RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ASCL2Q99929 193 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 TP53BP1Q12888 1972 aaPredicted RBP8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 DUTP33316 252 aaKnown RBP8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 POLR2AP24928 1970 aaKnown RBP8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 COL4A5P29400 1685 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 LOC105371242A0A075B767 164 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 SAA2-SAA4A0A096LPE2 208 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 A0A0G2JLM5 398 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 A8MWV9 139 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 EREGO14944 169 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 OR9G9P0C7N8 305 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 SAA2P0DJI9 122 aaPredicted RBP8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 PRCDQ00LT1 54 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 MPV17L2Q567V2 206 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 C1orf162Q8NEQ5 155 aaPredicted RBP8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 DPM3Q9P2X0 92 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 PSG8Q9UQ74 426 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 LINC00312Q9Y6C7 94 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 LY96Q9Y6Y9 160 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 GBF1Q92538 1859 aa8.89□□□□□ -0.99
CLTCL1-209ENST00000617103 SNRPD3P62318 126 aaKnown RBP8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 MST1LQ2TV78 715 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 TMEM14EPQ6UXP3 125 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 CRIM1Q9NZV1 1036 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 RFNGQ9Y644 331 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 RALGAPA1Q6GYQ0 2036 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 IGLV3-32A0A0A0MS00 114 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 IGKCP01834 107 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 CELA3AP09093 270 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 HGFACQ04756 655 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 SRSF1Q07955 248 aaKnown RBP eCLIP8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 FAM201AQ5SY85 155 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 FBXL7Q9UJT9 491 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 S4R3C0 116 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 ARID2Q68CP9 1835 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 NPFFO15130 113 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 LINC01559Q495D7 138 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 TPTE2P1Q5T6R2 138 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 LCN12Q6JVE5 192 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 SMPXQ9UHP9 88 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 TNFRSF18Q9Y5U5 241 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 SPTBN1Q01082 2364 aaKnown RBP8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 MPDZO75970 2070 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 RGPD3A6NKT7 1758 aaPredicted RBP8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 RGPD4Q7Z3J3 1758 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 DOPEY2Q9Y3R5 2298 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 CRYGSP22914 178 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 TMEM95Q3KNT9 176 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 FAM90A2PQ658T7 463 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 SLC25A48Q6ZT89 311 aaKnown RBP8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 CYSLTR1Q9Y271 337 aa8.88□□□□□ -0.99
CLTCL1-209ENST00000617103 PSMB11A5LHX3 300 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 FLVCR1-AS1Q8TAF5 88 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 FGF11Q92914 225 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 MRPL27Q9P0M9 148 aaKnown RBP8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 RNF115Q9Y4L5 304 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 COL5A3P25940 1745 aaPredicted RBP8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 IGHV3OR16-12A0A075B7B8 117 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 IGHV3-49A0A0A0MS15 119 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 C9JQL5 133 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 H3BRM9 83 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 IMMP1LQ96LU5 166 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 MRPS18CQ9Y3D5 142 aaKnown RBP8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 DOCK4Q8N1I0 1966 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 IGHV2-70P01814 119 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 CD33P20138 364 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 PVRIGQ6DKI7 326 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 SIGLEC12Q96PQ1 595 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 CHD5Q8TDI0 1954 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 IGLV3-12A0A075B6K2 115 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 IGHV2OR16-5A0A0B4J2B6 119 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 LOXL4Q96JB6 756 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 C20orf144Q9BQM9 153 aa8.87□□□□□ -0.99
CLTCL1-209ENST00000617103 ORMDL2Q53FV1 153 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 NAA38Q9BRA0 125 aaKnown RBP8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 MTCL1Q9Y4B5 1905 aaKnown RBP8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 B9A039 149 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 FTH1P19P0C7X4 201 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 BCL6BQ8N143 479 aaPredicted RBP8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 PRR7Q8TB68 274 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 ZNF815PA8K554 130 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 IGKV1-5P01602 117 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 IGHV3-23P01764 117 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 QRFPP83859 136 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 GAGE2BQ13066 116 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 GAGE2EQ4V326 116 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 RNF125Q96EQ8 232 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 GAGE2DQ9UEU5 116 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 PARP14Q460N5 1801 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 TAF1LQ8IZX4 1826 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 CKS1BP61024 79 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 GUSBP1Q15486 140 aa8.86□□□□□ -0.99
CLTCL1-209ENST00000617103 IGHV3-66A0A0C4DH42 116 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 hDV102S1A0JD36 115 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 GAGE12BA1L429 117 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 IGKV3-20P01619 116 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 SPSB3Q6PJ21 355 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 JMJD8Q96S16 334 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 CACNA1EQ15878 2313 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 A0A0G2JMM0 328 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms