RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 DYNLRB2Q8TF09 96 aa7.81□□□□□ -1.16
LIG1-213ENST00000596672 TMEM230Q96A57 120 aa7.81□□□□□ -1.16
LIG1-213ENST00000596672 HYLS1Q96M11 299 aa7.81□□□□□ -1.16
LIG1-213ENST00000596672 SRSF8Q9BRL6 282 aaKnown RBP7.81□□□□□ -1.16
LIG1-213ENST00000596672 HINT2Q9BX68 163 aa7.81□□□□□ -1.16
LIG1-213ENST00000596672 TUBA4BQ9H853 241 aa7.81□□□□□ -1.16
LIG1-213ENST00000596672 TECRQ9NZ01 308 aaKnown RBP7.81□□□□□ -1.16
LIG1-213ENST00000596672 OR51B2Q9Y5P1 312 aa7.81□□□□□ -1.16
LIG1-213ENST00000596672 F11RQ9Y624 299 aaKnown RBP7.81□□□□□ -1.16
LIG1-213ENST00000596672 TRBV7-1A0A0A6YYK4 115 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 LCE6AA0A183 80 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 C15orf61A6NNL5 157 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 I3L2K1 104 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 ZNF207O43670 478 aaKnown RBP7.8□□□□□ -1.16
LIG1-213ENST00000596672 CTSGP08311 255 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 SULT1A3P0DMM9 295 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 SULT1A4P0DMN0 295 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 CXCL3P19876 107 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 UCP3P55916 312 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 SPINK9Q5DT21 86 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 SLC25A24Q6NUK1 477 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 GTSCR1Q86UQ5 136 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 VN1R17PQ8TDU5 208 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 TMEM190Q8WZ59 177 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 TP53RKQ96S44 253 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 PRR13Q9NZ81 148 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 MRPL36Q9P0J6 103 aaKnown RBP7.8□□□□□ -1.16
LIG1-213ENST00000596672 MGAT4CQ9UBM8 478 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 FRAS1Q86XX4 4008 aa7.8□□□□□ -1.16
LIG1-213ENST00000596672 TEX13DA0A0J9YY54 714 aaPredicted RBP7.79□□□□□ -1.16
LIG1-213ENST00000596672 SMLR1H3BR10 107 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 GOSR2O14653 212 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 SIX6O95475 246 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 SFT2D2O95562 160 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 PIGPP57054 158 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 DHODHQ02127 395 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 FAM106AQ4KMX7 169 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 TMEM128Q5BJH2 165 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 LPCAT3Q6P1A2 487 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 SLC38A6Q8IZM9 456 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 LILRB2Q8N423 598 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 OR2C3Q8N628 320 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 LSM10Q969L4 123 aaKnown RBP7.79□□□□□ -1.16
LIG1-213ENST00000596672 CXorf58Q96LI9 332 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 OVOL2Q9BRP0 275 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 AIFM2Q9BRQ8 373 aa7.79□□□□□ -1.16
LIG1-213ENST00000596672 C4BPBP20851 252 aa7.78□□□□□ -1.16
LIG1-213ENST00000596672 SUPT4H1P63272 117 aaKnown RBP7.78□□□□□ -1.16
LIG1-213ENST00000596672 ZNF124Q15973 351 aa7.78□□□□□ -1.16
LIG1-213ENST00000596672 MLANAQ16655 118 aa7.78□□□□□ -1.16
LIG1-213ENST00000596672 ODF3L2Q3SX64 289 aa7.78□□□□□ -1.16
LIG1-213ENST00000596672 SP6Q3SY56 376 aa7.78□□□□□ -1.16
LIG1-213ENST00000596672 Q6ZRM9 215 aa7.78□□□□□ -1.16
LIG1-213ENST00000596672 MITD1Q8WV92 249 aa7.78□□□□□ -1.16
LIG1-213ENST00000596672 C21orf62Q9NYP8 219 aa7.78□□□□□ -1.16
LIG1-213ENST00000596672 IGHV3-49A0A0A0MS15 119 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 CRYM-AS1A6NIL9 109 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 CCSO14618 274 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 APOHP02749 345 aaPredicted RBP7.77□□□□□ -1.17
LIG1-213ENST00000596672 ELLP55199 621 aaPredicted RBP7.77□□□□□ -1.17
LIG1-213ENST00000596672 ERVK-16P61578 105 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 RND3P61587 244 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 ANKRD55Q3KP44 614 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 PVRIGQ6DKI7 326 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 CMTM1Q8IZ96 169 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 CCDC71LQ8N9Z2 235 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 OR1P1Q8NH06 330 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 LHFPL5Q8TAF8 219 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 NAA60Q9H7X0 242 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 FAM212BQ9NTI7 297 aaPredicted RBP7.77□□□□□ -1.17
LIG1-213ENST00000596672 MRPL27Q9P0M9 148 aaKnown RBP7.77□□□□□ -1.17
LIG1-213ENST00000596672 UBQLN2Q9UHD9 624 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 PRNDQ9UKY0 176 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 KCNIP3Q9Y2W7 256 aa7.77□□□□□ -1.17
LIG1-213ENST00000596672 IGHV3OR16-13A0A075B7E8 117 aa7.76□□□□□ -1.17
LIG1-213ENST00000596672 IGHV3-74A0A0B4J1X5 117 aa7.76□□□□□ -1.17
LIG1-213ENST00000596672 FAM25EA8MYX2 175 aa7.76□□□□□ -1.17
LIG1-213ENST00000596672 MT-CO2P00403 227 aa7.76□□□□□ -1.17
LIG1-213ENST00000596672 ANXA3P12429 323 aa7.76□□□□□ -1.17
LIG1-213ENST00000596672 HSPE1P61604 102 aaKnown RBP7.76□□□□□ -1.17
LIG1-213ENST00000596672 PRCDQ00LT1 54 aa7.76□□□□□ -1.17
LIG1-213ENST00000596672 FAM90A2PQ658T7 463 aa7.76□□□□□ -1.17
LIG1-213ENST00000596672 OR5B3Q8NH48 314 aa7.76□□□□□ -1.17
LIG1-213ENST00000596672 COQ8AQ8NI60 647 aa7.76□□□□□ -1.17
LIG1-213ENST00000596672 BSCL2Q96G97 398 aaPredicted RBP7.76□□□□□ -1.17
LIG1-213ENST00000596672 RNF2Q99496 336 aa7.76□□□□□ -1.17
LIG1-213ENST00000596672 TRAV25A0A0B4J276 109 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 A0A0B4J2A0 478 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 C3orf85A0A1B0GTC6 90 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 NDUFA4O00483 81 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 TSPAN4O14817 238 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 ST8SIA3O43173 380 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 OR5AC1P0C628 307 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 S100GP29377 79 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 TMEM187Q14656 261 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 HSD17B13Q7Z5P4 300 aaPredicted RBP7.75□□□□□ -1.17
LIG1-213ENST00000596672 UBAC2Q8NBM4 344 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 ZNF114Q8NC26 417 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 TMEM170AQ8WVE7 144 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 MARC2Q969Z3 335 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms