RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 BAXQ07812 192 aa9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 LRRC37A5PQ49AS3 106 aa9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 KPRPQ5T749 579 aaPredicted RBP9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 ZNF343Q6P1L6 599 aa9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 ETV3LQ6ZN32 361 aa9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 TMEM252Q8N6L7 170 aa9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 TMEM116Q8NCL8 245 aa9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 C4orf3Q8WVX3 66 aa9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 EEF1AKMT3Q96AZ1 226 aa9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 MS4A10Q96PG2 267 aa9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 SLC25A31Q9H0C2 315 aa9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 RANGRFQ9HD47 186 aaPredicted RBP9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 GAR1Q9NY12 217 aaKnown RBP9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 MBD2Q9UBB5 411 aa9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 DYNC2H1Q8NCM8 4307 aaKnown RBP9.01□□□□□ -0.97
CHMP2A-207ENST00000600804 hCG_2014768A0A024R1R8 64 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 TCRBV4S1A1TA0A5B7 111 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 ADARB2-AS1A8MUL3 147 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 H3BP45 60 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 I3L521 148 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 MT-CO2P00403 227 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 SULT1A1P50225 295 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 CAV2P51636 162 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 CD69Q07108 199 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 Q5BKY6 102 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 SAMD5Q5TGI4 173 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 AKAP14Q86UN6 197 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 STX12Q86Y82 276 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 OR10P1Q8NGE3 313 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 OR4X1Q8NH49 305 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 ZNF502Q8TBZ5 544 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 SCARB1Q8WTV0 552 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 MISP3Q96FF7 219 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 CITED2Q99967 270 aaPredicted RBP9□□□□□ -0.97
CHMP2A-207ENST00000600804 FNDC4Q9H6D8 234 aaPredicted RBP9□□□□□ -0.97
CHMP2A-207ENST00000600804 C21orf62Q9NYP8 219 aa9□□□□□ -0.97
CHMP2A-207ENST00000600804 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.99□□□□□ -0.97
CHMP2A-207ENST00000600804 MFSD2BA6NFX1 497 aa8.99□□□□□ -0.97
CHMP2A-207ENST00000600804 FAM24AA6NFZ4 105 aa8.99□□□□□ -0.97
CHMP2A-207ENST00000600804 HMSDA8MTL9 139 aa8.99□□□□□ -0.97
CHMP2A-207ENST00000600804 LGALS1P09382 135 aaKnown RBP8.99□□□□□ -0.97
CHMP2A-207ENST00000600804 METTL15P1P0C7V9 234 aa8.99□□□□□ -0.97
CHMP2A-207ENST00000600804 OPRK1P41145 380 aa8.99□□□□□ -0.97
CHMP2A-207ENST00000600804 MFAP4P55083 255 aa8.99□□□□□ -0.97
CHMP2A-207ENST00000600804 DLK1P80370 383 aa8.99□□□□□ -0.97
CHMP2A-207ENST00000600804 LCNL1Q6ZST4 164 aa8.99□□□□□ -0.97
CHMP2A-207ENST00000600804 PINX1Q96BK5 328 aaKnown RBP8.99□□□□□ -0.97
CHMP2A-207ENST00000600804 AQP10Q96PS8 301 aa8.99□□□□□ -0.97
CHMP2A-207ENST00000600804 IGSF23A1L1A6 192 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 F8W735 103 aaPredicted RBP8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 RPL12P30050 165 aaKnown RBP8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 S100A11P31949 105 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 NPBWR1P48145 328 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 HBG1P69891 147 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 HBG2P69892 147 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 ATP6V1FQ16864 119 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 SPSB3Q6PJ21 355 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 SLC16A13Q7RTY0 426 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 HAPLN4Q86UW8 402 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 DCUN1D4Q92564 292 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 BSCL2Q96G97 398 aaPredicted RBP8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 CCDC140Q96MF4 163 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 NEURL2Q9BR09 285 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 GNB4Q9HAV0 340 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 TNFSF18Q9UNG2 199 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 SACSQ9NZJ4 4579 aa8.98□□□□□ -0.97
CHMP2A-207ENST00000600804 TRAV30A0A087WSZ9 112 aa8.97□□□□□ -0.97
CHMP2A-207ENST00000600804 CLN5O75503 358 aa8.97□□□□□ -0.97
CHMP2A-207ENST00000600804 C1QBP02746 253 aa8.97□□□□□ -0.97
CHMP2A-207ENST00000600804 EWSR1Q01844 656 aaKnown RBP eCLIP8.97□□□□□ -0.97
CHMP2A-207ENST00000600804 ARL16Q0P5N6 197 aa8.97□□□□□ -0.97
CHMP2A-207ENST00000600804 FHL3Q13643 280 aa8.97□□□□□ -0.97
CHMP2A-207ENST00000600804 GAMTQ14353 236 aa8.97□□□□□ -0.97
CHMP2A-207ENST00000600804 VWC2Q2TAL6 325 aa8.97□□□□□ -0.97
CHMP2A-207ENST00000600804 ACOT7LQ6ZUV0 252 aa8.97□□□□□ -0.97
CHMP2A-207ENST00000600804 ZNF546Q86UE3 836 aa8.97□□□□□ -0.97
CHMP2A-207ENST00000600804 THAP8Q8NA92 274 aa8.97□□□□□ -0.97
CHMP2A-207ENST00000600804 SLC35E1Q96K37 410 aa8.97□□□□□ -0.97
CHMP2A-207ENST00000600804 PEF1Q9UBV8 284 aaKnown RBP8.97□□□□□ -0.97
CHMP2A-207ENST00000600804 HSPB11Q9Y547 144 aa8.97□□□□□ -0.97
CHMP2A-207ENST00000600804 SCGB2A1O75556 95 aa8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 CST7O76096 145 aa8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 HSPB1P04792 205 aaKnown RBP8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 NUP62P37198 522 aaPredicted RBP8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 SLC38A11Q08AI6 406 aa8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 ZNF345Q14585 488 aa8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 MLANAQ16655 118 aa8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 OR8G2PQ6IF36 304 aa8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 ACSM6Q6P461 480 aa8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 TMEM144Q7Z5S9 345 aa8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 C11orf44Q8N8P7 122 aa8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 INO80EQ8NBZ0 244 aaPredicted RBP8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 KLHL30-AS1Q8NEE0 82 aa8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 NPVFQ9HCQ7 196 aa8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 MRPL36Q9P0J6 103 aaKnown RBP8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 PAIP2BQ9ULR5 123 aaKnown RBP8.96□□□□□ -0.98
CHMP2A-207ENST00000600804 FXYD6-FXYD2A0A087WZ82 144 aa8.95□□□□□ -0.98
CHMP2A-207ENST00000600804 RNF222A6NCQ9 220 aa8.95□□□□□ -0.98
CHMP2A-207ENST00000600804 TGOLN2O43493 480 aa8.95□□□□□ -0.98
CHMP2A-207ENST00000600804 IGHV3-11P01762 117 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms