RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 TFPI2P48307 235 aa12.45□□□□□ -0.42
ZNF541-205ENST00000595558 MZT1Q08AG7 82 aa12.45□□□□□ -0.42
ZNF541-205ENST00000595558 A0A1W2PS18 150 aa12.44□□□□□ -0.42
ZNF541-205ENST00000595558 UPK2O00526 184 aa12.44□□□□□ -0.42
ZNF541-205ENST00000595558 PRCDQ00LT1 54 aa12.44□□□□□ -0.42
ZNF541-205ENST00000595558 TMEM183BQ1AE95 376 aa12.44□□□□□ -0.42
ZNF541-205ENST00000595558 ASCL5Q7RTU5 278 aa12.44□□□□□ -0.42
ZNF541-205ENST00000595558 NRN1Q9NPD7 142 aa12.44□□□□□ -0.42
ZNF541-205ENST00000595558 TECRQ9NZ01 308 aaKnown RBP12.44□□□□□ -0.42
ZNF541-205ENST00000595558 BMPR1BO00238 502 aa12.44□□□□□ -0.42
ZNF541-205ENST00000595558 AMTP48728 403 aa12.44□□□□□ -0.42
ZNF541-205ENST00000595558 FOXC1Q12948 553 aa12.44□□□□□ -0.42
ZNF541-205ENST00000595558 IGFL3Q6UXB1 125 aa12.44□□□□□ -0.42
ZNF541-205ENST00000595558 LHFPL4Q7Z7J7 247 aa12.44□□□□□ -0.42
ZNF541-205ENST00000595558 TMEM167BQ9NRX6 74 aa12.44□□□□□ -0.42
ZNF541-205ENST00000595558 SLC25A10Q9UBX3 287 aaPredicted RBP12.44□□□□□ -0.42
ZNF541-205ENST00000595558 DIRC3C9JPN6 131 aa12.43□□□□□ -0.42
ZNF541-205ENST00000595558 SAA1P0DJI8 122 aaPredicted RBP12.43□□□□□ -0.42
ZNF541-205ENST00000595558 CD40P25942 277 aa12.43□□□□□ -0.42
ZNF541-205ENST00000595558 BRS3P32247 399 aa12.43□□□□□ -0.42
ZNF541-205ENST00000595558 GLRXP35754 106 aa12.43□□□□□ -0.42
ZNF541-205ENST00000595558 TNFAIP6P98066 277 aaPredicted RBP12.43□□□□□ -0.42
ZNF541-205ENST00000595558 TIGITQ495A1 244 aa12.43□□□□□ -0.42
ZNF541-205ENST00000595558 IGF2BP2-AS1Q96M15 143 aa12.43□□□□□ -0.42
ZNF541-205ENST00000595558 SLC35D1Q9NTN3 355 aa12.43□□□□□ -0.42
ZNF541-205ENST00000595558 TANC2Q9HCD6 1990 aa12.43□□□□□ -0.42
ZNF541-205ENST00000595558 ZNF253O75346 499 aa12.43□□□□□ -0.42
ZNF541-205ENST00000595558 RPLP1P05386 114 aaKnown RBP12.43□□□□□ -0.42
ZNF541-205ENST00000595558 PYYP10082 97 aa12.43□□□□□ -0.42
ZNF541-205ENST00000595558 RNASE2P10153 161 aaKnown RBP12.43□□□□□ -0.42
ZNF541-205ENST00000595558 REG1BP48304 166 aa12.43□□□□□ -0.42
ZNF541-205ENST00000595558 IBA57Q5T440 356 aaKnown RBP12.43□□□□□ -0.42
ZNF541-205ENST00000595558 GAFA1Q96PS6 74 aa12.43□□□□□ -0.42
ZNF541-205ENST00000595558 PRNDQ9UKY0 176 aa12.43□□□□□ -0.42
ZNF541-205ENST00000595558 TRAV34A0A0B4J273 112 aa12.42□□□□□ -0.42
ZNF541-205ENST00000595558 FCN3O75636 299 aa12.42□□□□□ -0.42
ZNF541-205ENST00000595558 SLC25A33Q9BSK2 321 aa12.42□□□□□ -0.42
ZNF541-205ENST00000595558 CDC42EP3Q9UKI2 254 aa12.42□□□□□ -0.42
ZNF541-205ENST00000595558 OR5G3P0C626 314 aa12.42□□□□□ -0.42
ZNF541-205ENST00000595558 SLAQ13239 276 aa12.42□□□□□ -0.42
ZNF541-205ENST00000595558 ATOH7Q8N100 152 aa12.42□□□□□ -0.42
ZNF541-205ENST00000595558 Q8NA96 180 aa12.42□□□□□ -0.42
ZNF541-205ENST00000595558 FAM167A-AS1Q96KT0 104 aa12.42□□□□□ -0.42
ZNF541-205ENST00000595558 TMEM68Q96MH6 324 aa12.42□□□□□ -0.42
ZNF541-205ENST00000595558 SLC25A2Q9BXI2 301 aa12.42□□□□□ -0.42
ZNF541-205ENST00000595558 WNT10AQ9GZT5 417 aa12.42□□□□□ -0.42
ZNF541-205ENST00000595558 OSTCQ9NRP0 149 aa12.42□□□□□ -0.42
ZNF541-205ENST00000595558 DPRXA6NFQ7 191 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 POU2AF1Q16633 256 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 MAJINQ3KP22 176 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 STUMQ69YW2 141 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 LPAR2Q9HBW0 351 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 MALRD1Q5VYJ5 2156 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 ITGB1BP1O14713 200 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 FAM87AP0C7U9 286 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 CHRNB4P30926 498 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 PPOXP50336 477 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 C10orf55Q5SWW7 151 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 NIT1Q86X76 327 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.41□□□□□ -0.42
ZNF541-205ENST00000595558 CORO2AQ92828 525 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 KCNS1Q96KK3 526 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 SGK494Q96LW2 274 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 ARHGAP32A7KAX9 2087 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 CACNA1BQ00975 2339 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 ITPR1Q14643 2758 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 TRBV9A0A0B4J1U6 114 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 ISLRO14498 428 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 BSPH1Q075Z2 132 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 DIAPH2-AS1Q14236 149 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 MMDQ15546 238 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 FAM222BQ8WU58 562 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 MRPL20Q9BYC9 149 aaKnown RBP12.41□□□□□ -0.42
ZNF541-205ENST00000595558 ZNF586Q9NXT0 402 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 RNF7Q9UBF6 113 aa12.41□□□□□ -0.42
ZNF541-205ENST00000595558 SMIM27A0A1W2PRY6 76 aa12.4□□□□□ -0.42
ZNF541-205ENST00000595558 PSMB11A5LHX3 300 aa12.4□□□□□ -0.42
ZNF541-205ENST00000595558 DLEU1O43261 78 aa12.4□□□□□ -0.42
ZNF541-205ENST00000595558 PLAUP00749 431 aa12.4□□□□□ -0.42
ZNF541-205ENST00000595558 C8orf88P0DMB2 117 aa12.4□□□□□ -0.42
ZNF541-205ENST00000595558 CCL3L1P16619 93 aa12.4□□□□□ -0.42
ZNF541-205ENST00000595558 NTF3P20783 257 aa12.4□□□□□ -0.42
ZNF541-205ENST00000595558 GDF5OSQ5U4N7 250 aa12.4□□□□□ -0.42
ZNF541-205ENST00000595558 SLC25A48Q6ZT89 311 aaKnown RBP12.4□□□□□ -0.42
ZNF541-205ENST00000595558 FAM169BQ8N8A8 192 aa12.4□□□□□ -0.42
ZNF541-205ENST00000595558 FAM57AQ8TBR7 257 aa12.4□□□□□ -0.42
ZNF541-205ENST00000595558 ZNF355PQ9NSJ1 428 aa12.4□□□□□ -0.42
ZNF541-205ENST00000595558 ZNF257Q9Y2Q1 563 aa12.4□□□□□ -0.42
ZNF541-205ENST00000595558 IGLV3-9A0A075B6K5 115 aa12.4□□□□□ -0.43
ZNF541-205ENST00000595558 AMY1AP04745 511 aa12.4□□□□□ -0.43
ZNF541-205ENST00000595558 THBDP07204 575 aa12.4□□□□□ -0.43
ZNF541-205ENST00000595558 C3orf79P0CE67 100 aa12.4□□□□□ -0.43
ZNF541-205ENST00000595558 CEACAM8P31997 349 aaPredicted RBP12.4□□□□□ -0.43
ZNF541-205ENST00000595558 CTRLP40313 264 aa12.4□□□□□ -0.43
ZNF541-205ENST00000595558 UBE2L3P68036 154 aaKnown RBP12.4□□□□□ -0.43
ZNF541-205ENST00000595558 CD69Q07108 199 aa12.4□□□□□ -0.43
ZNF541-205ENST00000595558 SPATA45Q537H7 98 aa12.4□□□□□ -0.43
ZNF541-205ENST00000595558 C2orf83Q53S99 150 aa12.4□□□□□ -0.43
ZNF541-205ENST00000595558 RUSC1-AS1Q66K80 236 aa12.4□□□□□ -0.43
ZNF541-205ENST00000595558 LCN12Q6JVE5 192 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms