RNA–Protein interactions for RNA: ENST00000637686.1

CLN3-261, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-261ENST00000637686 TRGV3P03979 118 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 OR13C7P0DN81 318 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 RNASE2P10153 161 aaKnown RBP7.64□□□□□ -1.19
CLN3-261ENST00000637686 IAPPP10997 89 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 S100A11P31949 105 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 SNCAP37840 140 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 TPPP2P59282 170 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 EWSR1Q01844 656 aaKnown RBP eCLIP7.64□□□□□ -1.19
CLN3-261ENST00000637686 WT1-ASQ06250 92 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 LGALSLQ3ZCW2 172 aaPredicted RBP7.64□□□□□ -1.19
CLN3-261ENST00000637686 OXLD1Q5BKU9 147 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 LAMTOR1Q6IAA8 161 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 LINC00482Q8N8I6 264 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 CACNG8Q8WXS5 425 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 HINT2Q9BX68 163 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 SLA2Q9H6Q3 261 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 F11RQ9Y624 299 aaKnown RBP7.64□□□□□ -1.19
CLN3-261ENST00000637686 IGSF23A1L1A6 192 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 FAM24AA6NFZ4 105 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 I3L521 148 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 DFFBO76075 338 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 NXPH3O95157 252 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 IFNA10P01566 189 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 IGHV3-11P01762 117 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 PRH1P02810 166 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 OR8U8P0C7N1 319 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 IGLL1P15814 213 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 HIST1H1BP16401 226 aaKnown RBP7.63□□□□□ -1.19
CLN3-261ENST00000637686 CXCL2P19875 107 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 GPX4P36969 197 aaPredicted RBP7.63□□□□□ -1.19
CLN3-261ENST00000637686 AP2S1P53680 142 aaPredicted RBP7.63□□□□□ -1.19
CLN3-261ENST00000637686 EIF5AP63241 154 aaKnown RBP7.63□□□□□ -1.19
CLN3-261ENST00000637686 DEFA5Q01523 94 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 EXOSC2Q13868 293 aaKnown RBP7.63□□□□□ -1.19
CLN3-261ENST00000637686 ZNF266Q14584 549 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 SPANXN5Q5MJ07 72 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 SAMD5Q5TGI4 173 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 OR11H1Q8NG94 326 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 OR10P1Q8NGE3 313 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 OR10W1Q8NGF6 305 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 OR1S2Q8NGQ3 325 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 OR1N2Q8NGR9 330 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 OR4C12Q96R67 309 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 ATP6V0BQ99437 205 aa7.63□□□□□ -1.19
CLN3-261ENST00000637686 PARD6GQ9BYG4 376 aaPredicted RBP7.63□□□□□ -1.19
CLN3-261ENST00000637686 KANTRA0A1W2PQU2 76 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 PRSS46E5RG02 174 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 BCL2L11O43521 198 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 JTBO76095 146 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 LGALS1P09382 135 aaKnown RBP7.62□□□□□ -1.19
CLN3-261ENST00000637686 DLK1P80370 383 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 RUNX1Q01196 453 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 DEFA6Q01524 100 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 VWC2Q2TAL6 325 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 ETFRF1Q6IPR1 90 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 TMUB2Q71RG4 321 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 TMEM170AQ8WVE7 144 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 DPF1Q92782 380 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 ARPC5LQ9BPX5 153 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 ARL6Q9H0F7 186 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 ZC4H2Q9NQZ6 224 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 THYN1Q9P016 225 aa7.62□□□□□ -1.19
CLN3-261ENST00000637686 IGHV4OR15-8A0A075B7B6 117 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 A0A087WW49 117 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 A0A0G2JLM5 398 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 RPS10-NUDT3A0A1W2PQS6 291 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 H3BP45 60 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 IFNA4P05014 189 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 REG1AP05451 166 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 METTL15P1P0C7V9 234 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 AREGP15514 252 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 CD69Q07108 199 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 ZNF616Q08AN1 781 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 FHL3Q13643 280 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 BEAN1Q3B7T3 259 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 SPINK9Q5DT21 86 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 C19orf35Q6ZS72 473 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 SLC51BQ86UW2 128 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 UBAC2Q8NBM4 344 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 OR5C1Q8NGR4 320 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 STOML3Q8TAV4 291 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 RCC1LQ96I51 464 aaKnown RBP7.61□□□□□ -1.19
CLN3-261ENST00000637686 ATP5SQ99766 215 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 TMEM147Q9BVK8 224 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 FBXL17Q9UF56 701 aa7.61□□□□□ -1.19
CLN3-261ENST00000637686 IGLV11-55A0A075B6I3 123 aa7.6□□□□□ -1.19
CLN3-261ENST00000637686 BORCS7-ASMTA0A0B4J1R7 106 aa7.6□□□□□ -1.19
CLN3-261ENST00000637686 ANKRD34BA5PLL1 514 aa7.6□□□□□ -1.19
CLN3-261ENST00000637686 LINC01619G3V211 115 aa7.6□□□□□ -1.19
CLN3-261ENST00000637686 MPDU1O75352 247 aa7.6□□□□□ -1.19
CLN3-261ENST00000637686 OR2J3O76001 311 aa7.6□□□□□ -1.19
CLN3-261ENST00000637686 CST7O76096 145 aa7.6□□□□□ -1.19
CLN3-261ENST00000637686 HSPB1P04792 205 aaKnown RBP7.6□□□□□ -1.19
CLN3-261ENST00000637686 FCGR2BP31994 310 aaPredicted RBP7.6□□□□□ -1.19
CLN3-261ENST00000637686 RHOGP84095 191 aa7.6□□□□□ -1.19
CLN3-261ENST00000637686 NHLH2Q02577 135 aa7.6□□□□□ -1.19
CLN3-261ENST00000637686 SLC38A11Q08AI6 406 aa7.6□□□□□ -1.19
CLN3-261ENST00000637686 OPCMLQ14982 345 aa7.6□□□□□ -1.19
CLN3-261ENST00000637686 FAM209BQ5JX69 171 aa7.6□□□□□ -1.19
CLN3-261ENST00000637686 HAPLN4Q86UW8 402 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms