RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 CADP27708 2225 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 ASPMQ8IZT6 3477 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 A0A1W2PN81 502 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 A0A1W2PS18 150 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 H0YJW9 148 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 ZNF253O75346 499 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 ZNF324O75467 553 aaPredicted RBP11.79□□□□□ -0.52
CLN6-215ENST00000636674 IRF2P14316 349 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 USF1P22415 310 aaPredicted RBP11.79□□□□□ -0.52
CLN6-215ENST00000636674 RPL8P62917 257 aaKnown RBP11.79□□□□□ -0.52
CLN6-215ENST00000636674 ERHP84090 104 aaKnown RBP11.79□□□□□ -0.52
CLN6-215ENST00000636674 GAGE1Q13065 139 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 FAM71F2Q6NXP2 309 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 HARBI1Q96MB7 349 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 MRPL20Q9BYC9 149 aaKnown RBP11.79□□□□□ -0.52
CLN6-215ENST00000636674 DNAJC4Q9NNZ3 241 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 DYSFO75923 2080 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 DIRC3C9JPN6 131 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 SRIP30626 198 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 AMTP48728 403 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 OR10W1Q8NGF6 305 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 OR1L4Q8NGR5 311 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 TMEM167AQ8TBQ9 72 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 RCHY1Q96PM5 261 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 DCAF16Q9NXF7 216 aa11.79□□□□□ -0.52
CLN6-215ENST00000636674 NKX6-3A6NJ46 265 aa11.78□□□□□ -0.52
CLN6-215ENST00000636674 MGST1P10620 155 aaKnown RBP11.78□□□□□ -0.52
CLN6-215ENST00000636674 TCL1AP56279 114 aa11.78□□□□□ -0.52
CLN6-215ENST00000636674 MLANAQ16655 118 aa11.78□□□□□ -0.52
CLN6-215ENST00000636674 MORN5Q5VZ52 161 aa11.78□□□□□ -0.52
CLN6-215ENST00000636674 THAP8Q8NA92 274 aa11.78□□□□□ -0.52
CLN6-215ENST00000636674 DEFB108BQ8NET1 73 aa11.78□□□□□ -0.52
CLN6-215ENST00000636674 NUP37Q8NFH4 326 aa11.78□□□□□ -0.52
CLN6-215ENST00000636674 PRRC2CQ9Y520 2896 aaKnown RBP11.78□□□□□ -0.52
CLN6-215ENST00000636674 SPINK4O60575 86 aa11.77□□□□□ -0.52
CLN6-215ENST00000636674 CRYABP02511 175 aaKnown RBP11.77□□□□□ -0.52
CLN6-215ENST00000636674 BTF3P20290 206 aaKnown RBP11.77□□□□□ -0.52
CLN6-215ENST00000636674 KRTDAPP60985 99 aa11.77□□□□□ -0.52
CLN6-215ENST00000636674 C1orf185Q5T7R7 199 aa11.77□□□□□ -0.52
CLN6-215ENST00000636674 ALKBH2Q6NS38 261 aa11.77□□□□□ -0.52
CLN6-215ENST00000636674 MRPL54Q6P161 138 aaKnown RBP11.77□□□□□ -0.52
CLN6-215ENST00000636674 IGF2-ASQ6U949 168 aa11.77□□□□□ -0.52
CLN6-215ENST00000636674 C19orf35Q6ZS72 473 aa11.77□□□□□ -0.52
CLN6-215ENST00000636674 VSTM2AQ8TAG5 236 aa11.77□□□□□ -0.52
CLN6-215ENST00000636674 ZNF430Q9H8G1 570 aaPredicted RBP11.77□□□□□ -0.52
CLN6-215ENST00000636674 ZNRD1Q9P1U0 126 aa11.77□□□□□ -0.52
CLN6-215ENST00000636674 ANKRD11Q6UB99 2663 aaPredicted RBP11.77□□□□□ -0.52
CLN6-215ENST00000636674 APCSP02743 223 aa11.77□□□□□ -0.53
CLN6-215ENST00000636674 BPIFB3P59826 476 aa11.77□□□□□ -0.53
CLN6-215ENST00000636674 IGFL3Q6UXB1 125 aa11.77□□□□□ -0.53
CLN6-215ENST00000636674 ZNF329Q86UD4 541 aa11.77□□□□□ -0.53
CLN6-215ENST00000636674 NIT1Q86X76 327 aa11.77□□□□□ -0.53
CLN6-215ENST00000636674 PDPNQ86YL7 162 aa11.77□□□□□ -0.53
CLN6-215ENST00000636674 ZADH2Q8N4Q0 377 aa11.77□□□□□ -0.53
CLN6-215ENST00000636674 C8orf31Q8N9H6 132 aa11.77□□□□□ -0.53
CLN6-215ENST00000636674 ZNF596Q8TC21 504 aa11.77□□□□□ -0.53
CLN6-215ENST00000636674 RND1Q92730 232 aa11.77□□□□□ -0.53
CLN6-215ENST00000636674 CHRDL1Q9BU40 450 aa11.77□□□□□ -0.53
CLN6-215ENST00000636674 ZNF331Q9NQX6 463 aaPredicted RBP11.77□□□□□ -0.53
CLN6-215ENST00000636674 AMMECR1Q9Y4X0 333 aaPredicted RBP11.77□□□□□ -0.53
CLN6-215ENST00000636674 YLPM1P49750 1951 aaKnown RBP11.77□□□□□ -0.53
CLN6-215ENST00000636674 TCRBV4S1A1TA0A5B7 111 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 PEX7O00628 323 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 DLEU1O43261 78 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 COX7A2P2O60397 106 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 FSTL3O95633 263 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 ZNF25P17030 456 aaPredicted RBP11.76□□□□□ -0.53
CLN6-215ENST00000636674 G0S2P27469 103 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 CHRNB4P30926 498 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 PRRX1P54821 245 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 SLC35B1P78383 322 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 DEFB109BQ30KR1 87 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 KIAA1644Q3SXP7 199 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 OR2T6Q8NHC8 308 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 SNRNP40Q96DI7 357 aaKnown RBP11.76□□□□□ -0.53
CLN6-215ENST00000636674 SMIM12Q96EX1 92 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 GRAMD2BQ96HH9 432 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 TMEM68Q96MH6 324 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 FAM103A1Q9BTL3 118 aaKnown RBP11.76□□□□□ -0.53
CLN6-215ENST00000636674 PAXXQ9BUH6 204 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 ZNF355PQ9NSJ1 428 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 TRAV5A0A0B4J249 113 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 CGB1A6NKQ9 187 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 CD40P25942 277 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 MYCNOSP40205 109 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 C10orf113Q5VZT2 155 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 LINC00311Q8N616 119 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 OR4C13Q8NGP0 309 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 C18orf32Q8TCD1 76 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 TSKUQ8WUA8 353 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 FLYWCH2Q96CP2 140 aaKnown RBP11.76□□□□□ -0.53
CLN6-215ENST00000636674 TMEM208Q9BTX3 173 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 FNDC4Q9H6D8 234 aaPredicted RBP11.76□□□□□ -0.53
CLN6-215ENST00000636674 SERTAD4Q9NUC0 356 aa11.76□□□□□ -0.53
CLN6-215ENST00000636674 CACNA1BQ00975 2339 aa11.75□□□□□ -0.53
CLN6-215ENST00000636674 DSPP15924 2871 aaKnown RBP11.75□□□□□ -0.53
CLN6-215ENST00000636674 NBEAQ8NFP9 2946 aa11.75□□□□□ -0.53
CLN6-215ENST00000636674 IGKV1D-37A0A075B6S9 117 aa11.75□□□□□ -0.53
CLN6-215ENST00000636674 TNFRSF1AP19438 455 aa11.75□□□□□ -0.53
CLN6-215ENST00000636674 PMCHP20382 165 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms