RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 RGS5O15539 181 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR2T1O43869 369 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR7C2O60412 319 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC16A7O60669 478 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 HSBP1O75506 76 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF189O75820 626 aaPredicted RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 RPP14O95059 124 aaKnown RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 FARS2O95363 451 aaKnown RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 SNAP29O95721 258 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 CA2P00918 260 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 SERPINA1P01009 418 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 PTHP01270 115 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 IGKV1D-12P01611 117 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 IGLV2-8P01709 118 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TTRP02766 147 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 SMR3BP02814 79 aaPredicted RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 IFNW1P05000 195 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 REG1AP05451 166 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 DBIP07108 87 aaKnown RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 BPGMP07738 259 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 ERCC1P07992 297 aaPredicted RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 FGF4P08620 206 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 RBP1P09455 135 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TFPTP0C1Z6 253 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 ASAH2BP0C7U1 165 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 PGA5P0DJD9 388 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 HTN3P15516 51 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 HIST1H1CP16403 213 aaKnown RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 PRKACAP17612 351 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 RAB5AP20339 215 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 GSTM3P21266 225 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 CRABP2P29373 138 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 CASQ1P31415 396 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 MPIP34949 423 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 PFN2P35080 140 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 ARR3P36575 388 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 CD200P41217 278 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 MAGEA2P43356 314 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 SERPINB9P50453 376 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 NUDT2P50583 147 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 GZMMP51124 257 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 POLR2JP52435 117 aaKnown RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 DLX6P56179 175 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 CLDN8P56748 225 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 FXYD7P58549 80 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TPPP2P59282 170 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 COPZ1P61923 177 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 GRB2P62993 217 aaKnown RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 PRR3P79522 188 aaKnown RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 FAM3AP98173 230 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 CDK6Q00534 326 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 MEF2CQ06413 473 aaPredicted RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 AESQ08117 197 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TPBGQ13641 420 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 INSL4Q14641 139 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 HLA-DRB5Q30154 266 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 PIGYQ3MUY2 71 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 LGALSLQ3ZCW2 172 aaPredicted RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC36A2Q495M3 483 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 C6orf99Q4VX62 202 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM155Q4W5P6 130 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 HSP90B2PQ58FF3 399 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 RPL39P5Q59GN2 51 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 SPINK9Q5DT21 86 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 GCSAMLQ5JQS6 135 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM69Q5SWH9 247 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 C10orf128Q5T292 105 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 LINC01590Q5TEZ4 76 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM236Q5W0B7 351 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF660Q6AZW8 331 aaPredicted RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 XAF1Q6GPH4 301 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR10K2Q6IF99 312 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 NIPAL1Q6NVV3 410 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TTC33Q6PID6 262 aaPredicted RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 DHRS4L2Q6PKH6 230 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 IDO2Q6ZQW0 420 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 SSX9Q7RTT3 188 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 DCXRQ7Z4W1 244 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 MTERF4Q7Z6M4 381 aaKnown RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC35E3Q7Z769 313 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 LYG2Q86SG7 212 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 ANGPTL5Q86XS5 388 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 NDUFA11Q86Y39 141 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OFCC1Q8IZS5 231 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 Q8N2B8 174 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 JAGN1Q8N5M9 183 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 DEFB125Q8N687 156 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF676Q8N7Q3 588 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC35G3Q8N808 338 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 C5orf56Q8N8D9 126 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 SPANXA2-OT1Q8N9U9 137 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 PROKR2Q8NFJ6 384 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR8G5Q8NG78 346 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR11H1Q8NG94 326 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR1M1Q8NGA1 313 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR4X2Q8NGF9 303 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR51A4Q8NGJ6 313 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR51A2Q8NGJ7 313 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR13C9Q8NGT0 318 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR11L1Q8NGX0 322 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms