RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 C20orf24Q9BUV8 137 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 NKX6-2Q9C056 277 aaPredicted RBP4.77□□□□□ -1.65
ATM-229ENST00000639953 COA4Q9NYJ1 87 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 MRPL36Q9P0J6 103 aaKnown RBP4.77□□□□□ -1.65
ATM-229ENST00000639953 TCF19Q9Y242 345 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 TRGV10A0A0A0MS01 117 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 IGHV3-72A0A0B4J1Y9 119 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 UBE2L5PA0A1B0GUS4 154 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 LOC102723971A0A1B0GUV8 181 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 COLCA2A8K830 154 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 RNF212BA8MTL3 300 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 CEBPZOSA8MTT3 80 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 TSPAN4O14817 238 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 SOX15O60248 233 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 VENTXO95231 258 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 HPRT1P00492 218 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 PVALBP20472 110 aaPredicted RBP4.76□□□□□ -1.65
ATM-229ENST00000639953 PPT1P50897 306 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 VWC2Q2TAL6 325 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 SMUG1Q53HV7 270 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 TRAT1Q6PIZ9 186 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 C9orf47Q6ZRZ4 202 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 DYNAPQ8N1N2 210 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 SIGLECL1Q8N7X8 197 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 C11orf44Q8N8P7 122 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 ZNF596Q8TC21 504 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 DUX5Q96PT3 197 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 CLCC1Q96S66 551 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 S1PR3Q99500 378 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 SEC11CQ9BY50 192 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 ESM1Q9NQ30 184 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 FAM212BQ9NTI7 297 aaPredicted RBP4.76□□□□□ -1.65
ATM-229ENST00000639953 ZFP57Q9NU63 452 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 GAR1Q9NY12 217 aaKnown RBP4.76□□□□□ -1.65
ATM-229ENST00000639953 STRAPQ9Y3F4 350 aaKnown RBP4.76□□□□□ -1.65
ATM-229ENST00000639953 KPTNQ9Y664 436 aa4.76□□□□□ -1.65
ATM-229ENST00000639953 TNCP24821 2201 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 IGHV1-69DA0A0B4J2H0 117 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 A0A0U1RQK1 487 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 RBFOX3A6NFN3 312 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 FAM90A26D6RGX4 464 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 H0YJW9 148 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 J3QR06 171 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 TCF21O43680 179 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 CA2P00918 260 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 IGHV1-69P01742 117 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 PRH1P02810 166 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 CRYGBP07316 175 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 OR8U8P0C7N1 319 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 LINC00869P0C866 280 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 FGF7P21781 194 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 MFAP2P55001 183 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 EIF5AP63241 154 aaKnown RBP4.75□□□□□ -1.65
ATM-229ENST00000639953 CFHR3Q02985 330 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 BAXQ07812 192 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 CATR1Q13166 79 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 POU2AF1Q16633 256 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 DEFB112Q30KQ8 113 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 KRTAP24-1Q3LI83 254 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 PDLIM3Q53GG5 364 aaPredicted RBP4.75□□□□□ -1.65
ATM-229ENST00000639953 AKIRIN2Q53H80 203 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 ZNF506Q5JVG8 444 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 FAM90A2PQ658T7 463 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 HEPN1Q6WQI6 88 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 LHFPL4Q7Z7J7 247 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 KIR3DL3Q8N743 410 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 OR13D1Q8NGV5 346 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 WIPF2Q8TF74 440 aaPredicted RBP4.75□□□□□ -1.65
ATM-229ENST00000639953 SFT2D1Q8WV19 159 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 C17orf50Q8WW18 174 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 TNFRSF14Q92956 283 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 MGST2Q99735 147 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 TNFRSF19Q9NS68 423 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 SLC35D1Q9NTN3 355 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 TMEM14BQ9NUH8 114 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 LINC00312Q9Y6C7 94 aa4.75□□□□□ -1.65
ATM-229ENST00000639953 NAV3Q8IVL0 2385 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 IGKV1OR2-108A0A075B7D4 117 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 TRAV1-1A0A0B4J248 108 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 A0A1W2PPE2 198 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 hADV38S2A0JD32 116 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 C7orf77A4D0Y5 90 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 C15orf61A6NNL5 157 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 LY6LH3BQJ8 138 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 M0R1W7 72 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 FCN1O00602 326 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 PLXNB1O43157 2135 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 RBFOX2O43251 390 aaKnown RBP eCLIP4.74□□□□□ -1.65
ATM-229ENST00000639953 IGHV3-48P01763 117 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 SNRNP70P08621 437 aaKnown RBP4.74□□□□□ -1.65
ATM-229ENST00000639953 SAA1P0DJI8 122 aaPredicted RBP4.74□□□□□ -1.65
ATM-229ENST00000639953 IGHV1-8P0DP01 117 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 RNASE2P10153 161 aaKnown RBP4.74□□□□□ -1.65
ATM-229ENST00000639953 GATA2P23769 480 aaPredicted RBP4.74□□□□□ -1.65
ATM-229ENST00000639953 PRTN3P24158 256 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 COX7A1P24310 79 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 S100GP29377 79 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 SPCS3P61009 180 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 HSPE1P61604 102 aaKnown RBP4.74□□□□□ -1.65
ATM-229ENST00000639953 MEF2CQ06413 473 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms