RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 SCGB3A2Q96PL1 93 aa19.37■□□□□ 0.69
PNKP-216ENST00000601816 MCUBQ9NWR8 336 aa19.37■□□□□ 0.69
PNKP-216ENST00000601816 CACNG5Q9UF02 275 aa19.37■□□□□ 0.69
PNKP-216ENST00000601816 BMI1P35226 326 aa19.36■□□□□ 0.69
PNKP-216ENST00000601816 OPRK1P41145 380 aa19.36■□□□□ 0.69
PNKP-216ENST00000601816 APOC4P55056 127 aa19.36■□□□□ 0.69
PNKP-216ENST00000601816 GPR146Q96CH1 333 aa19.36■□□□□ 0.69
PNKP-216ENST00000601816 TMEM50AO95807 157 aa19.35■□□□□ 0.69
PNKP-216ENST00000601816 BSXQ3C1V8 233 aa19.35■□□□□ 0.69
PNKP-216ENST00000601816 FNDC4Q9H6D8 234 aaPredicted RBP19.35■□□□□ 0.69
PNKP-216ENST00000601816 KCNIP3Q9Y2W7 256 aa19.35■□□□□ 0.69
PNKP-216ENST00000601816 PUS1Q9Y606 427 aaKnown RBP eCLIP19.35■□□□□ 0.69
PNKP-216ENST00000601816 TMEM56-RWDD3S4R434 201 aa19.35■□□□□ 0.69
PNKP-216ENST00000601816 IGHV3OR16-13A0A075B7E8 117 aa19.34■□□□□ 0.69
PNKP-216ENST00000601816 IGHV3-74A0A0B4J1X5 117 aa19.34■□□□□ 0.69
PNKP-216ENST00000601816 HTR2BP41595 481 aa19.34■□□□□ 0.69
PNKP-216ENST00000601816 TMEM230Q96A57 120 aa19.34■□□□□ 0.69
PNKP-216ENST00000601816 OVOL2Q9BRP0 275 aa19.34■□□□□ 0.69
PNKP-216ENST00000601816 HEYLQ9NQ87 328 aaPredicted RBP19.34■□□□□ 0.69
PNKP-216ENST00000601816 STARD9Q9P2P6 4700 aa19.33■□□□□ 0.69
PNKP-216ENST00000601816 IGKV3-7A0A075B6H7 116 aa19.33■□□□□ 0.68
PNKP-216ENST00000601816 SCGB2A1O75556 95 aa19.33■□□□□ 0.68
PNKP-216ENST00000601816 TFPI2P48307 235 aa19.33■□□□□ 0.68
PNKP-216ENST00000601816 OR4X1Q8NH49 305 aa19.33■□□□□ 0.68
PNKP-216ENST00000601816 IL22RA2Q969J5 263 aa19.33■□□□□ 0.68
PNKP-216ENST00000601816 GALNT14Q96FL9 552 aa19.33■□□□□ 0.68
PNKP-216ENST00000601816 ZFAND3Q9H8U3 227 aa19.33■□□□□ 0.68
PNKP-216ENST00000601816 MRPL36Q9P0J6 103 aaKnown RBP19.33■□□□□ 0.68
PNKP-216ENST00000601816 CCDC160A6NGH7 325 aa19.32■□□□□ 0.68
PNKP-216ENST00000601816 CEBPZOSA8MTT3 80 aa19.32■□□□□ 0.68
PNKP-216ENST00000601816 CLN5O75503 358 aa19.32■□□□□ 0.68
PNKP-216ENST00000601816 TMEM187Q14656 261 aa19.32■□□□□ 0.68
PNKP-216ENST00000601816 MLANAQ16655 118 aa19.32■□□□□ 0.68
PNKP-216ENST00000601816 FAM90A2PQ658T7 463 aa19.32■□□□□ 0.68
PNKP-216ENST00000601816 TCF24Q7RTU0 167 aa19.32■□□□□ 0.68
PNKP-216ENST00000601816 PRR13Q9NZ81 148 aa19.32■□□□□ 0.68
PNKP-216ENST00000601816 LCE6AA0A183 80 aa19.31■□□□□ 0.68
PNKP-216ENST00000601816 RPS10-NUDT3A0A1W2PQS6 291 aa19.31■□□□□ 0.68
PNKP-216ENST00000601816 CD5P06127 495 aa19.31■□□□□ 0.68
PNKP-216ENST00000601816 FAUP35544 74 aaKnown RBP19.31■□□□□ 0.68
PNKP-216ENST00000601816 CMC4P56277 68 aaPredicted RBP19.31■□□□□ 0.68
PNKP-216ENST00000601816 ST8SIA2Q92186 375 aa19.31■□□□□ 0.68
PNKP-216ENST00000601816 VSIRQ9H7M9 311 aa19.31■□□□□ 0.68
PNKP-216ENST00000601816 CACFD1Q9UGQ2 172 aa19.31■□□□□ 0.68
PNKP-216ENST00000601816 KIR2DL5BA0A0G2JN68 375 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 KIR2DL5BA0A0G2JPC4 375 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 A0A1B0GU03 582 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 UBE2CO00762 179 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 SULT1A3P0DMM9 295 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 SULT1A4P0DMN0 295 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 AKR1C4P17516 323 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 PAFAH1B2P68402 229 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 PYDC2Q56P42 97 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 Q6ZWC4 215 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 KIR2DL5AQ8N109 375 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 GBGT1Q8N5D6 347 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 SLC24A4Q8NFF2 622 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 KIR2DL5BQ8NHK3 375 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 TP53TG1Q9Y2A0 90 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 TENM2Q9NT68 2774 aa19.3■□□□□ 0.68
PNKP-216ENST00000601816 CSMD3Q7Z407 3707 aa19.29■□□□□ 0.68
PNKP-216ENST00000601816 APOHP02749 345 aaPredicted RBP19.29■□□□□ 0.68
PNKP-216ENST00000601816 RPL35AP18077 110 aaKnown RBP19.29■□□□□ 0.68
PNKP-216ENST00000601816 AP3S2P59780 193 aa19.29■□□□□ 0.68
PNKP-216ENST00000601816 C2orf83Q53S99 150 aa19.29■□□□□ 0.68
PNKP-216ENST00000601816 APRG1Q8IVJ8 170 aa19.29■□□□□ 0.68
PNKP-216ENST00000601816 STPG3Q8N7X2 389 aa19.29■□□□□ 0.68
PNKP-216ENST00000601816 TRIM63Q969Q1 353 aa19.29■□□□□ 0.68
PNKP-216ENST00000601816 TMEM231Q9H6L2 316 aa19.29■□□□□ 0.68
PNKP-216ENST00000601816 TRAV30A0A087WSZ9 112 aa19.28■□□□□ 0.68
PNKP-216ENST00000601816 IGHV3-66A0A0C4DH42 116 aa19.28■□□□□ 0.68
PNKP-216ENST00000601816 NXPH3O95157 252 aa19.28■□□□□ 0.68
PNKP-216ENST00000601816 KLF9Q13886 244 aaPredicted RBP19.28■□□□□ 0.68
PNKP-216ENST00000601816 DEFB135Q30KP9 77 aa19.28■□□□□ 0.68
PNKP-216ENST00000601816 RNASEH2CQ8TDP1 164 aaKnown RBP19.28■□□□□ 0.68
PNKP-216ENST00000601816 SACSQ9NZJ4 4579 aa19.28■□□□□ 0.68
PNKP-216ENST00000601816 A0A0B4J2A0 478 aa19.27■□□□□ 0.68
PNKP-216ENST00000601816 SPRY2O43597 315 aa19.27■□□□□ 0.68
PNKP-216ENST00000601816 ANXA3P12429 323 aa19.27■□□□□ 0.68
PNKP-216ENST00000601816 NPPCP23582 126 aa19.27■□□□□ 0.68
PNKP-216ENST00000601816 S100A5P33763 92 aa19.27■□□□□ 0.68
PNKP-216ENST00000601816 SUPT4H1P63272 117 aaKnown RBP19.27■□□□□ 0.68
PNKP-216ENST00000601816 SRPXP78539 464 aa19.27■□□□□ 0.68
PNKP-216ENST00000601816 METTL26Q96S19 204 aa19.27■□□□□ 0.68
PNKP-216ENST00000601816 MAP6D1Q9H9H5 199 aa19.27■□□□□ 0.68
PNKP-216ENST00000601816 SHPKQ9UHJ6 478 aa19.27■□□□□ 0.68
PNKP-216ENST00000601816 V9GYH0 126 aa19.27■□□□□ 0.68
PNKP-216ENST00000601816 IGKV1-17P01599 117 aa19.26■□□□□ 0.67
PNKP-216ENST00000601816 SLC25A4P12235 298 aa19.26■□□□□ 0.67
PNKP-216ENST00000601816 NPY1RP25929 384 aa19.26■□□□□ 0.67
PNKP-216ENST00000601816 CCR6P51684 374 aa19.26■□□□□ 0.67
PNKP-216ENST00000601816 RPL11P62913 178 aaKnown RBP19.26■□□□□ 0.67
PNKP-216ENST00000601816 TIGITQ495A1 244 aa19.26■□□□□ 0.67
PNKP-216ENST00000601816 NMSQ5H8A3 153 aa19.26■□□□□ 0.67
PNKP-216ENST00000601816 WFDC3Q8IUB2 231 aa19.26■□□□□ 0.67
PNKP-216ENST00000601816 LGI3Q8N145 548 aa19.26■□□□□ 0.67
PNKP-216ENST00000601816 LILRB2Q8N423 598 aa19.26■□□□□ 0.67
PNKP-216ENST00000601816 TOMM5Q8N4H5 51 aa19.26■□□□□ 0.67
PNKP-216ENST00000601816 RYR2Q92736 4967 aa19.25■□□□□ 0.67
PNKP-216ENST00000601816 A0A1W2PS18 150 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms