RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 MUC21Q5SSG8 566 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 TMEM42Q69YG0 159 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 LCNL1Q6ZST4 164 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 Q71RC1 249 aaPredicted RBP8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 OR4D5Q8NGN0 318 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 TMEM250H0YL14 139 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 J3QRE1 110 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 M0R1W7 72 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 FGF16O43320 207 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 IGHG3P01860 377 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 KLRD1Q13241 179 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 PRELID3AQ96N28 172 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 POLEQ07864 2286 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 SRRM5B3KS81 715 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 LEPROTL1O95214 131 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 MSMBP08118 114 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 GAS1P54826 345 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 PIP4P2Q8N4L2 257 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 PRSS33Q8NF86 280 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 MRPL18Q9H0U6 180 aaKnown RBP8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 PLSCR2Q9NRY7 297 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 TRGV11A0A075B6L2 103 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 FAM71F2Q6NXP2 309 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 BIVMQ86UB2 503 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 OR10AG1Q8NH19 301 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 PSMG3Q9BT73 122 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 PARLQ9H300 379 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 ZNF257Q9Y2Q1 563 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 F8VVB4 439 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 F8VWA3 439 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 TFF1P04155 84 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 IGHV1-8P0DP01 117 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 CRYGSP22914 178 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 TMEM170BQ5T4T1 132 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 NPCDR1Q9BY65 106 aa8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 RPUSD1Q9UJJ7 312 aaKnown RBP8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 ZNF646O15015 1829 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-211ENST00000621271 LRRC37A2A6NM11 1700 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 A0A087WX48 190 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 LOC102724200A0A096LPH7 203 aaPredicted RBP8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 UBE2CO00762 179 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 DNAL4O96015 105 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 TPTE2P1Q5T6R2 138 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 CIARTQ8N365 385 aaPredicted RBP8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 ARL6IP6Q8N6S5 226 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 SRP19P09132 144 aaKnown RBP8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 UCP1P25874 307 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 E9PQ18 207 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 FOXG1P55316 489 aaPredicted RBP8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 CENPWQ5EE01 88 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 GCSAMLQ5JQS6 135 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 LRTM2Q8N967 370 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 C1QTNF4Q9BXJ3 329 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 RALGAPA2Q2PPJ7 1873 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 TRBV6-7A0A0A0MS04 114 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 LINC00271P0C7V0 271 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 SRSF3P84103 164 aaKnown RBP8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 HEPN1Q6WQI6 88 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 ZNF497Q6ZNH5 498 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 OR10S1Q8NGN2 331 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 CHCHD5Q9BSY4 110 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 RNF126Q9BV68 326 aa8.12□□□□□ -1.11
CLTCL1-211ENST00000621271 TRAV21A0A0B4J279 112 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 SCGB1A1P11684 91 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 RPL35AP18077 110 aaKnown RBP8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 ERASQ7Z444 233 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 MAPK1IP1LQ8NDC0 245 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 ASCL2Q99929 193 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 RTBDNQ9BSG5 229 aaPredicted RBP8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 REG4Q9BYZ8 158 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 PRO3102Q9H379 93 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 OR11H12B2RN74 326 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 VENTXO95231 258 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 C15orf32Q32M92 178 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 TMEM200BQ69YZ2 307 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 PRADC1Q9BSG0 188 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 PARD6GQ9BYG4 376 aaPredicted RBP8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 TBL2Q9Y4P3 447 aaKnown RBP8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 LOC107984156A0A0G2JMH3 177 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 GRIFINA4D1Z8 144 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 C15orf61A6NNL5 157 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 ARL17AQ8IVW1 177 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 FMC1Q96HJ9 113 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 C7orf71A4D174 169 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 PEX7O00628 323 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 HBBP68871 147 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 SIGLEC15Q6ZMC9 328 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 HIST1H4GQ99525 98 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 Q9H3A6 140 aa8.11□□□□□ -1.11
CLTCL1-211ENST00000621271 LY6HO94772 140 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 CGAP01215 116 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 TMEM144Q7Z5S9 345 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 FGFBP3Q8TAT2 258 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 TRBV9A0A0B4J1U6 114 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 FABP5P3A8MUU1 101 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 OVOL1O14753 267 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 SOD3P08294 240 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 FOLR2P14207 255 aa8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 IGFBP3P17936 291 aaPredicted RBP8.1□□□□□ -1.11
CLTCL1-211ENST00000621271 CNTFRP26992 372 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms