RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SPATA25Q9BR10 227 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 CHRDL1Q9BU40 450 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 TMEM231Q9H6L2 316 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 MLXQ9UH92 298 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 TRAV14DV4A0A0A6YYC5 116 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 A0A0G2JRQ6 117 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 OR4C46A6NHA9 309 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 IFNA10P01566 189 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 C8orf88P0DMB2 117 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 RNASE2P10153 161 aaKnown RBP9.31□□□□□ -0.92
CBWD3-208ENST00000612050 SLC25A4P12235 298 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 PAFAH1B2P68402 229 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 ADAMTSL5Q6ZMM2 481 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 ZNF600Q6ZNG1 722 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 LHFPL5Q8TAF8 219 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 RNASEH2CQ8TDP1 164 aaKnown RBP9.31□□□□□ -0.92
CBWD3-208ENST00000612050 TMEM230Q96A57 120 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 C7orf50Q9BRJ6 194 aaKnown RBP9.31□□□□□ -0.92
CBWD3-208ENST00000612050 SRRQ9GZT4 340 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 C19orf73Q9NVV2 129 aa9.31□□□□□ -0.92
CBWD3-208ENST00000612050 DNAH3Q8TD57 4116 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 A0A1B0GU03 582 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 ZNF785A8K8V0 405 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 MED6O75586 246 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 IGHV3-48P01763 117 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 NPY1RP25929 384 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 CMC4P56277 68 aaPredicted RBP9.3□□□□□ -0.92
CBWD3-208ENST00000612050 UBE2MP61081 183 aaKnown RBP9.3□□□□□ -0.92
CBWD3-208ENST00000612050 RPP30P78346 268 aaKnown RBP9.3□□□□□ -0.92
CBWD3-208ENST00000612050 PRR20EP86478 221 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 PRR20CP86479 221 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 PRR20DP86480 221 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 PRR20BP86481 221 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 PRR20AP86496 221 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 CNPY1Q3B7I2 92 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 AARDQ4LEZ3 155 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 TMEM116Q8NCL8 245 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 SRD5A3Q9H8P0 318 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 U3KQ87 197 aa9.3□□□□□ -0.92
CBWD3-208ENST00000612050 A0A1W2PS18 150 aa9.29□□□□□ -0.92
CBWD3-208ENST00000612050 TSPAN4O14817 238 aa9.29□□□□□ -0.92
CBWD3-208ENST00000612050 ZNF207O43670 478 aaKnown RBP9.29□□□□□ -0.92
CBWD3-208ENST00000612050 CLN5O75503 358 aa9.29□□□□□ -0.92
CBWD3-208ENST00000612050 NXPH3O95157 252 aa9.29□□□□□ -0.92
CBWD3-208ENST00000612050 CD7P09564 240 aa9.29□□□□□ -0.92
CBWD3-208ENST00000612050 EDN2P20800 178 aa9.29□□□□□ -0.92
CBWD3-208ENST00000612050 ADMP35318 185 aa9.29□□□□□ -0.92
CBWD3-208ENST00000612050 EIF2B2P49770 351 aaKnown RBP9.29□□□□□ -0.92
CBWD3-208ENST00000612050 ATP5IP56385 69 aaPredicted RBP9.29□□□□□ -0.92
CBWD3-208ENST00000612050 TNFRSF9Q07011 255 aa9.29□□□□□ -0.92
CBWD3-208ENST00000612050 C2orf83Q53S99 150 aa9.29□□□□□ -0.92
CBWD3-208ENST00000612050 Q6ZRM9 215 aa9.29□□□□□ -0.92
CBWD3-208ENST00000612050 LYZL2Q7Z4W2 148 aa9.29□□□□□ -0.92
CBWD3-208ENST00000612050 DTD1Q8TEA8 209 aa9.29□□□□□ -0.92
CBWD3-208ENST00000612050 TMED3Q9Y3Q3 217 aa9.29□□□□□ -0.92
CBWD3-208ENST00000612050 IGHV3OR16-8A0A075B7F1 116 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 IGHV7-4-1A0A0J9YVY3 117 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 F8W735 103 aaPredicted RBP9.28□□□□□ -0.92
CBWD3-208ENST00000612050 TMEM50AO95807 157 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 IFNA21P01568 189 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 IFNA4P05014 189 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 RAB11AP62491 216 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 SUPT4H1P63272 117 aaKnown RBP9.28□□□□□ -0.92
CBWD3-208ENST00000612050 C4orf48Q5BLP8 95 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 DEFB125Q8N687 156 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 OR4X1Q8NH49 305 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 COQ8AQ8NI60 647 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 GRAMD2BQ96HH9 432 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 OR10C1Q96KK4 312 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 METTL26Q96S19 204 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 TM2D3Q9BRN9 247 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 RHPN1-AS1Q9BWJ2 59 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 PRR13Q9NZ81 148 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 SMPXQ9UHP9 88 aa9.28□□□□□ -0.92
CBWD3-208ENST00000612050 PUS1Q9Y606 427 aaKnown RBP eCLIP9.28□□□□□ -0.92
CBWD3-208ENST00000612050 LINC00854A0A1B0GVQ3 168 aa9.27□□□□□ -0.93
CBWD3-208ENST00000612050 FAM90A26D6RGX4 464 aa9.27□□□□□ -0.93
CBWD3-208ENST00000612050 SFT2D2O95562 160 aa9.27□□□□□ -0.93
CBWD3-208ENST00000612050 SLC25A6P12236 298 aa9.27□□□□□ -0.93
CBWD3-208ENST00000612050 NPPCP23582 126 aa9.27□□□□□ -0.93
CBWD3-208ENST00000612050 RPL11P62913 178 aaKnown RBP9.27□□□□□ -0.93
CBWD3-208ENST00000612050 HAGHQ16775 308 aa9.27□□□□□ -0.93
CBWD3-208ENST00000612050 BSXQ3C1V8 233 aa9.27□□□□□ -0.93
CBWD3-208ENST00000612050 NMSQ5H8A3 153 aa9.27□□□□□ -0.93
CBWD3-208ENST00000612050 OR1S2Q8NGQ3 325 aa9.27□□□□□ -0.93
CBWD3-208ENST00000612050 Q8WTZ3 238 aa9.27□□□□□ -0.93
CBWD3-208ENST00000612050 CIB3Q96Q77 187 aaPredicted RBP9.27□□□□□ -0.93
CBWD3-208ENST00000612050 HSPB7Q9UBY9 170 aa9.27□□□□□ -0.93
CBWD3-208ENST00000612050 PFDN2Q9UHV9 154 aa9.27□□□□□ -0.93
CBWD3-208ENST00000612050 SELENOKQ9Y6D0 94 aa9.27□□□□□ -0.93
CBWD3-208ENST00000612050 LOC102724200A0A096LPH7 203 aaPredicted RBP9.26□□□□□ -0.93
CBWD3-208ENST00000612050 DNASE2O00115 360 aaPredicted RBP9.26□□□□□ -0.93
CBWD3-208ENST00000612050 WRBO00258 174 aa9.26□□□□□ -0.93
CBWD3-208ENST00000612050 NDUFB6O95139 128 aa9.26□□□□□ -0.93
CBWD3-208ENST00000612050 FABP1P07148 127 aa9.26□□□□□ -0.93
CBWD3-208ENST00000612050 APOC4P55056 127 aa9.26□□□□□ -0.93
CBWD3-208ENST00000612050 PPP1R1AQ13522 171 aa9.26□□□□□ -0.93
CBWD3-208ENST00000612050 C4orf46Q504U0 113 aa9.26□□□□□ -0.93
CBWD3-208ENST00000612050 PVRIGQ6DKI7 326 aa9.26□□□□□ -0.93
CBWD3-208ENST00000612050 TOMM20LQ6UXN7 152 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms