RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	FAM90A1	Q86YD7	464 aa		11.79	□□□□□ -0.52
RFX2-222	ENST00000592546	CNEP1R1	Q8N9A8	125 aa		11.79	□□□□□ -0.52
RFX2-222	ENST00000592546	LINC00479	Q96M42	142 aa		11.79	□□□□□ -0.52
RFX2-222	ENST00000592546	S1PR3	Q99500	378 aa		11.79	□□□□□ -0.52
RFX2-222	ENST00000592546	LAMA5	O15230	3695 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	GATA2	P23769	480 aa	Predicted RBP	11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	TAS2R45	P59539	299 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	FDCSP	Q8NFU4	85 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	OR2T6	Q8NHC8	308 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	SNRNP40	Q96DI7	357 aa	Known RBP	11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	GRAMD2B	Q96HH9	432 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	OBP2B	Q9NPH6	170 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	TMEM14B	Q9NUH8	114 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	GNG12	Q9UBI6	72 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	FZR1	Q9UM11	496 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	FOXA2	Q9Y261	457 aa	Predicted RBP	11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	hDV102S1	A0JD36	115 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546		J3QR06	171 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	REG1B	P48304	166 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	SLC25A34	Q6PIV7	304 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	TRAT1	Q6PIZ9	186 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	C12orf54	Q6X4T0	127 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	SVIL	O95425	2214 aa		11.78	□□□□□ -0.52
RFX2-222	ENST00000592546	SH2D7	A6NKC9	451 aa	Predicted RBP	11.77	□□□□□ -0.52
RFX2-222	ENST00000592546	VWA1	Q6PCB0	445 aa		11.77	□□□□□ -0.52
RFX2-222	ENST00000592546	MOB3B	Q86TA1	216 aa		11.77	□□□□□ -0.52
RFX2-222	ENST00000592546	DDB2	Q92466	427 aa		11.77	□□□□□ -0.52
RFX2-222	ENST00000592546	NUDT11	Q96G61	164 aa		11.77	□□□□□ -0.52
RFX2-222	ENST00000592546	DUSP13	Q9UII6	198 aa		11.77	□□□□□ -0.52
RFX2-222	ENST00000592546	DMXL1	Q9Y485	3027 aa		11.77	□□□□□ -0.53
RFX2-222	ENST00000592546	SYS1-DBNDD2	H3BUS1	97 aa		11.77	□□□□□ -0.53
RFX2-222	ENST00000592546	C8orf88	P0DMB2	117 aa		11.77	□□□□□ -0.53
RFX2-222	ENST00000592546	PRR27	Q6MZM9	219 aa		11.77	□□□□□ -0.53
RFX2-222	ENST00000592546	WDR82	Q6UXN9	313 aa		11.77	□□□□□ -0.53
RFX2-222	ENST00000592546		Q6ZT83	130 aa		11.77	□□□□□ -0.53
RFX2-222	ENST00000592546	SLC25A33	Q9BSK2	321 aa		11.77	□□□□□ -0.53
RFX2-222	ENST00000592546	C19orf24	Q9BVV8	132 aa		11.77	□□□□□ -0.53
RFX2-222	ENST00000592546	ENY2	Q9NPA8	101 aa		11.77	□□□□□ -0.53
RFX2-222	ENST00000592546	JPT1	Q9UK76	154 aa		11.77	□□□□□ -0.53
RFX2-222	ENST00000592546	VWC2L	B2RUY7	222 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546		K7ERU9	68 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	WT1	P19544	449 aa	Predicted RBP	11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	KIR2DS2	P43631	304 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	PSG9	Q00887	426 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	LINC00173	Q6ZV60	143 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	OR4S2	Q8NH73	311 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	IFI27L2	Q9H2X8	130 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546		A0A1B0GXF2	115 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	GAGE12B	A1L429	117 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	HIGD1C	A8MV81	97 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	KIR2DL2	P43627	348 aa	Predicted RBP	11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	CAMP	P49913	170 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	ZNF134	P52741	427 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	EDDM3A	Q14507	147 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	FAM162B	Q5T6X4	162 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	FAM71F2	Q6NXP2	309 aa		11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	CNOT1	A5YKK6	2376 aa	Known RBP	11.76	□□□□□ -0.53
RFX2-222	ENST00000592546	CD5L	O43866	347 aa		11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	MYOD1	P15172	320 aa		11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	INO80C	Q6PI98	192 aa	Predicted RBP	11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	ATP5L2	Q7Z4Y8	100 aa		11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	C9orf106	Q8NAJ2	232 aa		11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	FAM167A-AS1	Q96KT0	104 aa		11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	IGHV3-13	P01766	116 aa		11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	IGHV3-7	P01780	117 aa		11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	HLA-DRB1	P01911	266 aa		11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	FABP6	P51161	128 aa		11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	SCRT2	Q9NQ03	307 aa		11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	RIF1	Q5UIP0	2472 aa	Known RBP	11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.75	□□□□□ -0.53
RFX2-222	ENST00000592546	IGHV1-24	A0A0C4DH33	117 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	IGHG3	P01860	377 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	S100A7	P31151	101 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	NBL1	P41271	181 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	LOXL3	P58215	753 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	GUSBP1	Q15486	140 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	SMIM21	Q3B7S5	101 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	HINT2	Q9BX68	163 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	IDI2-AS1	Q9NZ38	188 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	ZNF835	Q9Y2P0	537 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	MUC6	Q6W4X9	2439 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	TRAV8-6	A0A0B4J262	113 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	CORT	O00230	105 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	IGKV3-15	P01624	115 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	UBE2L3	P68036	154 aa	Known RBP	11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	MORN5	Q5VZ52	161 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	CD177	Q8N6Q3	437 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	CHRDL1	Q9BU40	450 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	NCOR1P1	Q9H4R4	102 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	LEPROTL1	O95214	131 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	CHCHD1	Q96BP2	118 aa	Known RBP	11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	SLC25A2	Q9BXI2	301 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	TMEM191A	Q9H0A3	160 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	CXXC4	Q9H2H0	198 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	C7orf69	Q9H7B7	122 aa		11.74	□□□□□ -0.53
RFX2-222	ENST00000592546	CECR9	P0C854	216 aa		11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	SSX8	Q7RTT4	187 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms