RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ZNF439Q8NDP4 499 aa12.83□□□□□ -0.36
NPHP4-211ENST00000622020 C8orf88P0DMB2 117 aa12.83□□□□□ -0.36
NPHP4-211ENST00000622020 KIR2DS2P43631 304 aa12.83□□□□□ -0.36
NPHP4-211ENST00000622020 KLF3P57682 345 aaPredicted RBP12.83□□□□□ -0.36
NPHP4-211ENST00000622020 CCL8P80075 99 aa12.83□□□□□ -0.36
NPHP4-211ENST00000622020 DIAPH2-AS1Q14236 149 aa12.83□□□□□ -0.36
NPHP4-211ENST00000622020 ANKRD39Q53RE8 183 aa12.83□□□□□ -0.36
NPHP4-211ENST00000622020 SLC35E1Q96K37 410 aa12.83□□□□□ -0.36
NPHP4-211ENST00000622020 OSTCQ9NRP0 149 aa12.83□□□□□ -0.36
NPHP4-211ENST00000622020 TRAV9-1A0A075B6T8 112 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 UPK2O00526 184 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 ISLRO14498 428 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 HSBP1O75506 76 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 CRYABP02511 175 aaKnown RBP12.82□□□□□ -0.36
NPHP4-211ENST00000622020 PPOXP50336 477 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 FOXA3P55318 350 aaPredicted RBP12.82□□□□□ -0.36
NPHP4-211ENST00000622020 PRCDQ00LT1 54 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 GDF5OSQ5U4N7 250 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 C19orf35Q6ZS72 473 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 CORO2AQ92828 525 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 ZFP30Q9Y2G7 519 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 AMMECR1Q9Y4X0 333 aaPredicted RBP12.82□□□□□ -0.36
NPHP4-211ENST00000622020 TOX4O94842 621 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 IGLC2P0DOY2 106 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 IGLC3P0DOY3 106 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 CCL3L1P16619 93 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 TAS2R45P59539 299 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 C22orf34Q6ZV56 151 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 KIR3DL3Q8N743 410 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 OR2D3Q8NGH3 330 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 C18orf32Q8TCD1 76 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 NPIPB3Q92617 1050 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 COMMD5Q9GZQ3 224 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 PRNDQ9UKY0 176 aa12.82□□□□□ -0.36
NPHP4-211ENST00000622020 IGLV1-44P01699 117 aa12.81□□□□□ -0.36
NPHP4-211ENST00000622020 RPL19P84098 196 aaKnown RBP12.81□□□□□ -0.36
NPHP4-211ENST00000622020 HARBI1Q96MB7 349 aa12.81□□□□□ -0.36
NPHP4-211ENST00000622020 NDUFB8O95169 186 aa12.81□□□□□ -0.36
NPHP4-211ENST00000622020 CGB3P0DN86 165 aa12.81□□□□□ -0.36
NPHP4-211ENST00000622020 CGB7P0DN87 165 aa12.81□□□□□ -0.36
NPHP4-211ENST00000622020 ORM2P19652 201 aa12.81□□□□□ -0.36
NPHP4-211ENST00000622020 CTRLP40313 264 aa12.81□□□□□ -0.36
NPHP4-211ENST00000622020 UNQ5815/PRO19632Q6UWF5 114 aa12.81□□□□□ -0.36
NPHP4-211ENST00000622020 SLC25A2Q9BXI2 301 aa12.81□□□□□ -0.36
NPHP4-211ENST00000622020 MRPL20Q9BYC9 149 aaKnown RBP12.81□□□□□ -0.36
NPHP4-211ENST00000622020 CLEC5AQ9NY25 188 aa12.81□□□□□ -0.36
NPHP4-211ENST00000622020 DKK4Q9UBT3 224 aa12.81□□□□□ -0.36
NPHP4-211ENST00000622020 SLC25A10Q9UBX3 287 aaPredicted RBP12.81□□□□□ -0.36
NPHP4-211ENST00000622020 LAMTOR2Q9Y2Q5 125 aa12.81□□□□□ -0.36
NPHP4-211ENST00000622020 LY96Q9Y6Y9 160 aa12.81□□□□□ -0.36
NPHP4-211ENST00000622020 TMEM265A0A087WTH1 108 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 TRBV9A0A0B4J1U6 114 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 H0Y8G0 127 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 M0R2Z0 102 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 CCL25O15444 150 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 MT-ND6P03923 174 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 RNASE2P10153 161 aaKnown RBP12.8□□□□□ -0.36
NPHP4-211ENST00000622020 PRRX1P54821 245 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 GUSBP1Q15486 140 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 OR10J3Q5JRS4 329 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 SPACA3Q8IXA5 215 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 IGF2BP2-AS1Q96M15 143 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 MCRIP2Q9BUT9 160 aaKnown RBP12.8□□□□□ -0.36
NPHP4-211ENST00000622020 SLC25A15Q9Y619 301 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 PRR33A8MZF0 331 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 COX7A2P2O60397 106 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 HLA-DQA1P01909 254 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 RTL8BQ17RB0 113 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 TCF24Q7RTU0 167 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 NUP35Q8NFH5 326 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 CHODLQ9H9P2 273 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 MRPL36Q9P0J6 103 aaKnown RBP12.8□□□□□ -0.36
NPHP4-211ENST00000622020 UQCR10Q9UDW1 63 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 SMIM27A0A1W2PRY6 76 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 MOSP00540 346 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 PTTG1IPP53801 180 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 TNFAIP6P98066 277 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-211ENST00000622020 ETFRF1Q6IPR1 90 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 NUDT10Q8NFP7 164 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 NUDT11Q96G61 164 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 PLSCR4Q9NRQ2 329 aa12.8□□□□□ -0.36
NPHP4-211ENST00000622020 ZZEF1O43149 2961 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 C20orf202A1L168 122 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 HIGD1CA8MV81 97 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 CD69Q07108 199 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 MZT1Q08AG7 82 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 RUSC1-AS1Q66K80 236 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 LEMD1Q68G75 181 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 SARAFQ96BY9 339 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 FAM167A-AS1Q96KT0 104 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 IGHV3-72A0A0B4J1Y9 119 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 IZUMO1RA6ND01 250 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 ZNF137PP52743 207 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 DLX1P56177 255 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 EBLN2Q6P2I7 272 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 GUCD1Q96NT3 240 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 PAXXQ9BUH6 204 aa12.79□□□□□ -0.36
NPHP4-211ENST00000622020 FNDC4Q9H6D8 234 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-211ENST00000622020 IGHG3P01860 377 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 CR1LQ2VPA4 569 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms