RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 EGFEM1PQ0D2K5 195 aa12.67□□□□□ -0.38
IRF1-211ENST00000613424 FAM106AQ4KMX7 169 aa12.67□□□□□ -0.38
IRF1-211ENST00000613424 SPSB3Q6PJ21 355 aa12.67□□□□□ -0.38
IRF1-211ENST00000613424 RNASEH2CQ8TDP1 164 aaKnown RBP12.67□□□□□ -0.38
IRF1-211ENST00000613424 OR4C12Q96R67 309 aa12.67□□□□□ -0.38
IRF1-211ENST00000613424 GAR1Q9NY12 217 aaKnown RBP12.67□□□□□ -0.38
IRF1-211ENST00000613424 C5orf51A6NDU8 294 aa12.66□□□□□ -0.38
IRF1-211ENST00000613424 SNRPGP15A8MWD9 76 aa12.66□□□□□ -0.38
IRF1-211ENST00000613424 FAM25EA8MYX2 175 aa12.66□□□□□ -0.38
IRF1-211ENST00000613424 LGALS9O00182 355 aa12.66□□□□□ -0.38
IRF1-211ENST00000613424 CSN3P07498 182 aa12.66□□□□□ -0.38
IRF1-211ENST00000613424 NPBWR1P48145 328 aa12.66□□□□□ -0.38
IRF1-211ENST00000613424 ATP5IP56385 69 aaPredicted RBP12.66□□□□□ -0.38
IRF1-211ENST00000613424 POLR2GP62487 172 aaKnown RBP eCLIP12.66□□□□□ -0.38
IRF1-211ENST00000613424 REC114Q7Z4M0 266 aa12.66□□□□□ -0.38
IRF1-211ENST00000613424 CIB3Q96Q77 187 aaPredicted RBP12.66□□□□□ -0.38
IRF1-211ENST00000613424 ZNF436Q9C0F3 470 aaPredicted RBP12.66□□□□□ -0.38
IRF1-211ENST00000613424 PALMDQ9NP74 551 aa12.66□□□□□ -0.38
IRF1-211ENST00000613424 MRPL36Q9P0J6 103 aaKnown RBP12.66□□□□□ -0.38
IRF1-211ENST00000613424 PEMTQ9UBM1 199 aa12.66□□□□□ -0.38
IRF1-211ENST00000613424 RPS10-NUDT3A0A1W2PQS6 291 aa12.65□□□□□ -0.38
IRF1-211ENST00000613424 ZNF320A2RRD8 509 aa12.65□□□□□ -0.38
IRF1-211ENST00000613424 NUPL2O15504 423 aaKnown RBP12.65□□□□□ -0.38
IRF1-211ENST00000613424 GNG7O60262 68 aa12.65□□□□□ -0.38
IRF1-211ENST00000613424 TMEM50AO95807 157 aa12.65□□□□□ -0.38
IRF1-211ENST00000613424 PTTG1O95997 202 aa12.65□□□□□ -0.38
IRF1-211ENST00000613424 PRB2P02812 416 aaPredicted RBP12.65□□□□□ -0.38
IRF1-211ENST00000613424 UNQ9165/PRO28630Q6UXU0 137 aa12.65□□□□□ -0.38
IRF1-211ENST00000613424 MEGF8Q7Z7M0 2845 aa12.64□□□□□ -0.39
IRF1-211ENST00000613424 C15orf62A8K5M9 175 aa12.64□□□□□ -0.39
IRF1-211ENST00000613424 SCGB1D2O95969 90 aa12.64□□□□□ -0.39
IRF1-211ENST00000613424 IFNA4P05014 189 aa12.64□□□□□ -0.39
IRF1-211ENST00000613424 OR4X1Q8NH49 305 aa12.64□□□□□ -0.39
IRF1-211ENST00000613424 ZNF414Q96IQ9 312 aa12.64□□□□□ -0.39
IRF1-211ENST00000613424 C2orf50Q96LR7 162 aa12.64□□□□□ -0.39
IRF1-211ENST00000613424 SIGLEC8Q9NYZ4 499 aa12.64□□□□□ -0.39
IRF1-211ENST00000613424 C2orf70A6NJV1 201 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 NDUFA4O00483 81 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 SSSCA1O60232 199 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 CLN5O75503 358 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 LY86O95711 162 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 MBPP02686 304 aaPredicted RBP12.63□□□□□ -0.39
IRF1-211ENST00000613424 SLC25A4P12235 298 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 EDN2P20800 178 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 RAB11AP62491 216 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 RPP30P78346 268 aaKnown RBP12.63□□□□□ -0.39
IRF1-211ENST00000613424 TM4SF20Q53R12 229 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 SPANXN5Q5MJ07 72 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 ETFRF1Q6IPR1 90 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 PRSS54Q6PEW0 395 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 GSG1LQ6UXU4 331 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 ADAMTSL5Q6ZMM2 481 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 PSENENQ9NZ42 101 aa12.63□□□□□ -0.39
IRF1-211ENST00000613424 ZMAT5Q9UDW3 170 aaKnown RBP12.63□□□□□ -0.39
IRF1-211ENST00000613424 PAIP2BQ9ULR5 123 aaKnown RBP12.63□□□□□ -0.39
IRF1-211ENST00000613424 IGLV1-51P01701 117 aa12.62□□□□□ -0.39
IRF1-211ENST00000613424 PAX9P55771 341 aa12.62□□□□□ -0.39
IRF1-211ENST00000613424 RELQ04864 619 aaPredicted RBP12.62□□□□□ -0.39
IRF1-211ENST00000613424 CD69Q07108 199 aa12.62□□□□□ -0.39
IRF1-211ENST00000613424 DCTN2Q13561 401 aaKnown RBP12.62□□□□□ -0.39
IRF1-211ENST00000613424 HAPLN4Q86UW8 402 aa12.62□□□□□ -0.39
IRF1-211ENST00000613424 TMEM116Q8NCL8 245 aa12.62□□□□□ -0.39
IRF1-211ENST00000613424 SMIM8Q96KF7 97 aa12.62□□□□□ -0.39
IRF1-211ENST00000613424 AURKAIP1Q9NWT8 199 aaPredicted RBP12.62□□□□□ -0.39
IRF1-211ENST00000613424 STRAPQ9Y3F4 350 aaKnown RBP12.62□□□□□ -0.39
IRF1-211ENST00000613424 TMEM213A2RRL7 107 aa12.61□□□□□ -0.39
IRF1-211ENST00000613424 A8MWP6 167 aa12.61□□□□□ -0.39
IRF1-211ENST00000613424 H3BP45 60 aa12.61□□□□□ -0.39
IRF1-211ENST00000613424 FOLR2P14207 255 aa12.61□□□□□ -0.39
IRF1-211ENST00000613424 GPX4P36969 197 aaPredicted RBP12.61□□□□□ -0.39
IRF1-211ENST00000613424 RND2P52198 227 aa12.61□□□□□ -0.39
IRF1-211ENST00000613424 IL15RAQ13261 267 aa12.61□□□□□ -0.39
IRF1-211ENST00000613424 SLC16A13Q7RTY0 426 aa12.61□□□□□ -0.39
IRF1-211ENST00000613424 TMEM190Q8WZ59 177 aa12.61□□□□□ -0.39
IRF1-211ENST00000613424 NPIPB3Q92617 1050 aa12.61□□□□□ -0.39
IRF1-211ENST00000613424 RCL1Q9Y2P8 373 aaKnown RBP12.61□□□□□ -0.39
IRF1-211ENST00000613424 UFC1Q9Y3C8 167 aa12.61□□□□□ -0.39
IRF1-211ENST00000613424 TRAV30A0A087WSZ9 112 aa12.6□□□□□ -0.39
IRF1-211ENST00000613424 GOSR2O14653 212 aa12.6□□□□□ -0.39
IRF1-211ENST00000613424 SIX6O95475 246 aa12.6□□□□□ -0.39
IRF1-211ENST00000613424 CBLN1P23435 193 aa12.6□□□□□ -0.39
IRF1-211ENST00000613424 ELLP55199 621 aaPredicted RBP12.6□□□□□ -0.39
IRF1-211ENST00000613424 CACNG8Q8WXS5 425 aa12.6□□□□□ -0.39
IRF1-211ENST00000613424 ACY3Q96HD9 319 aa12.6□□□□□ -0.39
IRF1-211ENST00000613424 RAB40CQ96S21 281 aa12.6□□□□□ -0.39
IRF1-211ENST00000613424 C20orf24Q9BUV8 137 aa12.6□□□□□ -0.39
IRF1-211ENST00000613424 LSM5Q9Y4Y9 91 aaKnown RBP12.6□□□□□ -0.39
IRF1-211ENST00000613424 IGHV3OR16-8A0A075B7F1 116 aa12.59□□□□□ -0.39
IRF1-211ENST00000613424 C7orf66A4D0T2 115 aa12.59□□□□□ -0.39
IRF1-211ENST00000613424 K7EMT4 169 aa12.59□□□□□ -0.39
IRF1-211ENST00000613424 K7EPK0 472 aa12.59□□□□□ -0.39
IRF1-211ENST00000613424 SSNA1O43805 119 aa12.59□□□□□ -0.39
IRF1-211ENST00000613424 YIF1AO95070 293 aa12.59□□□□□ -0.39
IRF1-211ENST00000613424 IGLC1P0CG04 106 aa12.59□□□□□ -0.39
IRF1-211ENST00000613424 TAS2R30P59541 319 aa12.59□□□□□ -0.39
IRF1-211ENST00000613424 GAMTQ14353 236 aa12.59□□□□□ -0.39
IRF1-211ENST00000613424 TIGITQ495A1 244 aa12.59□□□□□ -0.39
IRF1-211ENST00000613424 WI2-2373I1.2A0A1W2PRP0 233 aa12.58□□□□□ -0.4
IRF1-211ENST00000613424 PRSS46E5RG02 174 aa12.58□□□□□ -0.4
IRF1-211ENST00000613424 ZNF207O43670 478 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms