RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 IGHV3-48P01763 117 aa13.84□□□□□ -0.19
CCDC43-205ENST00000592333 TCTAP57738 103 aa13.84□□□□□ -0.19
CCDC43-205ENST00000592333 MRPS10P82664 201 aaKnown RBP13.84□□□□□ -0.19
CCDC43-205ENST00000592333 CTF1Q16619 201 aa13.84□□□□□ -0.19
CCDC43-205ENST00000592333 BSXQ3C1V8 233 aa13.84□□□□□ -0.19
CCDC43-205ENST00000592333 OR52I2Q8NH67 350 aa13.84□□□□□ -0.19
CCDC43-205ENST00000592333 EXTL2Q9UBQ6 330 aa13.84□□□□□ -0.19
CCDC43-205ENST00000592333 CDS2O95674 445 aa13.83□□□□□ -0.2
CCDC43-205ENST00000592333 PI3P19957 117 aa13.83□□□□□ -0.2
CCDC43-205ENST00000592333 CRYBB3P26998 211 aa13.83□□□□□ -0.2
CCDC43-205ENST00000592333 SPCS3P61009 180 aa13.83□□□□□ -0.2
CCDC43-205ENST00000592333 SURF2Q15527 256 aaPredicted RBP13.83□□□□□ -0.2
CCDC43-205ENST00000592333 IZUMO4Q1ZYL8 232 aa13.83□□□□□ -0.2
CCDC43-205ENST00000592333 TRIM16LQ309B1 348 aa13.83□□□□□ -0.2
CCDC43-205ENST00000592333 GBGT1Q8N5D6 347 aa13.83□□□□□ -0.2
CCDC43-205ENST00000592333 OR11H2Q8NH07 326 aa13.83□□□□□ -0.2
CCDC43-205ENST00000592333 GRAMD2BQ96HH9 432 aa13.83□□□□□ -0.2
CCDC43-205ENST00000592333 ABHD1Q96SE0 405 aa13.83□□□□□ -0.2
CCDC43-205ENST00000592333 IGKV3-7A0A075B6H7 116 aa13.82□□□□□ -0.2
CCDC43-205ENST00000592333 IGHV3OR16-13A0A075B7E8 117 aa13.82□□□□□ -0.2
CCDC43-205ENST00000592333 IGHV3-74A0A0B4J1X5 117 aa13.82□□□□□ -0.2
CCDC43-205ENST00000592333 ETV6P41212 452 aa13.82□□□□□ -0.2
CCDC43-205ENST00000592333 HTR2BP41595 481 aa13.82□□□□□ -0.2
CCDC43-205ENST00000592333 HOXA1P49639 335 aaPredicted RBP13.82□□□□□ -0.2
CCDC43-205ENST00000592333 TMEM187Q14656 261 aa13.82□□□□□ -0.2
CCDC43-205ENST00000592333 MEF2DQ14814 521 aa13.82□□□□□ -0.2
CCDC43-205ENST00000592333 ZNF124Q15973 351 aa13.82□□□□□ -0.2
CCDC43-205ENST00000592333 C11orf45Q8TAV5 145 aa13.82□□□□□ -0.2
CCDC43-205ENST00000592333 NARS2Q96I59 477 aaKnown RBP13.82□□□□□ -0.2
CCDC43-205ENST00000592333 METTL26Q96S19 204 aa13.82□□□□□ -0.2
CCDC43-205ENST00000592333 TMEM222Q9H0R3 208 aa13.82□□□□□ -0.2
CCDC43-205ENST00000592333 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.82□□□□□ -0.2
CCDC43-205ENST00000592333 RABL2AQ9UBK7 228 aaPredicted RBP13.82□□□□□ -0.2
CCDC43-205ENST00000592333 RABL2BQ9UNT1 228 aa13.82□□□□□ -0.2
CCDC43-205ENST00000592333 A0A1B0GU03 582 aa13.81□□□□□ -0.2
CCDC43-205ENST00000592333 RPS10-NUDT3A0A1W2PQS6 291 aa13.81□□□□□ -0.2
CCDC43-205ENST00000592333 GABARAPH6UMI1 98 aa13.81□□□□□ -0.2
CCDC43-205ENST00000592333 RAB3DO95716 219 aa13.81□□□□□ -0.2
CCDC43-205ENST00000592333 CA1P00915 261 aaPredicted RBP13.81□□□□□ -0.2
CCDC43-205ENST00000592333 APOHP02749 345 aaPredicted RBP13.81□□□□□ -0.2
CCDC43-205ENST00000592333 OPRK1P41145 380 aa13.81□□□□□ -0.2
CCDC43-205ENST00000592333 EIF2B2P49770 351 aaKnown RBP13.81□□□□□ -0.2
CCDC43-205ENST00000592333 RPL11P62913 178 aaKnown RBP13.81□□□□□ -0.2
CCDC43-205ENST00000592333 SPINK9Q5DT21 86 aa13.81□□□□□ -0.2
CCDC43-205ENST00000592333 STEAP1BQ6NZ63 245 aa13.81□□□□□ -0.2
CCDC43-205ENST00000592333 LILRB2Q8N423 598 aa13.81□□□□□ -0.2
CCDC43-205ENST00000592333 OR13C8Q8NGS7 320 aa13.81□□□□□ -0.2
CCDC43-205ENST00000592333 IFNA4P05014 189 aa13.8□□□□□ -0.2
CCDC43-205ENST00000592333 PPP5CP53041 499 aa13.8□□□□□ -0.2
CCDC43-205ENST00000592333 DEFB131AP59861 70 aa13.8□□□□□ -0.2
CCDC43-205ENST00000592333 DHODHQ02127 395 aa13.8□□□□□ -0.2
CCDC43-205ENST00000592333 RBMS2Q15434 407 aaKnown RBP13.8□□□□□ -0.2
CCDC43-205ENST00000592333 GPR107Q5VW38 600 aa13.8□□□□□ -0.2
CCDC43-205ENST00000592333 MORN3Q6PF18 240 aaPredicted RBP13.8□□□□□ -0.2
CCDC43-205ENST00000592333 STHQ8IWL8 128 aa13.8□□□□□ -0.2
CCDC43-205ENST00000592333 RNASE11Q8TAA1 199 aaKnown RBP13.8□□□□□ -0.2
CCDC43-205ENST00000592333 HRH4Q9H3N8 390 aa13.8□□□□□ -0.2
CCDC43-205ENST00000592333 FNDC4Q9H6D8 234 aaPredicted RBP13.8□□□□□ -0.2
CCDC43-205ENST00000592333 SPP1P10451 314 aa13.79□□□□□ -0.2
CCDC43-205ENST00000592333 SLC25A4P12235 298 aa13.79□□□□□ -0.2
CCDC43-205ENST00000592333 AP2S1P53680 142 aaPredicted RBP13.79□□□□□ -0.2
CCDC43-205ENST00000592333 SP6Q3SY56 376 aa13.79□□□□□ -0.2
CCDC43-205ENST00000592333 SCGB2B2Q4G0G5 96 aa13.79□□□□□ -0.2
CCDC43-205ENST00000592333 C2orf83Q53S99 150 aa13.79□□□□□ -0.2
CCDC43-205ENST00000592333 OR4D10Q8NGI6 311 aa13.79□□□□□ -0.2
CCDC43-205ENST00000592333 MARCH1Q8TCQ1 289 aa13.79□□□□□ -0.2
CCDC43-205ENST00000592333 RNASEH2CQ8TDP1 164 aaKnown RBP13.79□□□□□ -0.2
CCDC43-205ENST00000592333 RBPMSQ93062 196 aaKnown RBP13.79□□□□□ -0.2
CCDC43-205ENST00000592333 TMEM230Q96A57 120 aa13.79□□□□□ -0.2
CCDC43-205ENST00000592333 C14orf166Q9Y224 244 aaKnown RBP13.79□□□□□ -0.2
CCDC43-205ENST00000592333 TEX13DA0A0J9YY54 714 aaPredicted RBP13.78□□□□□ -0.2
CCDC43-205ENST00000592333 C11orf94C9JXX5 98 aa13.78□□□□□ -0.2
CCDC43-205ENST00000592333 K7EQG2 157 aa13.78□□□□□ -0.2
CCDC43-205ENST00000592333 IGKV1-17P01599 117 aa13.78□□□□□ -0.2
CCDC43-205ENST00000592333 YPEL3P61236 119 aaPredicted RBP13.78□□□□□ -0.2
CCDC43-205ENST00000592333 RNASE12Q5GAN4 147 aaKnown RBP13.78□□□□□ -0.2
CCDC43-205ENST00000592333 NOXA1Q86UR1 476 aa13.78□□□□□ -0.2
CCDC43-205ENST00000592333 GLYATL2Q8WU03 294 aa13.78□□□□□ -0.2
CCDC43-205ENST00000592333 RABAC1Q9UI14 185 aa13.78□□□□□ -0.2
CCDC43-205ENST00000592333 A0A0G2JRQ6 117 aa13.77□□□□□ -0.21
CCDC43-205ENST00000592333 HELTA6NFD8 242 aa13.77□□□□□ -0.21
CCDC43-205ENST00000592333 DISC1C4P0D8 188 aa13.77□□□□□ -0.21
CCDC43-205ENST00000592333 P2RY1P47900 373 aa13.77□□□□□ -0.21
CCDC43-205ENST00000592333 ETFRF1Q6IPR1 90 aa13.77□□□□□ -0.21
CCDC43-205ENST00000592333 Q6ZRM9 215 aa13.77□□□□□ -0.21
CCDC43-205ENST00000592333 TRPT1Q86TN4 253 aaKnown RBP13.77□□□□□ -0.21
CCDC43-205ENST00000592333 OR1S2Q8NGQ3 325 aa13.77□□□□□ -0.21
CCDC43-205ENST00000592333 RTBDNQ9BSG5 229 aaPredicted RBP13.77□□□□□ -0.21
CCDC43-205ENST00000592333 NAA60Q9H7X0 242 aa13.77□□□□□ -0.21
CCDC43-205ENST00000592333 SEPSECSQ9HD40 501 aaKnown RBP13.77□□□□□ -0.21
CCDC43-205ENST00000592333 U3KQE9 123 aa13.77□□□□□ -0.21
CCDC43-205ENST00000592333 CTDSPLO15194 276 aa13.76□□□□□ -0.21
CCDC43-205ENST00000592333 OR5AC1P0C628 307 aa13.76□□□□□ -0.21
CCDC43-205ENST00000592333 MIFP14174 115 aa13.76□□□□□ -0.21
CCDC43-205ENST00000592333 LEMD1Q68G75 181 aa13.76□□□□□ -0.21
CCDC43-205ENST00000592333 C2CD4CQ8TF44 421 aa13.76□□□□□ -0.21
CCDC43-205ENST00000592333 DCANP1Q8TF63 244 aa13.76□□□□□ -0.21
CCDC43-205ENST00000592333 Q8WTZ3 238 aa13.76□□□□□ -0.21
CCDC43-205ENST00000592333 SMIM4Q8WVI0 70 aa13.76□□□□□ -0.21
CCDC43-205ENST00000592333 IL22RA2Q969J5 263 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms