RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 F2Z2F3 143 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 THADAQ6YHU6 1953 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 MGST3O14880 152 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 UTF1Q5T230 341 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 OCC1Q8TAD7 63 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 TMEM229AB2RXF0 380 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 RAX2Q96IS3 184 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 REG1AP05451 166 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 IGHV3OR16-12A0A075B7B8 117 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 TRAV41A0A0B4J266 112 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 TRGV8A0A0C4DH27 118 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 SOCS3O14543 225 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 GZMMP51124 257 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 C17orf99Q6UX52 265 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 WFDC12Q8WWY7 111 aa12.74□□□□□ -0.37
COL5A1-208ENST00000618395 LEPROTO15243 131 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 GFRALQ6UXV0 394 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 ANKRD29Q8N6D5 301 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 Q96M66 194 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 NPIPB3Q92617 1050 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 UBL5Q9BZL1 73 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 PLEKHB2Q96CS7 222 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 ZNF385AQ96PM9 386 aaKnown RBP12.73□□□□□ -0.37
COL5A1-208ENST00000618395 KCNK17Q96T54 332 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 UPK3AO75631 287 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 PAX1P15863 534 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 LIMS1P48059 325 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 PCSK4Q6UW60 755 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 hCG_38984A0A1B0GV85 526 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 IGHV3-64A0A075B6Q5 118 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 CEACAM5P06731 702 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 ASCL2Q99929 193 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 GLRXP35754 106 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 NOVP48745 357 aa12.73□□□□□ -0.37
COL5A1-208ENST00000618395 ZNF703Q9H7S9 590 aaPredicted RBP12.73□□□□□ -0.37
COL5A1-208ENST00000618395 DMRTC2Q8IXT2 367 aaPredicted RBP12.72□□□□□ -0.37
COL5A1-208ENST00000618395 TEX45Q8NA69 505 aa12.72□□□□□ -0.37
COL5A1-208ENST00000618395 JPT2Q9H910 190 aa12.72□□□□□ -0.37
COL5A1-208ENST00000618395 CCL4L1Q8NHW4 92 aa12.72□□□□□ -0.37
COL5A1-208ENST00000618395 FAM106CPP0CH98 169 aa12.72□□□□□ -0.37
COL5A1-208ENST00000618395 SAXO1Q8IYX7 474 aa12.72□□□□□ -0.37
COL5A1-208ENST00000618395 TSC2P49815 1807 aa12.72□□□□□ -0.37
COL5A1-208ENST00000618395 A0A1B0GTI1 187 aa12.72□□□□□ -0.37
COL5A1-208ENST00000618395 GFERP55789 205 aa12.72□□□□□ -0.37
COL5A1-208ENST00000618395 PTCRAQ6ISU1 281 aaPredicted RBP12.72□□□□□ -0.37
COL5A1-208ENST00000618395 TMEM74BQ9NUR3 256 aa12.72□□□□□ -0.37
COL5A1-208ENST00000618395 C5orf47Q569G3 176 aa12.72□□□□□ -0.37
COL5A1-208ENST00000618395 CT62P0C5K7 136 aa12.72□□□□□ -0.37
COL5A1-208ENST00000618395 MESP2Q0VG99 397 aa12.72□□□□□ -0.37
COL5A1-208ENST00000618395 ZXDCQ2QGD7 858 aaPredicted RBP12.72□□□□□ -0.37
COL5A1-208ENST00000618395 SLC25A48Q6ZT89 311 aaKnown RBP12.72□□□□□ -0.37
COL5A1-208ENST00000618395 V9GYY9 64 aa12.72□□□□□ -0.37
COL5A1-208ENST00000618395 NPPCP23582 126 aa12.72□□□□□ -0.37
COL5A1-208ENST00000618395 MRPL55Q7Z7F7 128 aaKnown RBP12.72□□□□□ -0.37
COL5A1-208ENST00000618395 LILRA5A6NI73 299 aa12.71□□□□□ -0.37
COL5A1-208ENST00000618395 USF3Q68DE3 2245 aa12.71□□□□□ -0.37
COL5A1-208ENST00000618395 DEFB109BQ30KR1 87 aa12.71□□□□□ -0.37
COL5A1-208ENST00000618395 AGMATQ9BSE5 352 aa12.71□□□□□ -0.37
COL5A1-208ENST00000618395 MALRD1Q5VYJ5 2156 aa12.71□□□□□ -0.37
COL5A1-208ENST00000618395 EXPH5Q8NEV8 1989 aa12.71□□□□□ -0.37
COL5A1-208ENST00000618395 IGKV1D-42A0A075B6H8 117 aa12.71□□□□□ -0.37
COL5A1-208ENST00000618395 MGAMO43451 1857 aa12.71□□□□□ -0.37
COL5A1-208ENST00000618395 SPINK2P20155 84 aa12.71□□□□□ -0.37
COL5A1-208ENST00000618395 MPV17P39210 176 aa12.71□□□□□ -0.37
COL5A1-208ENST00000618395 SLC25A28Q96A46 364 aa12.71□□□□□ -0.37
COL5A1-208ENST00000618395 SRFP11831 508 aa12.71□□□□□ -0.38
COL5A1-208ENST00000618395 BGLAPP02818 100 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 OR9G1Q8NH87 305 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 CD28P10747 220 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 GNG5P63218 68 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 TMEM42Q69YG0 159 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 FABP5P3A8MUU1 101 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 PTGDSP41222 190 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 ZPLD1Q8TCW7 415 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 ZNF625Q96I27 306 aaPredicted RBP12.7□□□□□ -0.38
COL5A1-208ENST00000618395 SBF1O95248 1867 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 SRSF8Q9BRL6 282 aaKnown RBP12.7□□□□□ -0.38
COL5A1-208ENST00000618395 RTBDNQ9BSG5 229 aaPredicted RBP12.7□□□□□ -0.38
COL5A1-208ENST00000618395 SCRT1Q9BWW7 348 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 HCSTQ9UBK5 93 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 ZNF525Q8N782 197 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 CACNG8Q8WXS5 425 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 OTORQ9NRC9 128 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 CALYQ9NYX4 217 aa12.7□□□□□ -0.38
COL5A1-208ENST00000618395 TRAV13-1A0A0B4J241 112 aa12.69□□□□□ -0.38
COL5A1-208ENST00000618395 TRAV1-1A0A0B4J248 108 aa12.69□□□□□ -0.38
COL5A1-208ENST00000618395 FNDC10F2Z333 226 aa12.69□□□□□ -0.38
COL5A1-208ENST00000618395 TCTEX1D4Q5JR98 221 aa12.69□□□□□ -0.38
COL5A1-208ENST00000618395 IGHV3-48P01763 117 aa12.69□□□□□ -0.38
COL5A1-208ENST00000618395 HOXD3P31249 432 aaPredicted RBP12.69□□□□□ -0.38
COL5A1-208ENST00000618395 LINC00158P58513 81 aa12.69□□□□□ -0.38
COL5A1-208ENST00000618395 BRK1Q8WUW1 75 aa12.69□□□□□ -0.38
COL5A1-208ENST00000618395 WFDC6Q9BQY6 131 aa12.69□□□□□ -0.38
COL5A1-208ENST00000618395 IGHG4P01861 327 aa12.69□□□□□ -0.38
COL5A1-208ENST00000618395 PRSS41Q7RTY9 318 aa12.69□□□□□ -0.38
COL5A1-208ENST00000618395 VEGFBP49765 207 aa12.69□□□□□ -0.38
COL5A1-208ENST00000618395 RPL32P62910 135 aaKnown RBP12.69□□□□□ -0.38
COL5A1-208ENST00000618395 EGR4Q05215 589 aa12.69□□□□□ -0.38
COL5A1-208ENST00000618395 DUSP15Q9H1R2 295 aaPredicted RBP12.69□□□□□ -0.38
COL5A1-208ENST00000618395 CXorf51AA0A1B0GTR3 108 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms