RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 NPBWR1P48145 328 aa13.9□□□□□ -0.18
LITAF-220ENST00000620789 UNQ9165/PRO28630Q6UXU0 137 aa13.9□□□□□ -0.18
LITAF-220ENST00000620789 HAPLN4Q86UW8 402 aa13.9□□□□□ -0.18
LITAF-220ENST00000620789 ZNF256Q9Y2P7 627 aaPredicted RBP13.9□□□□□ -0.18
LITAF-220ENST00000620789 RPS10-NUDT3A0A1W2PQS6 291 aa13.89□□□□□ -0.19
LITAF-220ENST00000620789 WI2-2373I1.2A0A1W2PRP0 233 aa13.89□□□□□ -0.19
LITAF-220ENST00000620789 C2orf70A6NJV1 201 aa13.89□□□□□ -0.19
LITAF-220ENST00000620789 SYNGR2O43760 224 aa13.89□□□□□ -0.19
LITAF-220ENST00000620789 IL5P05113 134 aa13.89□□□□□ -0.19
LITAF-220ENST00000620789 ATP5IP56385 69 aaPredicted RBP13.89□□□□□ -0.19
LITAF-220ENST00000620789 ADAMTSL5Q6ZMM2 481 aa13.89□□□□□ -0.19
LITAF-220ENST00000620789 OR4D5Q8NGN0 318 aa13.89□□□□□ -0.19
LITAF-220ENST00000620789 TMEM190Q8WZ59 177 aa13.89□□□□□ -0.19
LITAF-220ENST00000620789 MAGT1Q9H0U3 335 aa13.89□□□□□ -0.19
LITAF-220ENST00000620789 PALMDQ9NP74 551 aa13.89□□□□□ -0.19
LITAF-220ENST00000620789 PRKDCP78527 4128 aaKnown RBP13.88□□□□□ -0.19
LITAF-220ENST00000620789 TMEM213A2RRL7 107 aa13.88□□□□□ -0.19
LITAF-220ENST00000620789 K7EIL1 84 aa13.88□□□□□ -0.19
LITAF-220ENST00000620789 NDUFA4O00483 81 aa13.88□□□□□ -0.19
LITAF-220ENST00000620789 IAPPP10997 89 aa13.88□□□□□ -0.19
LITAF-220ENST00000620789 RELQ04864 619 aaPredicted RBP13.88□□□□□ -0.19
LITAF-220ENST00000620789 MLANAQ16655 118 aa13.88□□□□□ -0.19
LITAF-220ENST00000620789 IAH1Q2TAA2 248 aaPredicted RBP13.88□□□□□ -0.19
LITAF-220ENST00000620789 C12orf45Q8N5I9 185 aaPredicted RBP13.88□□□□□ -0.19
LITAF-220ENST00000620789 OR4X1Q8NH49 305 aa13.88□□□□□ -0.19
LITAF-220ENST00000620789 MRAPQ8TCY5 172 aa13.88□□□□□ -0.19
LITAF-220ENST00000620789 OR10C1Q96KK4 312 aa13.88□□□□□ -0.19
LITAF-220ENST00000620789 CIB3Q96Q77 187 aaPredicted RBP13.88□□□□□ -0.19
LITAF-220ENST00000620789 MRPL36Q9P0J6 103 aaKnown RBP13.88□□□□□ -0.19
LITAF-220ENST00000620789 UFC1Q9Y3C8 167 aa13.88□□□□□ -0.19
LITAF-220ENST00000620789 FOLR2P14207 255 aa13.87□□□□□ -0.19
LITAF-220ENST00000620789 SPNP16150 400 aa13.87□□□□□ -0.19
LITAF-220ENST00000620789 EDN2P20800 178 aa13.87□□□□□ -0.19
LITAF-220ENST00000620789 NKX2-1P43699 371 aaPredicted RBP13.87□□□□□ -0.19
LITAF-220ENST00000620789 ELLP55199 621 aaPredicted RBP13.87□□□□□ -0.19
LITAF-220ENST00000620789 ID3Q02535 119 aa13.87□□□□□ -0.19
LITAF-220ENST00000620789 UXS1Q8NBZ7 420 aa13.87□□□□□ -0.19
LITAF-220ENST00000620789 ZNF414Q96IQ9 312 aa13.87□□□□□ -0.19
LITAF-220ENST00000620789 PRR25Q96S07 402 aa13.87□□□□□ -0.19
LITAF-220ENST00000620789 WRBO00258 174 aa13.86□□□□□ -0.19
LITAF-220ENST00000620789 CCSO14618 274 aa13.86□□□□□ -0.19
LITAF-220ENST00000620789 CLN5O75503 358 aa13.86□□□□□ -0.19
LITAF-220ENST00000620789 LY86O95711 162 aa13.86□□□□□ -0.19
LITAF-220ENST00000620789 TMEM50AO95807 157 aa13.86□□□□□ -0.19
LITAF-220ENST00000620789 SLC25A4P12235 298 aa13.86□□□□□ -0.19
LITAF-220ENST00000620789 CBLN1P23435 193 aa13.86□□□□□ -0.19
LITAF-220ENST00000620789 TM4SF20Q53R12 229 aa13.86□□□□□ -0.19
LITAF-220ENST00000620789 ETFRF1Q6IPR1 90 aa13.86□□□□□ -0.19
LITAF-220ENST00000620789 ZBTB8BQ8NAP8 495 aaPredicted RBP13.86□□□□□ -0.19
LITAF-220ENST00000620789 CACNG8Q8WXS5 425 aa13.86□□□□□ -0.19
LITAF-220ENST00000620789 GPN1Q9HCN4 374 aaPredicted RBP13.86□□□□□ -0.19
LITAF-220ENST00000620789 C15orf62A8K5M9 175 aa13.85□□□□□ -0.19
LITAF-220ENST00000620789 INMT-MINDY4F8WBC2 141 aa13.85□□□□□ -0.19
LITAF-220ENST00000620789 PRAF2O60831 178 aa13.85□□□□□ -0.19
LITAF-220ENST00000620789 IFNA4P05014 189 aa13.85□□□□□ -0.19
LITAF-220ENST00000620789 GP9P14770 177 aa13.85□□□□□ -0.19
LITAF-220ENST00000620789 POLR2GP62487 172 aaKnown RBP eCLIP13.85□□□□□ -0.19
LITAF-220ENST00000620789 RPP30P78346 268 aaKnown RBP13.85□□□□□ -0.19
LITAF-220ENST00000620789 PRSS54Q6PEW0 395 aa13.85□□□□□ -0.19
LITAF-220ENST00000620789 TMEM116Q8NCL8 245 aa13.85□□□□□ -0.19
LITAF-220ENST00000620789 OR2K2Q8NGT1 345 aa13.85□□□□□ -0.19
LITAF-220ENST00000620789 DYNLRB2Q8TF09 96 aa13.85□□□□□ -0.19
LITAF-220ENST00000620789 MARC2Q969Z3 335 aa13.85□□□□□ -0.19
LITAF-220ENST00000620789 MARVELD1Q9BSK0 173 aa13.85□□□□□ -0.19
LITAF-220ENST00000620789 DAZ1Q9NQZ3 744 aaKnown RBP13.85□□□□□ -0.19
LITAF-220ENST00000620789 GSKIPQ9P0R6 139 aa13.85□□□□□ -0.19
LITAF-220ENST00000620789 SCGB2A1O75556 95 aa13.84□□□□□ -0.19
LITAF-220ENST00000620789 C8orf88P0DMB2 117 aa13.84□□□□□ -0.19
LITAF-220ENST00000620789 RND2P52198 227 aa13.84□□□□□ -0.19
LITAF-220ENST00000620789 RAB11AP62491 216 aa13.84□□□□□ -0.19
LITAF-220ENST00000620789 CD69Q07108 199 aa13.84□□□□□ -0.19
LITAF-220ENST00000620789 LCN12Q6JVE5 192 aa13.84□□□□□ -0.19
LITAF-220ENST00000620789 SLC16A13Q7RTY0 426 aa13.84□□□□□ -0.19
LITAF-220ENST00000620789 C20orf24Q9BUV8 137 aa13.84□□□□□ -0.19
LITAF-220ENST00000620789 TECRQ9NZ01 308 aaKnown RBP13.84□□□□□ -0.19
LITAF-220ENST00000620789 MRPL27Q9P0M9 148 aaKnown RBP13.84□□□□□ -0.19
LITAF-220ENST00000620789 IGHV3OR16-8A0A075B7F1 116 aa13.83□□□□□ -0.2
LITAF-220ENST00000620789 TRAV30A0A087WSZ9 112 aa13.83□□□□□ -0.2
LITAF-220ENST00000620789 SNRPGP15A8MWD9 76 aa13.83□□□□□ -0.2
LITAF-220ENST00000620789 FAM25EA8MYX2 175 aa13.83□□□□□ -0.2
LITAF-220ENST00000620789 K7EMT4 169 aa13.83□□□□□ -0.2
LITAF-220ENST00000620789 SSSCA1O60232 199 aa13.83□□□□□ -0.2
LITAF-220ENST00000620789 YIF1AO95070 293 aa13.83□□□□□ -0.2
LITAF-220ENST00000620789 SCGB1D2O95969 90 aa13.83□□□□□ -0.2
LITAF-220ENST00000620789 DEFB114Q30KQ6 69 aa13.83□□□□□ -0.2
LITAF-220ENST00000620789 CD300EQ496F6 205 aaPredicted RBP13.83□□□□□ -0.2
LITAF-220ENST00000620789 ZNF600Q6ZNG1 722 aa13.83□□□□□ -0.2
LITAF-220ENST00000620789 PAIP2BQ9ULR5 123 aaKnown RBP13.83□□□□□ -0.2
LITAF-220ENST00000620789 SORL1Q92673 2214 aa13.83□□□□□ -0.2
LITAF-220ENST00000620789 IZUMO1RA6ND01 250 aa13.82□□□□□ -0.2
LITAF-220ENST00000620789 C5orf51A6NDU8 294 aa13.82□□□□□ -0.2
LITAF-220ENST00000620789 GPX4P36969 197 aaPredicted RBP13.82□□□□□ -0.2
LITAF-220ENST00000620789 SPANXN5Q5MJ07 72 aa13.82□□□□□ -0.2
LITAF-220ENST00000620789 ACY3Q96HD9 319 aa13.82□□□□□ -0.2
LITAF-220ENST00000620789 MLXQ9UH92 298 aa13.82□□□□□ -0.2
LITAF-220ENST00000620789 STRAPQ9Y3F4 350 aaKnown RBP13.82□□□□□ -0.2
LITAF-220ENST00000620789 H3BP45 60 aa13.81□□□□□ -0.2
LITAF-220ENST00000620789 IGKV1-17P01599 117 aa13.81□□□□□ -0.2
LITAF-220ENST00000620789 MBPP02686 304 aaPredicted RBP13.81□□□□□ -0.2
LITAF-220ENST00000620789 IGLC1P0CG04 106 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms