227	ENST00000640521	SCO2	A0A1W2PP80	73 aa		18.89	■□□□□ 0.61
MED17-227	ENST00000640521	TCRBV4S1A1T	A0A5B7	111 aa		18.89	■□□□□ 0.61
MED17-227	ENST00000640521	PHOX2A	O14813	284 aa		18.89	■□□□□ 0.61
MED17-227	ENST00000640521	CFHR4	Q92496	578 aa		18.89	■□□□□ 0.61
MED17-227	ENST00000640521	ANAPC16	Q96DE5	110 aa		18.89	■□□□□ 0.61
MED17-227	ENST00000640521	TMEM167B	Q9NRX6	74 aa		18.89	■□□□□ 0.61
MED17-227	ENST00000640521	ARL2-SNX15	V9GYD0	113 aa		18.89	■□□□□ 0.61
MED17-227	ENST00000640521	ETFRF1	Q6IPR1	90 aa		18.88	■□□□□ 0.61
MED17-227	ENST00000640521	PQLC2	Q6ZP29	291 aa		18.88	■□□□□ 0.61
MED17-227	ENST00000640521	C1orf122	Q6ZSJ8	110 aa		18.88	■□□□□ 0.61
MED17-227	ENST00000640521	LINC01551	Q86U37	167 aa		18.88	■□□□□ 0.61
MED17-227	ENST00000640521	SLC25A33	Q9BSK2	321 aa		18.88	■□□□□ 0.61
MED17-227	ENST00000640521	MRPL32	Q9BYC8	188 aa	Known RBP	18.88	■□□□□ 0.61
MED17-227	ENST00000640521	FCN1	O00602	326 aa		18.88	■□□□□ 0.61
MED17-227	ENST00000640521	CEACAM3	P40198	252 aa		18.88	■□□□□ 0.61
MED17-227	ENST00000640521	EFNA4	P52798	201 aa		18.88	■□□□□ 0.61
MED17-227	ENST00000640521	NDUFA6	P56556	154 aa		18.88	■□□□□ 0.61
MED17-227	ENST00000640521	C19orf35	Q6ZS72	473 aa		18.88	■□□□□ 0.61
MED17-227	ENST00000640521	LHFPL4	Q7Z7J7	247 aa		18.88	■□□□□ 0.61
MED17-227	ENST00000640521	KIR3DL3	Q8N743	410 aa		18.88	■□□□□ 0.61
MED17-227	ENST00000640521	HILPDA	Q9Y5L2	63 aa		18.88	■□□□□ 0.61
MED17-227	ENST00000640521	CACNA1A	O00555	2505 aa		18.88	■□□□□ 0.61
MED17-227	ENST00000640521	APELA	P0DMC3	54 aa		18.87	■□□□□ 0.61
MED17-227	ENST00000640521	ZFP36	P26651	326 aa	Known RBP	18.87	■□□□□ 0.61
MED17-227	ENST00000640521	GALR1	P47211	349 aa		18.87	■□□□□ 0.61
MED17-227	ENST00000640521	TAS2R45	P59539	299 aa		18.87	■□□□□ 0.61
MED17-227	ENST00000640521	ZNF90	Q03938	601 aa		18.87	■□□□□ 0.61
MED17-227	ENST00000640521	OR1P1	Q8NH06	330 aa		18.87	■□□□□ 0.61
MED17-227	ENST00000640521	MISP3	Q96FF7	219 aa		18.87	■□□□□ 0.61
MED17-227	ENST00000640521	RNF2	Q99496	336 aa		18.87	■□□□□ 0.61
MED17-227	ENST00000640521	DNAJC4	Q9NNZ3	241 aa		18.87	■□□□□ 0.61
MED17-227	ENST00000640521	C8orf88	P0DMB2	117 aa		18.86	■□□□□ 0.61
MED17-227	ENST00000640521	RUSC1-AS1	Q66K80	236 aa		18.86	■□□□□ 0.61
MED17-227	ENST00000640521	FRZB	Q92765	325 aa		18.86	■□□□□ 0.61
MED17-227	ENST00000640521	C11orf52	Q96A22	123 aa		18.86	■□□□□ 0.61
MED17-227	ENST00000640521	SPTBN1	Q01082	2364 aa	Known RBP	18.86	■□□□□ 0.61
MED17-227	ENST00000640521	S100A9	P06702	114 aa	Known RBP	18.86	■□□□□ 0.61
MED17-227	ENST00000640521	CDX1	P47902	265 aa	Predicted RBP	18.86	■□□□□ 0.61
MED17-227	ENST00000640521	PAX2	Q02962	417 aa		18.86	■□□□□ 0.61
MED17-227	ENST00000640521	SRSF12	Q8WXF0	261 aa	Known RBP	18.86	■□□□□ 0.61
MED17-227	ENST00000640521	OR5B12	Q96R08	314 aa		18.86	■□□□□ 0.61
MED17-227	ENST00000640521	TACC2	O95359	2948 aa		18.86	■□□□□ 0.61
MED17-227	ENST00000640521	TRGC1	P0CF51	173 aa		18.85	■□□□□ 0.61
MED17-227	ENST00000640521	SELENOT	P62341	195 aa		18.85	■□□□□ 0.61
MED17-227	ENST00000640521	NECAP1	Q8NC96	275 aa		18.85	■□□□□ 0.61
MED17-227	ENST00000640521	FAM167A-AS1	Q96KT0	104 aa		18.85	■□□□□ 0.61
MED17-227	ENST00000640521	ELOVL1	Q9BW60	279 aa		18.85	■□□□□ 0.61
MED17-227	ENST00000640521	SRD5A3	Q9H8P0	318 aa		18.85	■□□□□ 0.61
MED17-227	ENST00000640521	F11R	Q9Y624	299 aa	Known RBP	18.85	■□□□□ 0.61
MED17-227	ENST00000640521	TRBV20OR9-2	A0A075B6H5	130 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	OR7C2	O60412	319 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	S100P	P25815	95 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	PATE2	Q6UY27	113 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	VMO1	Q7Z5L0	202 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	OR5T1	Q8NG75	326 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	UHRF2	Q96PU4	802 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	PIEZO1	Q92508	2521 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	IFITM10	A6NMD0	228 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	CD99	P14209	185 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	PLGLA	Q15195	96 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	MORN5	Q5VZ52	161 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	OR1L4	Q8NGR5	311 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	IGFBPL1	Q8WX77	278 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	PFDN5	Q99471	154 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521	SLC25A2	Q9BXI2	301 aa		18.84	■□□□□ 0.61
MED17-227	ENST00000640521		A0A1W2PRD5	423 aa		18.83	■□□□□ 0.61
MED17-227	ENST00000640521		A0A1W2PRF3	423 aa		18.83	■□□□□ 0.61
MED17-227	ENST00000640521		A0A1W2PRM7	423 aa		18.83	■□□□□ 0.61
MED17-227	ENST00000640521	CORT	O00230	105 aa		18.83	■□□□□ 0.61
MED17-227	ENST00000640521	MMD	Q15546	238 aa		18.83	■□□□□ 0.61
MED17-227	ENST00000640521	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	18.83	■□□□□ 0.61
MED17-227	ENST00000640521	PKD1L2	Q7Z442	2459 aa		18.83	■□□□□ 0.6
MED17-227	ENST00000640521	TRAV5	A0A0B4J249	113 aa		18.83	■□□□□ 0.6
MED17-227	ENST00000640521	PGPEP1L	A6NFU8	196 aa		18.83	■□□□□ 0.6
MED17-227	ENST00000640521	NBR2	O15453	112 aa		18.83	■□□□□ 0.6
MED17-227	ENST00000640521	COX7A2P2	O60397	106 aa		18.83	■□□□□ 0.6
MED17-227	ENST00000640521	TMEM116	Q8NCL8	245 aa		18.83	■□□□□ 0.6
MED17-227	ENST00000640521	NPB	Q8NG41	125 aa		18.83	■□□□□ 0.6
MED17-227	ENST00000640521	OR4X1	Q8NH49	305 aa		18.83	■□□□□ 0.6
MED17-227	ENST00000640521	DMRT1	Q9Y5R6	373 aa		18.83	■□□□□ 0.6
MED17-227	ENST00000640521	NDUFA3	O95167	84 aa		18.82	■□□□□ 0.6
MED17-227	ENST00000640521	MOS	P00540	346 aa		18.82	■□□□□ 0.6
MED17-227	ENST00000640521	SRP14	P37108	136 aa	Known RBP	18.82	■□□□□ 0.6
MED17-227	ENST00000640521	C10orf113	Q5VZT2	155 aa		18.82	■□□□□ 0.6
MED17-227	ENST00000640521	TRGV9	Q99603	122 aa		18.82	■□□□□ 0.6
MED17-227	ENST00000640521	SRSF8	Q9BRL6	282 aa	Known RBP	18.82	■□□□□ 0.6
MED17-227	ENST00000640521	TNFRSF19	Q9NS68	423 aa		18.82	■□□□□ 0.6
MED17-227	ENST00000640521	GGCT	O75223	188 aa	Known RBP	18.81	■□□□□ 0.6
MED17-227	ENST00000640521	OR10J4	P0C629	311 aa		18.81	■□□□□ 0.6
MED17-227	ENST00000640521	HOXB4	P17483	251 aa	Predicted RBP	18.81	■□□□□ 0.6
MED17-227	ENST00000640521	LGALS4	P56470	323 aa		18.81	■□□□□ 0.6
MED17-227	ENST00000640521	EAF1	Q96JC9	268 aa	Predicted RBP	18.81	■□□□□ 0.6
MED17-227	ENST00000640521	SIRPD	Q9H106	197 aa		18.81	■□□□□ 0.6
MED17-227	ENST00000640521	OVOL3	O00110	214 aa		18.8	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms