RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 FBXL7Q9UJT9 491 aa11.4□□□□□ -0.58
CACNA1A-228ENST00000636610 SLC25A17O43808 307 aa11.39□□□□□ -0.59
CACNA1A-228ENST00000636610 RNASE2P10153 161 aaKnown RBP11.39□□□□□ -0.59
CACNA1A-228ENST00000636610 SSTP61278 116 aa11.39□□□□□ -0.59
CACNA1A-228ENST00000636610 CUL9Q8IWT3 2517 aa11.39□□□□□ -0.59
CACNA1A-228ENST00000636610 TBL2Q9Y4P3 447 aaKnown RBP11.39□□□□□ -0.59
CACNA1A-228ENST00000636610 FAM90A9PA6NNJ1 464 aa11.39□□□□□ -0.59
CACNA1A-228ENST00000636610 FCN3O75636 299 aa11.39□□□□□ -0.59
CACNA1A-228ENST00000636610 ZNF25P17030 456 aaPredicted RBP11.39□□□□□ -0.59
CACNA1A-228ENST00000636610 C1orf194Q5T5A4 169 aa11.39□□□□□ -0.59
CACNA1A-228ENST00000636610 FNDC4Q9H6D8 234 aaPredicted RBP11.39□□□□□ -0.59
CACNA1A-228ENST00000636610 A0A1W2PN81 502 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 MBD3L4A6NDZ8 208 aaPredicted RBP11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 MBD3L3A6NE82 208 aaPredicted RBP11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 MBD3L5A6NJ08 208 aaPredicted RBP11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 MBD3L2Q8NHZ7 208 aaPredicted RBP11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 SAP30LQ9HAJ7 183 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 TIMM8BQ9Y5J9 83 aaPredicted RBP11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 CORTO00230 105 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 AREGP15514 252 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 PAX1P15863 534 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 NUTF2P61970 127 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 WT1-ASQ06250 92 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 DNLZQ5SXM8 178 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 ZNF788Q6ZQV5 615 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 LYNX1G3V0Z9 82 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 M0R143 59 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 COX7A2P2O60397 106 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 LYNX1P0DP58 116 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 RPL8P62917 257 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 MAJINQ3KP22 176 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 TPTE2P1Q5T6R2 138 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 LCN12Q6JVE5 192 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 SLC25A48Q6ZT89 311 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 SLC25A33Q9BSK2 321 aa11.38□□□□□ -0.59
CACNA1A-228ENST00000636610 KLK10O43240 276 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 TNFSF4P23510 183 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 CR1LQ2VPA4 569 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 KIR3DL3Q8N743 410 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 FLYWCH2Q96CP2 140 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 VAMP8Q9BV40 100 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 ANKHD1Q8IWZ3 2542 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 hADV38S2A0JD32 116 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 C8orf88P0DMB2 117 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 CFHR2P36980 270 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 MFAP2P55001 183 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 CD69Q07108 199 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 TMEM249Q2WGJ8 235 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 TMEM200BQ69YZ2 307 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 IGFL2Q6UWQ7 119 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 SLC35E1Q96K37 410 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 TMEM167BQ9NRX6 74 aa11.37□□□□□ -0.59
CACNA1A-228ENST00000636610 IGLV3-9A0A075B6K5 115 aa11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 ISLRO14498 428 aa11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 APOA2P02652 100 aa11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 SLAQ13239 276 aa11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 OR1B1Q8NGR6 318 aa11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 RALYQ9UKM9 306 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 DIRC3C9JPN6 131 aa11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 M0QZ24 198 aa11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 CNTFRP26992 372 aa11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 BSPH1Q075Z2 132 aa11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 C1orf185Q5T7R7 199 aa11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 RBMXL3Q8N7X1 1067 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 TMEM68Q96MH6 324 aa11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 TXNDC17Q9BRA2 123 aa11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 SLC25A2Q9BXI2 301 aa11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 AMMECR1Q9Y4X0 333 aaPredicted RBP11.36□□□□□ -0.59
CACNA1A-228ENST00000636610 IGLV2-8P01709 118 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 USF1P22415 310 aaPredicted RBP11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 ERHP84090 104 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 CORO2AQ92828 525 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 C11orf52Q96A22 123 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 ZNF430Q9H8G1 570 aaPredicted RBP11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 DNAJC4Q9NNZ3 241 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 NRN1Q9NPD7 142 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 C9JCJ5 164 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 H0YJW9 148 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 PMCHL1Q16048 86 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 TMEM136Q6ZRR5 245 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 BEND2Q8NDZ0 799 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 ADTRPQ96IZ2 230 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 ZNF714Q96N38 554 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 TUBG2Q9NRH3 451 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 BMPR1BO00238 502 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 TM4SF5O14894 197 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 TAS2R45P59539 299 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 C10orf113Q5VZT2 155 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 PATE2Q6UY27 113 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 Q71RC1 249 aaPredicted RBP11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 PAXXQ9BUH6 204 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 CDC42EP3Q9UKI2 254 aa11.35□□□□□ -0.59
CACNA1A-228ENST00000636610 DPRXA6NFQ7 191 aa11.34□□□□□ -0.59
CACNA1A-228ENST00000636610 FOSL1P15407 271 aa11.34□□□□□ -0.59
CACNA1A-228ENST00000636610 CX3CL1P78423 397 aa11.34□□□□□ -0.59
CACNA1A-228ENST00000636610 A0A1W2PS18 150 aa11.34□□□□□ -0.59
CACNA1A-228ENST00000636610 FOXA3P55318 350 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-228ENST00000636610 SELENOTP62341 195 aa11.34□□□□□ -0.59
CACNA1A-228ENST00000636610 LINC00305Q7Z4B0 112 aa11.34□□□□□ -0.59
CACNA1A-228ENST00000636610 OR1L8Q8NGR8 309 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms