RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 APOC4P55056 127 aa13.31□□□□□ -0.28
CHMP2A-203ENST00000597209 FAM90A2PQ658T7 463 aa13.31□□□□□ -0.28
CHMP2A-203ENST00000597209 TOMM20LQ6UXN7 152 aa13.31□□□□□ -0.28
CHMP2A-203ENST00000597209 ZNF600Q6ZNG1 722 aa13.31□□□□□ -0.28
CHMP2A-203ENST00000597209 Q6ZWC4 215 aa13.31□□□□□ -0.28
CHMP2A-203ENST00000597209 WFDC3Q8IUB2 231 aa13.31□□□□□ -0.28
CHMP2A-203ENST00000597209 TP53TG1Q9Y2A0 90 aa13.31□□□□□ -0.28
CHMP2A-203ENST00000597209 TMEM56-RWDD3S4R434 201 aa13.31□□□□□ -0.28
CHMP2A-203ENST00000597209 KIR2DL5BA0A0G2JN68 375 aa13.3□□□□□ -0.28
CHMP2A-203ENST00000597209 KIR2DL5BA0A0G2JPC4 375 aa13.3□□□□□ -0.28
CHMP2A-203ENST00000597209 KIR2DL5AQ8N109 375 aa13.3□□□□□ -0.28
CHMP2A-203ENST00000597209 OR51S1Q8NGJ8 323 aa13.3□□□□□ -0.28
CHMP2A-203ENST00000597209 KIR2DL5BQ8NHK3 375 aa13.3□□□□□ -0.28
CHMP2A-203ENST00000597209 IL22RA2Q969J5 263 aa13.3□□□□□ -0.28
CHMP2A-203ENST00000597209 SCGB3A2Q96PL1 93 aa13.3□□□□□ -0.28
CHMP2A-203ENST00000597209 VSIRQ9H7M9 311 aa13.3□□□□□ -0.28
CHMP2A-203ENST00000597209 CACFD1Q9UGQ2 172 aa13.3□□□□□ -0.28
CHMP2A-203ENST00000597209 SCP2D1Q9UJQ7 156 aa13.3□□□□□ -0.28
CHMP2A-203ENST00000597209 FABP12A6NFH5 140 aa13.29□□□□□ -0.28
CHMP2A-203ENST00000597209 CLN5O75503 358 aa13.29□□□□□ -0.28
CHMP2A-203ENST00000597209 TNFSF8P32971 234 aa13.29□□□□□ -0.28
CHMP2A-203ENST00000597209 HTR2BP41595 481 aa13.29□□□□□ -0.28
CHMP2A-203ENST00000597209 OR4X1Q8NH49 305 aa13.29□□□□□ -0.28
CHMP2A-203ENST00000597209 GPR146Q96CH1 333 aa13.29□□□□□ -0.28
CHMP2A-203ENST00000597209 GALNT14Q96FL9 552 aa13.29□□□□□ -0.28
CHMP2A-203ENST00000597209 FNDC4Q9H6D8 234 aaPredicted RBP13.29□□□□□ -0.28
CHMP2A-203ENST00000597209 ZFAND3Q9H8U3 227 aa13.29□□□□□ -0.28
CHMP2A-203ENST00000597209 KCNIP3Q9Y2W7 256 aa13.29□□□□□ -0.28
CHMP2A-203ENST00000597209 STARD9Q9P2P6 4700 aa13.29□□□□□ -0.28
CHMP2A-203ENST00000597209 TENM2Q9NT68 2774 aa13.28□□□□□ -0.28
CHMP2A-203ENST00000597209 TMEM268Q5VZI3 342 aa13.28□□□□□ -0.28
CHMP2A-203ENST00000597209 MCFD2Q8NI22 146 aa13.28□□□□□ -0.28
CHMP2A-203ENST00000597209 CACNG5Q9UF02 275 aa13.28□□□□□ -0.28
CHMP2A-203ENST00000597209 PUS1Q9Y606 427 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHMP2A-203ENST00000597209 IGHV3-49A0A0A0MS15 119 aa13.27□□□□□ -0.29
CHMP2A-203ENST00000597209 SCGB2A1O75556 95 aa13.27□□□□□ -0.29
CHMP2A-203ENST00000597209 OPRK1P41145 380 aa13.27□□□□□ -0.29
CHMP2A-203ENST00000597209 PAFAH1B2P68402 229 aa13.27□□□□□ -0.29
CHMP2A-203ENST00000597209 TMEM187Q14656 261 aa13.27□□□□□ -0.29
CHMP2A-203ENST00000597209 C2orf83Q53S99 150 aa13.27□□□□□ -0.29
CHMP2A-203ENST00000597209 TMEM230Q96A57 120 aa13.27□□□□□ -0.29
CHMP2A-203ENST00000597209 TRAV30A0A087WSZ9 112 aa13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 TRAV2A0A0B4J234 112 aa13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 A0A1B0GU03 582 aa13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 RPS10-NUDT3A0A1W2PQS6 291 aa13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 SPRY2O43597 315 aa13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 MLANAQ16655 118 aa13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 TCF24Q7RTU0 167 aa13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 STPG3Q8N7X2 389 aa13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 RNASEH2CQ8TDP1 164 aaKnown RBP13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 ST8SIA2Q92186 375 aa13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 TMEM231Q9H6L2 316 aa13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 MAP6D1Q9H9H5 199 aa13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 HEYLQ9NQ87 328 aaPredicted RBP13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 MRPL36Q9P0J6 103 aaKnown RBP13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 RYR2Q92736 4967 aa13.26□□□□□ -0.29
CHMP2A-203ENST00000597209 IGHV3OR16-13A0A075B7E8 117 aa13.25□□□□□ -0.29
CHMP2A-203ENST00000597209 IGHV3-74A0A0B4J1X5 117 aa13.25□□□□□ -0.29
CHMP2A-203ENST00000597209 APOHP02749 345 aaPredicted RBP13.25□□□□□ -0.29
CHMP2A-203ENST00000597209 NPPCP23582 126 aa13.25□□□□□ -0.29
CHMP2A-203ENST00000597209 RNF183Q96D59 192 aa13.25□□□□□ -0.29
CHMP2A-203ENST00000597209 SACSQ9NZJ4 4579 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 A0A0B4J2A0 478 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 A0A1W2PS18 150 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 CEBPZOSA8MTT3 80 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 SULT1A3P0DMM9 295 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 SULT1A4P0DMN0 295 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 SLC25A4P12235 298 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 FAUP35544 74 aaKnown RBP13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 TNFRSF9Q07011 255 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 NMSQ5H8A3 153 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 NOXA1Q86UR1 476 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 APRG1Q8IVJ8 170 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 LILRB2Q8N423 598 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 SLC24A4Q8NFF2 622 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 MCUBQ9NWR8 336 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 SHPKQ9UHJ6 478 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 LYSTQ99698 3801 aa13.24□□□□□ -0.29
CHMP2A-203ENST00000597209 PIGBOS1A0A0B4J2F0 54 aa13.23□□□□□ -0.29
CHMP2A-203ENST00000597209 DFFBO76075 338 aa13.23□□□□□ -0.29
CHMP2A-203ENST00000597209 IGKV1-17P01599 117 aa13.23□□□□□ -0.29
CHMP2A-203ENST00000597209 RPL35AP18077 110 aaKnown RBP13.23□□□□□ -0.29
CHMP2A-203ENST00000597209 ATF4P18848 351 aaPredicted RBP13.23□□□□□ -0.29
CHMP2A-203ENST00000597209 CRYBB3P26998 211 aa13.23□□□□□ -0.29
CHMP2A-203ENST00000597209 TFPI2P48307 235 aa13.23□□□□□ -0.29
CHMP2A-203ENST00000597209 CCR6P51684 374 aa13.23□□□□□ -0.29
CHMP2A-203ENST00000597209 SUPT4H1P63272 117 aaKnown RBP13.23□□□□□ -0.29
CHMP2A-203ENST00000597209 KLF9Q13886 244 aaPredicted RBP13.23□□□□□ -0.29
CHMP2A-203ENST00000597209 DEFB135Q30KP9 77 aa13.23□□□□□ -0.29
CHMP2A-203ENST00000597209 ETFRF1Q6IPR1 90 aa13.23□□□□□ -0.29
CHMP2A-203ENST00000597209 DEDD2Q8WXF8 326 aa13.23□□□□□ -0.29
CHMP2A-203ENST00000597209 IGKV3-7A0A075B6H7 116 aa13.22□□□□□ -0.29
CHMP2A-203ENST00000597209 ANXA3P12429 323 aa13.22□□□□□ -0.29
CHMP2A-203ENST00000597209 AKR1C4P17516 323 aa13.22□□□□□ -0.29
CHMP2A-203ENST00000597209 AP3S2P59780 193 aa13.22□□□□□ -0.29
CHMP2A-203ENST00000597209 SRPXP78539 464 aa13.22□□□□□ -0.29
CHMP2A-203ENST00000597209 PRSS54Q6PEW0 395 aa13.22□□□□□ -0.29
CHMP2A-203ENST00000597209 LGI3Q8N145 548 aa13.22□□□□□ -0.29
CHMP2A-203ENST00000597209 GBGT1Q8N5D6 347 aa13.22□□□□□ -0.29
CHMP2A-203ENST00000597209 OR1S2Q8NGQ3 325 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms