RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 U3KQ87 197 aa13.2□□□□□ -0.3
CLN6-218ENST00000637223 OR2T8A6NH00 312 aa13.19□□□□□ -0.3
CLN6-218ENST00000637223 F8W735 103 aaPredicted RBP13.19□□□□□ -0.3
CLN6-218ENST00000637223 SSSCA1O60232 199 aa13.19□□□□□ -0.3
CLN6-218ENST00000637223 SIX6O95475 246 aa13.19□□□□□ -0.3
CLN6-218ENST00000637223 OPRK1P41145 380 aa13.19□□□□□ -0.3
CLN6-218ENST00000637223 MLANAQ16655 118 aa13.19□□□□□ -0.3
CLN6-218ENST00000637223 C2orf50Q96LR7 162 aa13.19□□□□□ -0.3
CLN6-218ENST00000637223 CIB3Q96Q77 187 aaPredicted RBP13.19□□□□□ -0.3
CLN6-218ENST00000637223 FNDC4Q9H6D8 234 aaPredicted RBP13.19□□□□□ -0.3
CLN6-218ENST00000637223 PAIP2BQ9ULR5 123 aaKnown RBP13.19□□□□□ -0.3
CLN6-218ENST00000637223 H3BP45 60 aa13.18□□□□□ -0.3
CLN6-218ENST00000637223 OVOL1O14753 267 aa13.18□□□□□ -0.3
CLN6-218ENST00000637223 GGCTO75223 188 aaKnown RBP13.18□□□□□ -0.3
CLN6-218ENST00000637223 OR2C1O95371 312 aa13.18□□□□□ -0.3
CLN6-218ENST00000637223 MBPP02686 304 aaPredicted RBP13.18□□□□□ -0.3
CLN6-218ENST00000637223 MFAP4P55083 255 aa13.18□□□□□ -0.3
CLN6-218ENST00000637223 SYNJ2BPP57105 145 aa13.18□□□□□ -0.3
CLN6-218ENST00000637223 FGL1Q08830 312 aa13.18□□□□□ -0.3
CLN6-218ENST00000637223 ZFP69Q49AA0 526 aa13.18□□□□□ -0.3
CLN6-218ENST00000637223 OXLD1Q5BKU9 147 aa13.18□□□□□ -0.3
CLN6-218ENST00000637223 ACSM6Q6P461 480 aa13.18□□□□□ -0.3
CLN6-218ENST00000637223 NOXA1Q86UR1 476 aa13.18□□□□□ -0.3
CLN6-218ENST00000637223 RCC1LQ96I51 464 aaKnown RBP13.18□□□□□ -0.3
CLN6-218ENST00000637223 HYLS1Q96M11 299 aa13.18□□□□□ -0.3
CLN6-218ENST00000637223 WNK1Q9H4A3 2382 aa13.17□□□□□ -0.3
CLN6-218ENST00000637223 C15orf62A8K5M9 175 aa13.17□□□□□ -0.3
CLN6-218ENST00000637223 G3V4G9 280 aa13.17□□□□□ -0.3
CLN6-218ENST00000637223 TGOLN2O43493 480 aa13.17□□□□□ -0.3
CLN6-218ENST00000637223 IFNA4P05014 189 aa13.17□□□□□ -0.3
CLN6-218ENST00000637223 H2BFSP57053 126 aa13.17□□□□□ -0.3
CLN6-218ENST00000637223 KLF5Q13887 457 aaPredicted RBP13.17□□□□□ -0.3
CLN6-218ENST00000637223 SPANXN5Q5MJ07 72 aa13.17□□□□□ -0.3
CLN6-218ENST00000637223 RNASEH2CQ8TDP1 164 aaKnown RBP13.17□□□□□ -0.3
CLN6-218ENST00000637223 OR4C12Q96R67 309 aa13.17□□□□□ -0.3
CLN6-218ENST00000637223 NMES1Q9C002 83 aa13.17□□□□□ -0.3
CLN6-218ENST00000637223 MRPL36Q9P0J6 103 aaKnown RBP13.17□□□□□ -0.3
CLN6-218ENST00000637223 RCL1Q9Y2P8 373 aaKnown RBP13.17□□□□□ -0.3
CLN6-218ENST00000637223 LSM5Q9Y4Y9 91 aaKnown RBP13.17□□□□□ -0.3
CLN6-218ENST00000637223 IGHV3-35A0A0C4DH35 117 aa13.16□□□□□ -0.3
CLN6-218ENST00000637223 RPS10-NUDT3A0A1W2PQS6 291 aa13.16□□□□□ -0.3
CLN6-218ENST00000637223 SEC14L6B5MCN3 397 aa13.16□□□□□ -0.3
CLN6-218ENST00000637223 C1QL4Q86Z23 238 aa13.16□□□□□ -0.3
CLN6-218ENST00000637223 BSCL2Q96G97 398 aaPredicted RBP13.16□□□□□ -0.3
CLN6-218ENST00000637223 CHRDL1Q9BU40 450 aa13.16□□□□□ -0.3
CLN6-218ENST00000637223 PSENENQ9NZ42 101 aa13.16□□□□□ -0.3
CLN6-218ENST00000637223 GNG7O60262 68 aa13.15□□□□□ -0.3
CLN6-218ENST00000637223 TMEM50AO95807 157 aa13.15□□□□□ -0.3
CLN6-218ENST00000637223 ATP5IP56385 69 aaPredicted RBP13.15□□□□□ -0.3
CLN6-218ENST00000637223 S100A10P60903 97 aa13.15□□□□□ -0.3
CLN6-218ENST00000637223 RAB11AP62491 216 aa13.15□□□□□ -0.3
CLN6-218ENST00000637223 RPP30P78346 268 aaKnown RBP13.15□□□□□ -0.3
CLN6-218ENST00000637223 CD300CQ08708 224 aa13.15□□□□□ -0.3
CLN6-218ENST00000637223 OR2T35Q8NGX2 323 aa13.15□□□□□ -0.3
CLN6-218ENST00000637223 ATP6V0BQ99437 205 aa13.15□□□□□ -0.3
CLN6-218ENST00000637223 TXN2Q99757 166 aa13.15□□□□□ -0.3
CLN6-218ENST00000637223 MCRIP2Q9BUT9 160 aaKnown RBP13.15□□□□□ -0.3
CLN6-218ENST00000637223 NBEAL2Q6ZNJ1 2754 aa13.15□□□□□ -0.3
CLN6-218ENST00000637223 K7EPK0 472 aa13.14□□□□□ -0.31
CLN6-218ENST00000637223 LY86O95711 162 aa13.14□□□□□ -0.31
CLN6-218ENST00000637223 FCGR2BP31994 310 aaPredicted RBP13.14□□□□□ -0.31
CLN6-218ENST00000637223 ADMP35318 185 aa13.14□□□□□ -0.31
CLN6-218ENST00000637223 NPBWR1P48145 328 aa13.14□□□□□ -0.31
CLN6-218ENST00000637223 PAX9P55771 341 aa13.14□□□□□ -0.31
CLN6-218ENST00000637223 IL15RAQ13261 267 aa13.14□□□□□ -0.31
CLN6-218ENST00000637223 SAMD5Q5TGI4 173 aa13.14□□□□□ -0.31
CLN6-218ENST00000637223 SPSB3Q6PJ21 355 aa13.14□□□□□ -0.31
CLN6-218ENST00000637223 SMIM8Q96KF7 97 aa13.14□□□□□ -0.31
CLN6-218ENST00000637223 RAB40CQ96S21 281 aa13.14□□□□□ -0.31
CLN6-218ENST00000637223 GAR1Q9NY12 217 aaKnown RBP13.14□□□□□ -0.31
CLN6-218ENST00000637223 STRAPQ9Y3F4 350 aaKnown RBP13.14□□□□□ -0.31
CLN6-218ENST00000637223 ZNF320A2RRD8 509 aa13.13□□□□□ -0.31
CLN6-218ENST00000637223 BOLA2-SMG1P6H3BVE0 249 aa13.13□□□□□ -0.31
CLN6-218ENST00000637223 L7N2F9 121 aa13.13□□□□□ -0.31
CLN6-218ENST00000637223 NUPL2O15504 423 aaKnown RBP13.13□□□□□ -0.31
CLN6-218ENST00000637223 SAP30O75446 220 aa13.13□□□□□ -0.31
CLN6-218ENST00000637223 CTSGP08311 255 aa13.13□□□□□ -0.31
CLN6-218ENST00000637223 EIF2B2P49770 351 aaKnown RBP13.13□□□□□ -0.31
CLN6-218ENST00000637223 RND2P52198 227 aa13.13□□□□□ -0.31
CLN6-218ENST00000637223 VAMP2P63027 116 aa13.13□□□□□ -0.31
CLN6-218ENST00000637223 CD69Q07108 199 aa13.13□□□□□ -0.31
CLN6-218ENST00000637223 RAB32Q13637 225 aa13.13□□□□□ -0.31
CLN6-218ENST00000637223 PRSS54Q6PEW0 395 aa13.13□□□□□ -0.31
CLN6-218ENST00000637223 SLC16A13Q7RTY0 426 aa13.13□□□□□ -0.31
CLN6-218ENST00000637223 GPHB5Q86YW7 130 aa13.13□□□□□ -0.31
CLN6-218ENST00000637223 OR9G4Q8NGQ1 327 aa13.13□□□□□ -0.31
CLN6-218ENST00000637223 OR4X1Q8NH49 305 aa13.13□□□□□ -0.31
CLN6-218ENST00000637223 WDR89Q96FK6 387 aaPredicted RBP13.13□□□□□ -0.31
CLN6-218ENST00000637223 CLN5O75503 358 aa13.12□□□□□ -0.31
CLN6-218ENST00000637223 SLC25A4P12235 298 aa13.12□□□□□ -0.31
CLN6-218ENST00000637223 FAM106AQ4KMX7 169 aa13.12□□□□□ -0.31
CLN6-218ENST00000637223 C9orf66Q5T8R8 295 aa13.12□□□□□ -0.31
CLN6-218ENST00000637223 ETFRF1Q6IPR1 90 aa13.12□□□□□ -0.31
CLN6-218ENST00000637223 UNQ9165/PRO28630Q6UXU0 137 aa13.12□□□□□ -0.31
CLN6-218ENST00000637223 ACY3Q96HD9 319 aa13.12□□□□□ -0.31
CLN6-218ENST00000637223 ELOVL1Q9BW60 279 aa13.12□□□□□ -0.31
CLN6-218ENST00000637223 HMSDA8MTL9 139 aa13.11□□□□□ -0.31
CLN6-218ENST00000637223 PET100P0DJ07 73 aa13.11□□□□□ -0.31
CLN6-218ENST00000637223 TAS2R30P59541 319 aa13.11□□□□□ -0.31
CLN6-218ENST00000637223 LRRC37A5PQ49AS3 106 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms