RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 ZNF436Q9C0F3 470 aaPredicted RBP6.53□□□□□ -1.36
CDKL5-209ENST00000635828 MPC2O95563 127 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 CTSGP08311 255 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 LGALS1P09382 135 aaKnown RBP6.53□□□□□ -1.36
CDKL5-209ENST00000635828 ZNF90Q03938 601 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 OR1N2Q8NGR9 330 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 DCUN1D4Q92564 292 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 SLA2Q9H6Q3 261 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 MBD2Q9UBB5 411 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 DEDDO75618 318 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 PRB2P02812 416 aaPredicted RBP6.52□□□□□ -1.37
CDKL5-209ENST00000635828 HTR2BP41595 481 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 GAMTQ14353 236 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 NPIPB3Q92617 1050 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 NBEAL2Q6ZNJ1 2754 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 IGLL1P15814 213 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 RND2P52198 227 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 C2orf83Q53S99 150 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 Q56UQ5 140 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 PVRIGQ6DKI7 326 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 ACOT7LQ6ZUV0 252 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 OR11H4Q8NGC9 324 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 TMEM68Q96MH6 324 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 C21orf62Q9NYP8 219 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 INS-IGF2F8WCM5 200 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 BCAP31P51572 246 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 ACSM6Q6P461 480 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 ADAMTSL5Q6ZMM2 481 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 NMES1Q9C002 83 aa6.52□□□□□ -1.37
CDKL5-209ENST00000635828 PEF1Q9UBV8 284 aaKnown RBP6.52□□□□□ -1.37
CDKL5-209ENST00000635828 IGKV1D-37A0A075B6S9 117 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 IGHV3-66A0A0C4DH42 116 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 G3V4G9 280 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 APOHP02749 345 aaPredicted RBP6.51□□□□□ -1.37
CDKL5-209ENST00000635828 FHL3Q13643 280 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 SMIM3Q9BZL3 60 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 U3KQ87 197 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.51□□□□□ -1.37
CDKL5-209ENST00000635828 ARL3P36405 182 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 ZNF616Q08AN1 781 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 TIGITQ495A1 244 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 TM4SF20Q53R12 229 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 TMEM14EPQ6UXP3 125 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 LINC00482Q8N8I6 264 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 ZFP57Q9NU63 452 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 FAM223BA6NKX1 122 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 FAM90A26D6RGX4 464 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 PF4P02776 101 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 PRB4P10163 310 aaPredicted RBP6.51□□□□□ -1.37
CDKL5-209ENST00000635828 FAM223AQ8IWN6 122 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 COMMD1Q8N668 190 aa6.51□□□□□ -1.37
CDKL5-209ENST00000635828 SRSF8Q9BRL6 282 aaKnown RBP6.51□□□□□ -1.37
CDKL5-209ENST00000635828 ZNF320A2RRD8 509 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 EIF3GO75821 320 aaKnown RBP eCLIP6.5□□□□□ -1.37
CDKL5-209ENST00000635828 IGKV1-17P01599 117 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 OR8U8P0C7N1 319 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 AP2S1P53680 142 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-209ENST00000635828 CD69Q07108 199 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 KLK9Q2XQG4 91 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 LILRB2Q8N423 598 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 TMEM252Q8N6L7 170 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 OR2T35Q8NGX2 323 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 THAP6Q8TBB0 222 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 SMIM8Q96KF7 97 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 KLK9Q9UKQ9 250 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 H3BUA1 57 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 IL34Q6ZMJ4 242 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 SLC16A13Q7RTY0 426 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 EEF1AKMT3Q96AZ1 226 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 USMG5Q96IX5 58 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 ST6GAL2Q96JF0 529 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 STRAPQ9Y3F4 350 aaKnown RBP6.5□□□□□ -1.37
CDKL5-209ENST00000635828 A0A0G2JLM5 398 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 SMCO3A2RU48 225 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 LINC01619G3V211 115 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 CLINT1Q14677 625 aa6.5□□□□□ -1.37
CDKL5-209ENST00000635828 LYRM2Q9NU23 88 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-209ENST00000635828 TGOLN2O43493 480 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 YIF1AO95070 293 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 HSPB1P04792 205 aaKnown RBP6.49□□□□□ -1.37
CDKL5-209ENST00000635828 OR2F1Q13607 317 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 HSD17B13Q7Z5P4 300 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-209ENST00000635828 WFDC1Q9HC57 220 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 IZUMO1RA6ND01 250 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 GNG7O60262 68 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 BRI3O95415 125 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 IGLC1P0CG04 106 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 SLC38A11Q08AI6 406 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 RPEL1Q2QD12 228 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 C20orf24Q9BUV8 137 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 TGP01266 2768 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 L7N2F9 121 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 MED6O75586 246 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 SNRPCP09234 159 aaKnown RBP6.49□□□□□ -1.37
CDKL5-209ENST00000635828 VAMP2P63027 116 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 EWSR1Q01844 656 aaKnown RBP eCLIP6.49□□□□□ -1.37
CDKL5-209ENST00000635828 KLF5Q13887 457 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-209ENST00000635828 STPG3Q8N7X2 389 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 RAB40CQ96S21 281 aa6.49□□□□□ -1.37
CDKL5-209ENST00000635828 THYN1Q9P016 225 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms