RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 FNDC4Q9H6D8 234 aaPredicted RBP16.78■□□□□ 0.28
SSBP4-209ENST00000601357 ZFAND3Q9H8U3 227 aa16.78■□□□□ 0.28
SSBP4-209ENST00000601357 TP53TG1Q9Y2A0 90 aa16.78■□□□□ 0.28
SSBP4-209ENST00000601357 HYDINQ4G0P3 5121 aa16.77■□□□□ 0.28
SSBP4-209ENST00000601357 KIR2DL5BA0A0G2JN68 375 aa16.77■□□□□ 0.28
SSBP4-209ENST00000601357 KIR2DL5BA0A0G2JPC4 375 aa16.77■□□□□ 0.28
SSBP4-209ENST00000601357 SPCS3P61009 180 aa16.77■□□□□ 0.28
SSBP4-209ENST00000601357 DHODHQ02127 395 aa16.77■□□□□ 0.28
SSBP4-209ENST00000601357 WFDC3Q8IUB2 231 aa16.77■□□□□ 0.28
SSBP4-209ENST00000601357 KIR2DL5AQ8N109 375 aa16.77■□□□□ 0.28
SSBP4-209ENST00000601357 KIR2DL5BQ8NHK3 375 aa16.77■□□□□ 0.28
SSBP4-209ENST00000601357 GINS3Q9BRX5 216 aa16.77■□□□□ 0.28
SSBP4-209ENST00000601357 C6orf62Q9GZU0 229 aaPredicted RBP16.77■□□□□ 0.28
SSBP4-209ENST00000601357 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.77■□□□□ 0.28
SSBP4-209ENST00000601357 MRPL36Q9P0J6 103 aaKnown RBP16.77■□□□□ 0.28
SSBP4-209ENST00000601357 RSL24D1Q9UHA3 163 aaKnown RBP16.77■□□□□ 0.28
SSBP4-209ENST00000601357 ZNF600Q6ZNG1 722 aa16.76■□□□□ 0.27
SSBP4-209ENST00000601357 VSIRQ9H7M9 311 aa16.76■□□□□ 0.27
SSBP4-209ENST00000601357 ENY2Q9NPA8 101 aa16.76■□□□□ 0.27
SSBP4-209ENST00000601357 PUS1Q9Y606 427 aaKnown RBP eCLIP16.76■□□□□ 0.27
SSBP4-209ENST00000601357 TMEM56-RWDD3S4R434 201 aa16.76■□□□□ 0.27
SSBP4-209ENST00000601357 A0A1B0GU03 582 aa16.75■□□□□ 0.27
SSBP4-209ENST00000601357 UBE2CO00762 179 aa16.75■□□□□ 0.27
SSBP4-209ENST00000601357 TNFSF8P32971 234 aa16.75■□□□□ 0.27
SSBP4-209ENST00000601357 MLANAQ16655 118 aa16.75■□□□□ 0.27
SSBP4-209ENST00000601357 GALNT14Q96FL9 552 aa16.75■□□□□ 0.27
SSBP4-209ENST00000601357 IGHV3OR16-13A0A075B7E8 117 aa16.74■□□□□ 0.27
SSBP4-209ENST00000601357 IGHV3-74A0A0B4J1X5 117 aa16.74■□□□□ 0.27
SSBP4-209ENST00000601357 CLN5O75503 358 aa16.74■□□□□ 0.27
SSBP4-209ENST00000601357 APOHP02749 345 aaPredicted RBP16.74■□□□□ 0.27
SSBP4-209ENST00000601357 TMEM268Q5VZI3 342 aa16.74■□□□□ 0.27
SSBP4-209ENST00000601357 LILRB2Q8N423 598 aa16.74■□□□□ 0.27
SSBP4-209ENST00000601357 OR4X1Q8NH49 305 aa16.74■□□□□ 0.27
SSBP4-209ENST00000601357 ST8SIA2Q92186 375 aa16.74■□□□□ 0.27
SSBP4-209ENST00000601357 TMEM230Q96A57 120 aa16.74■□□□□ 0.27
SSBP4-209ENST00000601357 GPR146Q96CH1 333 aa16.74■□□□□ 0.27
SSBP4-209ENST00000601357 MAP6D1Q9H9H5 199 aa16.74■□□□□ 0.27
SSBP4-209ENST00000601357 CACNG5Q9UF02 275 aa16.74■□□□□ 0.27
SSBP4-209ENST00000601357 SPRY2O43597 315 aa16.73■□□□□ 0.27
SSBP4-209ENST00000601357 NOL3O60936 208 aaKnown RBP16.73■□□□□ 0.27
SSBP4-209ENST00000601357 CD5P06127 495 aa16.73■□□□□ 0.27
SSBP4-209ENST00000601357 OPRK1P41145 380 aa16.73■□□□□ 0.27
SSBP4-209ENST00000601357 HTR2BP41595 481 aa16.73■□□□□ 0.27
SSBP4-209ENST00000601357 DEFB135Q30KP9 77 aa16.73■□□□□ 0.27
SSBP4-209ENST00000601357 APRG1Q8IVJ8 170 aa16.73■□□□□ 0.27
SSBP4-209ENST00000601357 IL22RA2Q969J5 263 aa16.73■□□□□ 0.27
SSBP4-209ENST00000601357 BMI1P35226 326 aa16.72■□□□□ 0.27
SSBP4-209ENST00000601357 TFPI2P48307 235 aa16.72■□□□□ 0.27
SSBP4-209ENST00000601357 CMC4P56277 68 aaPredicted RBP16.72■□□□□ 0.27
SSBP4-209ENST00000601357 TMEM187Q14656 261 aa16.72■□□□□ 0.27
SSBP4-209ENST00000601357 TCF24Q7RTU0 167 aa16.72■□□□□ 0.27
SSBP4-209ENST00000601357 STPG3Q8N7X2 389 aa16.72■□□□□ 0.27
SSBP4-209ENST00000601357 MCFD2Q8NI22 146 aa16.72■□□□□ 0.27
SSBP4-209ENST00000601357 RNF183Q96D59 192 aa16.72■□□□□ 0.27
SSBP4-209ENST00000601357 SCP2D1Q9UJQ7 156 aa16.72■□□□□ 0.27
SSBP4-209ENST00000601357 IGKV3-7A0A075B6H7 116 aa16.71■□□□□ 0.27
SSBP4-209ENST00000601357 FABP12A6NFH5 140 aa16.71■□□□□ 0.27
SSBP4-209ENST00000601357 IGKV1-17P01599 117 aa16.71■□□□□ 0.27
SSBP4-209ENST00000601357 TNFRSF9Q07011 255 aa16.71■□□□□ 0.27
SSBP4-209ENST00000601357 ZNF124Q15973 351 aa16.71■□□□□ 0.27
SSBP4-209ENST00000601357 C2orf83Q53S99 150 aa16.71■□□□□ 0.27
SSBP4-209ENST00000601357 GBGT1Q8N5D6 347 aa16.71■□□□□ 0.27
SSBP4-209ENST00000601357 HEYLQ9NQ87 328 aaPredicted RBP16.71■□□□□ 0.27
SSBP4-209ENST00000601357 RPL35AP18077 110 aaKnown RBP16.7■□□□□ 0.26
SSBP4-209ENST00000601357 SUPT4H1P63272 117 aaKnown RBP16.7■□□□□ 0.26
SSBP4-209ENST00000601357 NMSQ5H8A3 153 aa16.7■□□□□ 0.26
SSBP4-209ENST00000601357 TMEM170AQ8WVE7 144 aa16.7■□□□□ 0.26
SSBP4-209ENST00000601357 PRR13Q9NZ81 148 aa16.7■□□□□ 0.26
SSBP4-209ENST00000601357 PLECQ15149 4684 aaKnown RBP16.7■□□□□ 0.26
SSBP4-209ENST00000601357 TRAV2A0A0B4J234 112 aa16.69■□□□□ 0.26
SSBP4-209ENST00000601357 DFFBO76075 338 aa16.69■□□□□ 0.26
SSBP4-209ENST00000601357 CRYBB3P26998 211 aa16.69■□□□□ 0.26
SSBP4-209ENST00000601357 PAFAH1B2P68402 229 aa16.69■□□□□ 0.26
SSBP4-209ENST00000601357 RNASEH2CQ8TDP1 164 aaKnown RBP16.69■□□□□ 0.26
SSBP4-209ENST00000601357 SCGB3A2Q96PL1 93 aa16.69■□□□□ 0.26
SSBP4-209ENST00000601357 MS4A6AQ9H2W1 248 aa16.69■□□□□ 0.26
SSBP4-209ENST00000601357 CACFD1Q9UGQ2 172 aa16.69■□□□□ 0.26
SSBP4-209ENST00000601357 KCNIP3Q9Y2W7 256 aa16.69■□□□□ 0.26
SSBP4-209ENST00000601357 TRAV30A0A087WSZ9 112 aa16.68■□□□□ 0.26
SSBP4-209ENST00000601357 IGHV3-66A0A0C4DH42 116 aa16.68■□□□□ 0.26
SSBP4-209ENST00000601357 A0A0J9YWU9 116 aa16.68■□□□□ 0.26
SSBP4-209ENST00000601357 RPS10-NUDT3A0A1W2PQS6 291 aa16.68■□□□□ 0.26
SSBP4-209ENST00000601357 NPPCP23582 126 aa16.68■□□□□ 0.26
SSBP4-209ENST00000601357 EWSR1Q01844 656 aaKnown RBP eCLIP16.68■□□□□ 0.264e-7■■■■□ 23.8
SSBP4-209ENST00000601357 PRSS54Q6PEW0 395 aa16.68■□□□□ 0.26
SSBP4-209ENST00000601357 LYG2Q86SG7 212 aa16.68■□□□□ 0.26
SSBP4-209ENST00000601357 SLC24A4Q8NFF2 622 aa16.68■□□□□ 0.26
SSBP4-209ENST00000601357 TRIM63Q969Q1 353 aa16.68■□□□□ 0.26
SSBP4-209ENST00000601357 MCUBQ9NWR8 336 aa16.68■□□□□ 0.26
SSBP4-209ENST00000601357 SCGB2A1O75556 95 aa16.67■□□□□ 0.26
SSBP4-209ENST00000601357 IGLC1P0CG04 106 aa16.67■□□□□ 0.26
SSBP4-209ENST00000601357 SULT1A3P0DMM9 295 aa16.67■□□□□ 0.26
SSBP4-209ENST00000601357 SULT1A4P0DMN0 295 aa16.67■□□□□ 0.26
SSBP4-209ENST00000601357 KLF9Q13886 244 aaPredicted RBP16.67■□□□□ 0.26
SSBP4-209ENST00000601357 TIGITQ495A1 244 aa16.67■□□□□ 0.26
SSBP4-209ENST00000601357 TMEM231Q9H6L2 316 aa16.67■□□□□ 0.26
SSBP4-209ENST00000601357 V9GYH0 126 aa16.67■□□□□ 0.26
SSBP4-209ENST00000601357 A0A0B4J2A0 478 aa16.66■□□□□ 0.26
SSBP4-209ENST00000601357 CEBPZOSA8MTT3 80 aa16.66■□□□□ 0.26
SSBP4-209ENST00000601357 JTBO76095 146 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms