RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 HOXD3P31249 432 aaPredicted RBP9.8□□□□□ -0.84
PNKP-217ENST00000625216 CHRNA7P36544 502 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 SULT1A1P50225 295 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 BAXQ07812 192 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 FHL3Q13643 280 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 KIAA0141Q14154 515 aaPredicted RBP9.8□□□□□ -0.84
PNKP-217ENST00000625216 BSXQ3C1V8 233 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 AKIRIN2Q53H80 203 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 C19orf54Q5BKX5 351 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 SLC24A4Q8NFF2 622 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 DUX3Q96PT4 197 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 HIPK2Q9H2X6 1198 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 PAIP2BQ9ULR5 123 aaKnown RBP9.8□□□□□ -0.84
PNKP-217ENST00000625216 FBXO7Q9Y3I1 522 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 PRSS46E5RG02 174 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 I3L521 148 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 IFNA10P01566 189 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 REG1AP05451 166 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 APELAP0DMC3 54 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 EGR2P11161 476 aaPredicted RBP9.79□□□□□ -0.84
PNKP-217ENST00000625216 NPY1RP25929 384 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 FXYD3Q14802 87 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 DEFB136Q30KP8 78 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 C9orf66Q5T8R8 295 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 OR8G2PQ6IF36 304 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 C19orf35Q6ZS72 473 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 STX12Q86Y82 276 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 TMEM217Q8N7C4 229 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 OR11H1Q8NG94 326 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 OR1N2Q8NGR9 330 aa9.79□□□□□ -0.84
PNKP-217ENST00000625216 FAM103A1Q9BTL3 118 aaKnown RBP9.79□□□□□ -0.84
PNKP-217ENST00000625216 WI2-2373I1.2A0A1W2PRP0 233 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 CFDP00746 253 aaPredicted RBP9.78□□□□□ -0.84
PNKP-217ENST00000625216 OR8U8P0C7N1 319 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 OR13C7P0DN81 318 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 C4BPBP20851 252 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 INSL3P51460 131 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 SLC38A11Q08AI6 406 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 ZNF616Q08AN1 781 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 CLINT1Q14677 625 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 ECSCRQ19T08 205 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 C2orf83Q53S99 150 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 DEFB121Q5J5C9 76 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 ASPHD1Q5U4P2 390 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 RPL7L1Q6DKI1 246 aaKnown RBP9.78□□□□□ -0.84
PNKP-217ENST00000625216 OR1S2Q8NGQ3 325 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 OR5C1Q8NGR4 320 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 ABHD5Q8WTS1 349 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 ARPC1AQ92747 370 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 ZNF471Q9BX82 626 aaPredicted RBP9.78□□□□□ -0.84
PNKP-217ENST00000625216 GNB4Q9HAV0 340 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 U3KQ87 197 aa9.78□□□□□ -0.84
PNKP-217ENST00000625216 TAAR5O14804 337 aa9.77□□□□□ -0.85
PNKP-217ENST00000625216 CNIH1O95406 144 aa9.77□□□□□ -0.85
PNKP-217ENST00000625216 HTR2BP41595 481 aa9.77□□□□□ -0.85
PNKP-217ENST00000625216 MFAP2P55001 183 aa9.77□□□□□ -0.85
PNKP-217ENST00000625216 UNQ5815/PRO19632Q6UWF5 114 aa9.77□□□□□ -0.85
PNKP-217ENST00000625216 SLC51BQ86UW2 128 aa9.77□□□□□ -0.85
PNKP-217ENST00000625216 ST8SIA2Q92186 375 aa9.77□□□□□ -0.85
PNKP-217ENST00000625216 TMEM68Q96MH6 324 aa9.77□□□□□ -0.85
PNKP-217ENST00000625216 ATP5SQ99766 215 aa9.77□□□□□ -0.85
PNKP-217ENST00000625216 SRSF8Q9BRL6 282 aaKnown RBP9.77□□□□□ -0.85
PNKP-217ENST00000625216 SLA2Q9H6Q3 261 aa9.77□□□□□ -0.85
PNKP-217ENST00000625216 DNAH9Q9NYC9 4486 aa9.76□□□□□ -0.85
PNKP-217ENST00000625216 SEC14L6B5MCN3 397 aa9.76□□□□□ -0.85
PNKP-217ENST00000625216 SOX15O60248 233 aa9.76□□□□□ -0.85
PNKP-217ENST00000625216 HBG1P69891 147 aa9.76□□□□□ -0.85
PNKP-217ENST00000625216 HBG2P69892 147 aa9.76□□□□□ -0.85
PNKP-217ENST00000625216 RPP30P78346 268 aaKnown RBP9.76□□□□□ -0.85
PNKP-217ENST00000625216 ERHP84090 104 aaKnown RBP9.76□□□□□ -0.85
PNKP-217ENST00000625216 LILRB2Q8N423 598 aa9.76□□□□□ -0.85
PNKP-217ENST00000625216 ZNF114Q8NC26 417 aa9.76□□□□□ -0.85
PNKP-217ENST00000625216 LFNGQ8NES3 379 aa9.76□□□□□ -0.85
PNKP-217ENST00000625216 STOML3Q8TAV4 291 aa9.76□□□□□ -0.85
PNKP-217ENST00000625216 H3BUA1 57 aa9.75□□□□□ -0.85
PNKP-217ENST00000625216 IFNA4P05014 189 aa9.75□□□□□ -0.85
PNKP-217ENST00000625216 LGALS1P09382 135 aaKnown RBP9.75□□□□□ -0.85
PNKP-217ENST00000625216 CTRB1P17538 263 aa9.75□□□□□ -0.85
PNKP-217ENST00000625216 SNCAP37840 140 aa9.75□□□□□ -0.85
PNKP-217ENST00000625216 RAB11AP62491 216 aa9.75□□□□□ -0.85
PNKP-217ENST00000625216 PVRIGQ6DKI7 326 aa9.75□□□□□ -0.85
PNKP-217ENST00000625216 CTRB2Q6GPI1 263 aa9.75□□□□□ -0.85
PNKP-217ENST00000625216 HSD17B13Q7Z5P4 300 aaPredicted RBP9.75□□□□□ -0.85
PNKP-217ENST00000625216 OR10P1Q8NGE3 313 aa9.75□□□□□ -0.85
PNKP-217ENST00000625216 OR5B12Q96R08 314 aa9.75□□□□□ -0.85
PNKP-217ENST00000625216 ARV1Q9H2C2 271 aa9.75□□□□□ -0.85
PNKP-217ENST00000625216 DMRT1Q9Y5R6 373 aa9.75□□□□□ -0.85
PNKP-217ENST00000625216 F11RQ9Y624 299 aaKnown RBP9.75□□□□□ -0.85
PNKP-217ENST00000625216 UBE2L5PA0A1B0GUS4 154 aa9.74□□□□□ -0.85
PNKP-217ENST00000625216 LINC01619G3V211 115 aa9.74□□□□□ -0.85
PNKP-217ENST00000625216 DFFBO76075 338 aa9.74□□□□□ -0.85
PNKP-217ENST00000625216 SCAF4O95104 1147 aaKnown RBP9.74□□□□□ -0.85
PNKP-217ENST00000625216 BRI3O95415 125 aa9.74□□□□□ -0.85
PNKP-217ENST00000625216 TPT1P13693 172 aaKnown RBP9.74□□□□□ -0.85
PNKP-217ENST00000625216 DLK1P80370 383 aa9.74□□□□□ -0.85
PNKP-217ENST00000625216 EXOSC2Q13868 293 aaKnown RBP9.74□□□□□ -0.85
PNKP-217ENST00000625216 VWC2Q2TAL6 325 aa9.74□□□□□ -0.85
PNKP-217ENST00000625216 UBAC2Q8NBM4 344 aa9.74□□□□□ -0.85
PNKP-217ENST00000625216 PINX1Q96BK5 328 aaKnown RBP9.74□□□□□ -0.85
PNKP-217ENST00000625216 TMEM147Q9BVK8 224 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms