RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 GNB1LQ9BYB4 327 aa16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 DNAJC4Q9NNZ3 241 aa16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 OSTCQ9NRP0 149 aa16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 NAT8BQ9UHF3 227 aa16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 PPIAL4EA0A075B759 164 aa16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 PPIAL4DF5H284 164 aa16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 PPIAL4FP0DN26 164 aa16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 PYYP10082 97 aa16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 PPOXP50336 477 aa16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 OR4C13Q8NGP0 309 aa16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 HSPB9Q9BQS6 159 aa16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 PPIAL4AQ9Y536 164 aa16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 TMEM178BH3BS89 294 aa16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 THBDP07204 575 aa16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 ESDP10768 282 aa16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 PAFAH1B2P68402 229 aa16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 KIAA1644Q3SXP7 199 aa16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 IBA57Q5T440 356 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 MRPL32Q9BYC8 188 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-225ENST00000600733 ZFHX2Q9C0A1 2572 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 KIR2DL5BA0A0G2JN68 375 aa16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 KIR2DL5BA0A0G2JPC4 375 aa16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 CA1P00915 261 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 CDKN1AP38936 164 aa16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 TDRG1Q3Y452 100 aa16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 TOMM20LQ6UXN7 152 aa16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 KIR2DL5AQ8N109 375 aa16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 TMEM167AQ8TBQ9 72 aa16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 NPIPB3Q92617 1050 aa16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 ZNF430Q9H8G1 570 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 GNB4Q9HAV0 340 aa16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 SERTAD4Q9NUC0 356 aa16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 TRBV9A0A0B4J1U6 114 aa16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 ISLRO14498 428 aa16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 RANP62826 216 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 TPSG1Q9NRR2 321 aa16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 ZNF355PQ9NSJ1 428 aa16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 MRPL36Q9P0J6 103 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-225ENST00000600733 COX7A2P2O60397 106 aa16.33■□□□□ 0.2
SHKBP1-225ENST00000600733 IGLV2-23P01705 113 aa16.33■□□□□ 0.2
SHKBP1-225ENST00000600733 REG1AP05451 166 aa16.33■□□□□ 0.2
SHKBP1-225ENST00000600733 Q0VG73 95 aa16.33■□□□□ 0.2
SHKBP1-225ENST00000600733 MRPL54Q6P161 138 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-225ENST00000600733 TMEM136Q6ZRR5 245 aa16.33■□□□□ 0.2
SHKBP1-225ENST00000600733 RITA1Q96K30 269 aa16.33■□□□□ 0.2
SHKBP1-225ENST00000600733 SAMD10Q9BYL1 202 aa16.33■□□□□ 0.2
SHKBP1-225ENST00000600733 A0A1W2PN81 502 aa16.33■□□□□ 0.2
SHKBP1-225ENST00000600733 TPTE2P1Q5T6R2 138 aa16.33■□□□□ 0.2
SHKBP1-225ENST00000600733 PATE2Q6UY27 113 aa16.33■□□□□ 0.2
SHKBP1-225ENST00000600733 CTSZQ9UBR2 303 aa16.33■□□□□ 0.2
SHKBP1-225ENST00000600733 INS-IGF2F8WCM5 200 aa16.32■□□□□ 0.2
SHKBP1-225ENST00000600733 SSTP61278 116 aa16.32■□□□□ 0.2
SHKBP1-225ENST00000600733 PDPNQ86YL7 162 aa16.32■□□□□ 0.2
SHKBP1-225ENST00000600733 TGIF2LXQ8IUE1 241 aa16.32■□□□□ 0.2
SHKBP1-225ENST00000600733 SNHG12Q9BXW3 62 aa16.32■□□□□ 0.2
SHKBP1-225ENST00000600733 IGKV1D-37A0A075B6S9 117 aa16.31■□□□□ 0.2
SHKBP1-225ENST00000600733 NDUFB3O43676 98 aa16.31■□□□□ 0.2
SHKBP1-225ENST00000600733 SLC25A17O43808 307 aa16.31■□□□□ 0.2
SHKBP1-225ENST00000600733 C10orf113Q5VZT2 155 aa16.31■□□□□ 0.2
SHKBP1-225ENST00000600733 VSTM2AQ8TAG5 236 aa16.31■□□□□ 0.2
SHKBP1-225ENST00000600733 FAM168AQ92567 244 aa16.31■□□□□ 0.2
SHKBP1-225ENST00000600733 ST6GALNAC6Q969X2 333 aa16.31■□□□□ 0.2
SHKBP1-225ENST00000600733 PRRG2O14669 202 aa16.31■□□□□ 0.2
SHKBP1-225ENST00000600733 PLAUP00749 431 aa16.31■□□□□ 0.2
SHKBP1-225ENST00000600733 LRRC10Q5BKY1 277 aa16.31■□□□□ 0.2
SHKBP1-225ENST00000600733 PAXXQ9BUH6 204 aa16.31■□□□□ 0.2
SHKBP1-225ENST00000600733 SSBP3Q9BWW4 388 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-225ENST00000600733 WASHC3Q9Y3C0 194 aa16.31■□□□□ 0.2
SHKBP1-225ENST00000600733 RNF114Q9Y508 228 aa16.31■□□□□ 0.2
SHKBP1-225ENST00000600733 SMIM27A0A1W2PRY6 76 aa16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 RUSC1-AS1Q66K80 236 aa16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 WDR73Q6P4I2 378 aa16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 TMEM186Q96B77 213 aa16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 RNF2Q99496 336 aa16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 FAM103A1Q9BTL3 118 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 CDC42EP3Q9UKI2 254 aa16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 AMMECR1Q9Y4X0 333 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 SPTBN2O15020 2390 aa16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 IGHV3-72A0A0B4J1Y9 119 aa16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 TRAV34A0A0B4J273 112 aa16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 TCRBV4S1A1TA0A5B7 111 aa16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 MT-ND6P03923 174 aa16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 LOXP28300 417 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 OR4A5Q8NH83 315 aa16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 RCHY1Q96PM5 261 aa16.3■□□□□ 0.2
SHKBP1-225ENST00000600733 A0A1W2PPI3 338 aa16.29■□□□□ 0.2
SHKBP1-225ENST00000600733 TNFRSF13BO14836 293 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-225ENST00000600733 VN1R17PQ8TDU5 208 aa16.29■□□□□ 0.2
SHKBP1-225ENST00000600733 RPL19P84098 196 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-225ENST00000600733 LHFPL4Q7Z7J7 247 aa16.29■□□□□ 0.2
SHKBP1-225ENST00000600733 ZNF329Q86UD4 541 aa16.29■□□□□ 0.2
SHKBP1-225ENST00000600733 ATG101Q9BSB4 218 aa16.29■□□□□ 0.2
SHKBP1-225ENST00000600733 FSTL3O95633 263 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 AMY1AP04745 511 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 TDGF1P3P51864 188 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 SUB1P53999 127 aaKnown RBP eCLIP16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 TEX43Q6ZNM6 134 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 OR1L4Q8NGR5 311 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 ZNF596Q8TC21 504 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 TACC2O95359 2948 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms