RNA–Protein interactions for RNA: ENST00000636661.1

CLCN2-215, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 4,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-215ENST00000636661 TIMP3P35625 211 aa13.55□□□□□ -0.24
CLCN2-215ENST00000636661 Q1RN00 199 aa13.55□□□□□ -0.24
CLCN2-215ENST00000636661 TEX38Q6PEX7 206 aa13.55□□□□□ -0.24
CLCN2-215ENST00000636661 ASCL4Q6XD76 172 aa13.55□□□□□ -0.24
CLCN2-215ENST00000636661 KIAA1671Q9BY89 1806 aa13.55□□□□□ -0.24
CLCN2-215ENST00000636661 OR4C46A6NHA9 309 aa13.54□□□□□ -0.24
CLCN2-215ENST00000636661 C19orf35Q6ZS72 473 aa13.54□□□□□ -0.24
CLCN2-215ENST00000636661 SCGB1C2P0DMR2 95 aa13.54□□□□□ -0.24
CLCN2-215ENST00000636661 PMCHL1Q16048 86 aa13.54□□□□□ -0.24
CLCN2-215ENST00000636661 SCGB1D4Q6XE38 83 aa13.54□□□□□ -0.24
CLCN2-215ENST00000636661 TCF24Q7RTU0 167 aa13.54□□□□□ -0.24
CLCN2-215ENST00000636661 ZNF738Q8NE65 137 aa13.54□□□□□ -0.24
CLCN2-215ENST00000636661 FOXA2Q9Y261 457 aaPredicted RBP13.54□□□□□ -0.24
CLCN2-215ENST00000636661 IGHV3-66A0A0C4DH42 116 aa13.54□□□□□ -0.24
CLCN2-215ENST00000636661 HIGD1CA8MV81 97 aa13.54□□□□□ -0.24
CLCN2-215ENST00000636661 TBR1Q16650 682 aa13.54□□□□□ -0.24
CLCN2-215ENST00000636661 TMEM256Q8N2U0 113 aa13.54□□□□□ -0.24
CLCN2-215ENST00000636661 PMCHL2Q9BQD1 86 aa13.54□□□□□ -0.24
CLCN2-215ENST00000636661 RPL7P18124 248 aaKnown RBP13.53□□□□□ -0.24
CLCN2-215ENST00000636661 MFAP4P55083 255 aa13.53□□□□□ -0.24
CLCN2-215ENST00000636661 ERASQ7Z444 233 aa13.53□□□□□ -0.24
CLCN2-215ENST00000636661 COMPP49747 757 aaPredicted RBP13.53□□□□□ -0.24
CLCN2-215ENST00000636661 MLANAQ16655 118 aa13.53□□□□□ -0.24
CLCN2-215ENST00000636661 TMEM97Q5BJF2 176 aa13.53□□□□□ -0.24
CLCN2-215ENST00000636661 LINC01551Q86U37 167 aa13.53□□□□□ -0.24
CLCN2-215ENST00000636661 RAB37Q96AX2 223 aa13.53□□□□□ -0.24
CLCN2-215ENST00000636661 TRAV1-1A0A0B4J248 108 aa13.53□□□□□ -0.24
CLCN2-215ENST00000636661 ZNF207O43670 478 aaKnown RBP13.53□□□□□ -0.24
CLCN2-215ENST00000636661 CEACAM1P13688 526 aa13.53□□□□□ -0.24
CLCN2-215ENST00000636661 FAM90A2PQ658T7 463 aa13.53□□□□□ -0.24
CLCN2-215ENST00000636661 J3QR89 54 aa13.53□□□□□ -0.24
CLCN2-215ENST00000636661 HBBP68871 147 aa13.53□□□□□ -0.24
CLCN2-215ENST00000636661 SLC25A33Q9BSK2 321 aa13.53□□□□□ -0.24
CLCN2-215ENST00000636661 LINC00312Q9Y6C7 94 aa13.53□□□□□ -0.24
CLCN2-215ENST00000636661 DYSFO75923 2080 aa13.52□□□□□ -0.24
CLCN2-215ENST00000636661 KLK15Q9H2R5 256 aa13.52□□□□□ -0.24
CLCN2-215ENST00000636661 FOXH1O75593 365 aa13.52□□□□□ -0.25
CLCN2-215ENST00000636661 LIPFP07098 398 aa13.52□□□□□ -0.25
CLCN2-215ENST00000636661 JOSD1Q15040 202 aaPredicted RBP13.52□□□□□ -0.25
CLCN2-215ENST00000636661 NRN1Q9NPD7 142 aa13.52□□□□□ -0.25
CLCN2-215ENST00000636661 KIF26AQ9ULI4 1882 aaPredicted RBP13.52□□□□□ -0.25
CLCN2-215ENST00000636661 IGHV1-46P01743 117 aa13.52□□□□□ -0.25
CLCN2-215ENST00000636661 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.52□□□□□ -0.25
CLCN2-215ENST00000636661 COL4A3Q01955 1670 aa13.52□□□□□ -0.25
CLCN2-215ENST00000636661 TMEM78Q5T7P6 136 aa13.51□□□□□ -0.25
CLCN2-215ENST00000636661 COLCA1Q6ZS62 124 aa13.51□□□□□ -0.25
CLCN2-215ENST00000636661 ZNRD1Q9P1U0 126 aa13.51□□□□□ -0.25
CLCN2-215ENST00000636661 TM4SF5O14894 197 aa13.51□□□□□ -0.25
CLCN2-215ENST00000636661 PF4V1P10720 104 aa13.51□□□□□ -0.25
CLCN2-215ENST00000636661 LOXL3P58215 753 aa13.51□□□□□ -0.25
CLCN2-215ENST00000636661 C2orf83Q53S99 150 aa13.51□□□□□ -0.25
CLCN2-215ENST00000636661 LINC00469Q8N7U9 141 aa13.51□□□□□ -0.25
CLCN2-215ENST00000636661 AGMATQ9BSE5 352 aa13.51□□□□□ -0.25
CLCN2-215ENST00000636661 OR5R1Q8NH85 324 aa13.51□□□□□ -0.25
CLCN2-215ENST00000636661 AP5S1Q9NUS5 200 aa13.51□□□□□ -0.25
CLCN2-215ENST00000636661 TRBV9A0A0B4J1U6 114 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 PAX9P55771 341 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 RELQ04864 619 aaPredicted RBP13.5□□□□□ -0.25
CLCN2-215ENST00000636661 SRSF7Q16629 238 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLCN2-215ENST00000636661 LBHQ53QV2 105 aaPredicted RBP13.5□□□□□ -0.25
CLCN2-215ENST00000636661 SLC25A34Q6PIV7 304 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 C18orf15Q96N68 181 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 ANAPC10Q9UM13 185 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 LOC105371242A0A075B767 164 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 STAG3L2P0CL84 134 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 STAG3L3P0CL85 134 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 CD69Q07108 199 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 F11RQ9Y624 299 aaKnown RBP13.5□□□□□ -0.25
CLCN2-215ENST00000636661 FOXI3A8MTJ6 420 aaPredicted RBP13.5□□□□□ -0.25
CLCN2-215ENST00000636661 IGKV1D-33P01593 117 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 IGKV1-33P01594 117 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 APOBEC3AP31941 199 aaPredicted RBP13.5□□□□□ -0.25
CLCN2-215ENST00000636661 MDS2Q8NDY4 140 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 CACNG8Q8WXS5 425 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 C16orf92Q96LL3 132 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 MGST2Q99735 147 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 NDUFAF3Q9BU61 184 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 TMEM208Q9BTX3 173 aa13.5□□□□□ -0.25
CLCN2-215ENST00000636661 TANC1Q9C0D5 1861 aa13.49□□□□□ -0.25
CLCN2-215ENST00000636661 C15orf62A8K5M9 175 aa13.49□□□□□ -0.25
CLCN2-215ENST00000636661 NDUFS6O75380 124 aaKnown RBP13.49□□□□□ -0.25
CLCN2-215ENST00000636661 FAM106CPP0CH98 169 aa13.49□□□□□ -0.25
CLCN2-215ENST00000636661 FAM57AQ8TBR7 257 aa13.49□□□□□ -0.25
CLCN2-215ENST00000636661 LY6EQ16553 131 aa13.49□□□□□ -0.25
CLCN2-215ENST00000636661 SONP18583 2426 aaKnown RBP13.49□□□□□ -0.25
CLCN2-215ENST00000636661 B9A039 149 aa13.49□□□□□ -0.25
CLCN2-215ENST00000636661 ATP5IP56385 69 aaPredicted RBP13.49□□□□□ -0.25
CLCN2-215ENST00000636661 MYOZ3Q8TDC0 251 aa13.49□□□□□ -0.25
CLCN2-215ENST00000636661 RPUSD1Q9UJJ7 312 aaKnown RBP13.49□□□□□ -0.25
CLCN2-215ENST00000636661 ZFP30Q9Y2G7 519 aa13.49□□□□□ -0.25
CLCN2-215ENST00000636661 IGKV1D-17A0A075B6S4 117 aa13.48□□□□□ -0.25
CLCN2-215ENST00000636661 A0A1B0GUS0 222 aa13.48□□□□□ -0.25
CLCN2-215ENST00000636661 NPIPB11E5RHQ5 1161 aa13.48□□□□□ -0.25
CLCN2-215ENST00000636661 PRCDQ00LT1 54 aa13.48□□□□□ -0.25
CLCN2-215ENST00000636661 SRSF9Q13242 221 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLCN2-215ENST00000636661 TMEM136Q6ZRR5 245 aa13.48□□□□□ -0.25
CLCN2-215ENST00000636661 IGKV1-39P01597 117 aa13.48□□□□□ -0.25
CLCN2-215ENST00000636661 HLA-DRB1P01911 266 aa13.48□□□□□ -0.25
CLCN2-215ENST00000636661 IGKV1D-39P04432 117 aa13.48□□□□□ -0.25
CLCN2-215ENST00000636661 TMEM70Q9BUB7 260 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms