RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 MTURNQ8N3F0 131 aa8.07□□□□□ -1.12
TNFAIP3-210ENST00000620204 MRPL27Q9P0M9 148 aaKnown RBP8.07□□□□□ -1.12
TNFAIP3-210ENST00000620204 POLDIP2Q9Y2S7 368 aa8.07□□□□□ -1.12
TNFAIP3-210ENST00000620204 PPIAL4CA0A0B4J2A2 164 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 PPIAL4GP0DN37 164 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 GCSHP23434 173 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 ARR3P36575 388 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 C3AR1Q16581 482 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 FADS6Q8N9I5 356 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 JKAMPQ9P055 326 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 SERTM2A0A1B0GWG4 89 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 GGTLC3B5MD39 225 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 MT-CO3P00414 261 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 SLC25A5P05141 298 aaKnown RBP8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 ZNF497Q6ZNH5 498 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 SF3B5Q9BWJ5 86 aaKnown RBP8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 ACACAQ13085 2346 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 A0A1B0GV72 72 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 NDUFS8O00217 210 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 NBEAP1P0C6P0 100 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 SP9P0CG40 484 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 SRSF7Q16629 238 aaKnown RBP eCLIP8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 ALKBH6Q3KRA9 238 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 TMEM140Q9NV12 185 aa8.06□□□□□ -1.12
TNFAIP3-210ENST00000620204 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 FABP2P12104 132 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 GDF5OSQ5U4N7 250 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 FA2HQ7L5A8 372 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 SLC25A40Q8TBP6 338 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 SIGMAR1Q99720 223 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 COMMD5Q9GZQ3 224 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 OR51B2Q9Y5P1 312 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 TANC2Q9HCD6 1990 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 KIR3DS1Q14943 382 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 GUSBP1Q15486 140 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 Q6ZSR3 168 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 MPC1Q9Y5U8 109 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 OTOGLQ3ZCN5 2332 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 IGHV1-24A0A0C4DH33 117 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 AREGP15514 252 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 FOXF2Q12947 444 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 KMT2EQ8IZD2 1858 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 OR9G1Q8NH87 305 aa8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 FLYWCH2Q96CP2 140 aaKnown RBP8.05□□□□□ -1.12
TNFAIP3-210ENST00000620204 ZNF716A6NP11 495 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 RBPJQ06330 500 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 OR1C1Q15619 314 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 Q6P435 159 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 OR13A1Q8NGR1 328 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 C5orf30Q96GV9 206 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 TMUB1Q9BVT8 246 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 HSPB8Q9UJY1 196 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 TEX48A0A1B0GUV7 120 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 ZNF503-AS2A6NEH8 195 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 OOEPA6NGQ2 149 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 COX7A2P2O60397 106 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 GFRA3O60609 400 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 ORM2P19652 201 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 ZBTB34Q8NCN2 500 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 IGLV3-32A0A0A0MS00 114 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 G3V4G9 280 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 KLK10O43240 276 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 P01737 135 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 REG1AP05451 166 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 ADH4P08319 380 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 BRWD1-AS2P59051 145 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 SCGB2A2Q13296 93 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 FOXE3Q13461 319 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 Q8N7P7 452 aa8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 RBMXL3Q8N7X1 1067 aaKnown RBP8.04□□□□□ -1.12
TNFAIP3-210ENST00000620204 AKAP6Q13023 2319 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 TEX50A0A1B0GTY4 177 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 LIPFP07098 398 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 HBBP68871 147 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 TMEM177Q53S58 311 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 FAM162BQ5T6X4 162 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 ADTRPQ96IZ2 230 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 NAV3Q8IVL0 2385 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 SMIM27A0A1W2PRY6 76 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 K7EMI3 77 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 APOHP02749 345 aaPredicted RBP8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 LINC00596Q86U02 117 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 OR10W1Q8NGF6 305 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 CHODLQ9H9P2 273 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 TSSC4Q9Y5U2 329 aaPredicted RBP8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 C8orf88P0DMB2 117 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 RABAC1Q9UI14 185 aa8.03□□□□□ -1.12
TNFAIP3-210ENST00000620204 DSCAML1Q8TD84 2053 aa8.02□□□□□ -1.12
TNFAIP3-210ENST00000620204 PPIAL4EA0A075B759 164 aa8.02□□□□□ -1.13
TNFAIP3-210ENST00000620204 A1L4Q6 167 aa8.02□□□□□ -1.13
TNFAIP3-210ENST00000620204 J3QR89 54 aa8.02□□□□□ -1.13
TNFAIP3-210ENST00000620204 PPIAL4FP0DN26 164 aa8.02□□□□□ -1.13
TNFAIP3-210ENST00000620204 COL8A1P27658 744 aa8.02□□□□□ -1.13
TNFAIP3-210ENST00000620204 C17orf82Q86X59 251 aaPredicted RBP8.02□□□□□ -1.13
TNFAIP3-210ENST00000620204 GRAMD2BQ96HH9 432 aa8.02□□□□□ -1.13
TNFAIP3-210ENST00000620204 ASCL2Q99929 193 aa8.02□□□□□ -1.13
TNFAIP3-210ENST00000620204 AP5S1Q9NUS5 200 aa8.02□□□□□ -1.13
TNFAIP3-210ENST00000620204 NBASA2RRP1 2371 aa8.02□□□□□ -1.13
TNFAIP3-210ENST00000620204 PGPA6NDG6 321 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms