RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 C15orf62A8K5M9 175 aa14.67□□□□□ -0.06
SQSTM1-216ENST00000626660 L7N2F9 121 aa14.67□□□□□ -0.06
SQSTM1-216ENST00000626660 TGOLN2O43493 480 aa14.67□□□□□ -0.06
SQSTM1-216ENST00000626660 SIX6O95475 246 aa14.67□□□□□ -0.06
SQSTM1-216ENST00000626660 IGHV3-48P01763 117 aa14.67□□□□□ -0.06
SQSTM1-216ENST00000626660 SLC25A4P12235 298 aa14.67□□□□□ -0.06
SQSTM1-216ENST00000626660 FCGR2BP31994 310 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-216ENST00000626660 VAMP2P63027 116 aa14.67□□□□□ -0.06
SQSTM1-216ENST00000626660 SPANXN5Q5MJ07 72 aa14.67□□□□□ -0.06
SQSTM1-216ENST00000626660 SMIM8Q96KF7 97 aa14.67□□□□□ -0.06
SQSTM1-216ENST00000626660 GPR61Q9BZJ8 451 aa14.67□□□□□ -0.06
SQSTM1-216ENST00000626660 ZC4H2Q9NQZ6 224 aa14.67□□□□□ -0.06
SQSTM1-216ENST00000626660 MGAT4CQ9UBM8 478 aa14.67□□□□□ -0.06
SQSTM1-216ENST00000626660 LSM5Q9Y4Y9 91 aaKnown RBP14.67□□□□□ -0.06
SQSTM1-216ENST00000626660 H3BP45 60 aa14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 NUPL2O15504 423 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 GNG7O60262 68 aa14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 SCGB2A1O75556 95 aa14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 OR2C1O95371 312 aa14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 PVALBP20472 110 aaPredicted RBP14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 SYNJ2BPP57105 145 aa14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 TAS2R30P59541 319 aa14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 S100A10P60903 97 aa14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 KLF5Q13887 457 aaPredicted RBP14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 FAM106AQ4KMX7 169 aa14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 C1QL4Q86Z23 238 aa14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 OR4C12Q96R67 309 aa14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 MED28Q9H204 178 aa14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 FNDC4Q9H6D8 234 aaPredicted RBP14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 RCL1Q9Y2P8 373 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-216ENST00000626660 IGLL1P15814 213 aa14.65□□□□□ -0.06
SQSTM1-216ENST00000626660 ELOVL1Q9BW60 279 aa14.65□□□□□ -0.06
SQSTM1-216ENST00000626660 NMES1Q9C002 83 aa14.65□□□□□ -0.06
SQSTM1-216ENST00000626660 SEC14L6B5MCN3 397 aa14.64□□□□□ -0.07
SQSTM1-216ENST00000626660 F8W735 103 aaPredicted RBP14.64□□□□□ -0.07
SQSTM1-216ENST00000626660 K7EPK0 472 aa14.64□□□□□ -0.07
SQSTM1-216ENST00000626660 TSC22D2O75157 780 aa14.64□□□□□ -0.07
SQSTM1-216ENST00000626660 CD69Q07108 199 aa14.64□□□□□ -0.07
SQSTM1-216ENST00000626660 IL15RAQ13261 267 aa14.64□□□□□ -0.07
SQSTM1-216ENST00000626660 RAB32Q13637 225 aa14.64□□□□□ -0.07
SQSTM1-216ENST00000626660 SLC16A13Q7RTY0 426 aa14.64□□□□□ -0.07
SQSTM1-216ENST00000626660 GPHB5Q86YW7 130 aa14.64□□□□□ -0.07
SQSTM1-216ENST00000626660 OR4X1Q8NH49 305 aa14.64□□□□□ -0.07
SQSTM1-216ENST00000626660 TMEM50AO95807 157 aa14.63□□□□□ -0.07
SQSTM1-216ENST00000626660 RLN2P04090 185 aa14.63□□□□□ -0.07
SQSTM1-216ENST00000626660 GPX4P36969 197 aaPredicted RBP14.63□□□□□ -0.07
SQSTM1-216ENST00000626660 RND2P52198 227 aa14.63□□□□□ -0.07
SQSTM1-216ENST00000626660 RELQ04864 619 aaPredicted RBP14.63□□□□□ -0.07
SQSTM1-216ENST00000626660 MLANAQ16655 118 aa14.63□□□□□ -0.07
SQSTM1-216ENST00000626660 C9orf66Q5T8R8 295 aa14.63□□□□□ -0.07
SQSTM1-216ENST00000626660 OR9G4Q8NGQ1 327 aa14.63□□□□□ -0.07
SQSTM1-216ENST00000626660 CACNG8Q8WXS5 425 aa14.63□□□□□ -0.07
SQSTM1-216ENST00000626660 SLC35E1Q96K37 410 aa14.63□□□□□ -0.07
SQSTM1-216ENST00000626660 CHRDL1Q9BU40 450 aa14.63□□□□□ -0.07
SQSTM1-216ENST00000626660 PEMTQ9UBM1 199 aa14.63□□□□□ -0.07
SQSTM1-216ENST00000626660 TRAV30A0A087WSZ9 112 aa14.62□□□□□ -0.07
SQSTM1-216ENST00000626660 CLN5O75503 358 aa14.62□□□□□ -0.07
SQSTM1-216ENST00000626660 CTSGP08311 255 aa14.62□□□□□ -0.07
SQSTM1-216ENST00000626660 BCAP31P51572 246 aa14.62□□□□□ -0.07
SQSTM1-216ENST00000626660 PAX9P55771 341 aa14.62□□□□□ -0.07
SQSTM1-216ENST00000626660 H2BFSP57053 126 aa14.62□□□□□ -0.07
SQSTM1-216ENST00000626660 PRSS54Q6PEW0 395 aa14.62□□□□□ -0.07
SQSTM1-216ENST00000626660 ACY3Q96HD9 319 aa14.62□□□□□ -0.07
SQSTM1-216ENST00000626660 IGHV3-35A0A0C4DH35 117 aa14.61□□□□□ -0.07
SQSTM1-216ENST00000626660 ZNF320A2RRD8 509 aa14.61□□□□□ -0.07
SQSTM1-216ENST00000626660 LGALS9O00182 355 aa14.61□□□□□ -0.07
SQSTM1-216ENST00000626660 SAP30O75446 220 aa14.61□□□□□ -0.07
SQSTM1-216ENST00000626660 ADMP35318 185 aa14.61□□□□□ -0.07
SQSTM1-216ENST00000626660 OR8G2PQ6IF36 304 aa14.61□□□□□ -0.07
SQSTM1-216ENST00000626660 REC114Q7Z4M0 266 aa14.61□□□□□ -0.07
SQSTM1-216ENST00000626660 TMEM116Q8NCL8 245 aa14.61□□□□□ -0.07
SQSTM1-216ENST00000626660 MRPL36Q9P0J6 103 aaKnown RBP14.61□□□□□ -0.07
SQSTM1-216ENST00000626660 NOTCH1P46531 2555 aa14.6□□□□□ -0.07
SQSTM1-216ENST00000626660 NDUFA4O00483 81 aa14.6□□□□□ -0.07
SQSTM1-216ENST00000626660 METTL15P1P0C7V9 234 aa14.6□□□□□ -0.07
SQSTM1-216ENST00000626660 INSL3P51460 131 aa14.6□□□□□ -0.07
SQSTM1-216ENST00000626660 CAV2P51636 162 aa14.6□□□□□ -0.07
SQSTM1-216ENST00000626660 FCN2Q15485 313 aa14.6□□□□□ -0.07
SQSTM1-216ENST00000626660 LRRC37A5PQ49AS3 106 aa14.6□□□□□ -0.07
SQSTM1-216ENST00000626660 OXLD1Q5BKU9 147 aa14.6□□□□□ -0.07
SQSTM1-216ENST00000626660 TMEM14EPQ6UXP3 125 aa14.6□□□□□ -0.07
SQSTM1-216ENST00000626660 NPIPB3Q92617 1050 aa14.6□□□□□ -0.07
SQSTM1-216ENST00000626660 ZNF436Q9C0F3 470 aaPredicted RBP14.6□□□□□ -0.07
SQSTM1-216ENST00000626660 G3V4G9 280 aa14.59□□□□□ -0.07
SQSTM1-216ENST00000626660 DEDDO75618 318 aa14.59□□□□□ -0.07
SQSTM1-216ENST00000626660 SCAF4O95104 1147 aaKnown RBP14.59□□□□□ -0.07
SQSTM1-216ENST00000626660 PET100P0DJ07 73 aa14.59□□□□□ -0.07
SQSTM1-216ENST00000626660 OR10J1P30954 320 aa14.59□□□□□ -0.07
SQSTM1-216ENST00000626660 RRAS2P62070 204 aaPredicted RBP14.59□□□□□ -0.07
SQSTM1-216ENST00000626660 SAMD5Q5TGI4 173 aa14.59□□□□□ -0.07
SQSTM1-216ENST00000626660 OR1S2Q8NGQ3 325 aa14.59□□□□□ -0.07
SQSTM1-216ENST00000626660 PPP1R1CQ8WVI7 109 aa14.59□□□□□ -0.07
SQSTM1-216ENST00000626660 UFC1Q9Y3C8 167 aa14.59□□□□□ -0.07
SQSTM1-216ENST00000626660 YIF1AO95070 293 aa14.58□□□□□ -0.08
SQSTM1-216ENST00000626660 CXCL3P19876 107 aa14.58□□□□□ -0.08
SQSTM1-216ENST00000626660 GAMTQ14353 236 aa14.58□□□□□ -0.08
SQSTM1-216ENST00000626660 ZNF600Q6ZNG1 722 aa14.58□□□□□ -0.08
SQSTM1-216ENST00000626660 OR10P1Q8NGE3 313 aa14.58□□□□□ -0.08
SQSTM1-216ENST00000626660 TMEM190Q8WZ59 177 aa14.58□□□□□ -0.08
SQSTM1-216ENST00000626660 C11orf1Q9H5F2 150 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms