RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 CKS2P33552 79 aa14.08□□□□□ -0.15
SMARCA4-215ENST00000590574 ZNF324O75467 553 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-215ENST00000590574 NMUP48645 174 aa14.08□□□□□ -0.16
SMARCA4-215ENST00000590574 C2orf83Q53S99 150 aa14.08□□□□□ -0.16
SMARCA4-215ENST00000590574 OR10J3Q5JRS4 329 aa14.08□□□□□ -0.16
SMARCA4-215ENST00000590574 C10orf55Q5SWW7 151 aa14.08□□□□□ -0.16
SMARCA4-215ENST00000590574 TCF24Q7RTU0 167 aa14.08□□□□□ -0.16
SMARCA4-215ENST00000590574 FER1L5A0AVI2 2057 aa14.08□□□□□ -0.16
SMARCA4-215ENST00000590574 LINC01560Q8TB33 94 aa14.08□□□□□ -0.16
SMARCA4-215ENST00000590574 B9A039 149 aa14.08□□□□□ -0.16
SMARCA4-215ENST00000590574 GPR82Q96P67 336 aa14.08□□□□□ -0.16
SMARCA4-215ENST00000590574 A6NDN8 102 aa14.07□□□□□ -0.16
SMARCA4-215ENST00000590574 IGHG3P01860 377 aa14.07□□□□□ -0.16
SMARCA4-215ENST00000590574 APOBEC3AP31941 199 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-215ENST00000590574 EPDR1Q9UM22 224 aa14.07□□□□□ -0.16
SMARCA4-215ENST00000590574 NCOR1O75376 2440 aa14.07□□□□□ -0.16
SMARCA4-215ENST00000590574 DNLZQ5SXM8 178 aa14.07□□□□□ -0.16
SMARCA4-215ENST00000590574 MUC15Q8N387 334 aa14.07□□□□□ -0.16
SMARCA4-215ENST00000590574 ST6GALNAC6Q969X2 333 aa14.07□□□□□ -0.16
SMARCA4-215ENST00000590574 ICE1Q9Y2F5 2266 aa14.07□□□□□ -0.16
SMARCA4-215ENST00000590574 HLA-DRB1P01911 266 aa14.07□□□□□ -0.16
SMARCA4-215ENST00000590574 AREGP15514 252 aa14.07□□□□□ -0.16
SMARCA4-215ENST00000590574 UQCRFS1P47985 274 aa14.07□□□□□ -0.16
SMARCA4-215ENST00000590574 Q6ZR03 302 aa14.07□□□□□ -0.16
SMARCA4-215ENST00000590574 DNAH12Q6ZR08 3092 aa14.07□□□□□ -0.16
SMARCA4-215ENST00000590574 LIPFP07098 398 aa14.06□□□□□ -0.16
SMARCA4-215ENST00000590574 TRAV30A0A087WSZ9 112 aa14.06□□□□□ -0.16
SMARCA4-215ENST00000590574 CD33P20138 364 aa14.06□□□□□ -0.16
SMARCA4-215ENST00000590574 C1orf194Q5T5A4 169 aa14.06□□□□□ -0.16
SMARCA4-215ENST00000590574 C12orf54Q6X4T0 127 aa14.06□□□□□ -0.16
SMARCA4-215ENST00000590574 LPAR2Q9HBW0 351 aa14.06□□□□□ -0.16
SMARCA4-215ENST00000590574 A0A1B0GUS0 222 aa14.06□□□□□ -0.16
SMARCA4-215ENST00000590574 OR2T8A6NH00 312 aa14.06□□□□□ -0.16
SMARCA4-215ENST00000590574 BMI1P35226 326 aa14.06□□□□□ -0.16
SMARCA4-215ENST00000590574 PSG9Q00887 426 aa14.06□□□□□ -0.16
SMARCA4-215ENST00000590574 GTF2H5Q6ZYL4 71 aa14.06□□□□□ -0.16
SMARCA4-215ENST00000590574 OR10AG1Q8NH19 301 aa14.06□□□□□ -0.16
SMARCA4-215ENST00000590574 GAFA1Q96PS6 74 aa14.06□□□□□ -0.16
SMARCA4-215ENST00000590574 ESPL1Q14674 2120 aa14.05□□□□□ -0.16
SMARCA4-215ENST00000590574 OR4C46A6NHA9 309 aa14.05□□□□□ -0.16
SMARCA4-215ENST00000590574 TEX45Q8NA69 505 aa14.05□□□□□ -0.16
SMARCA4-215ENST00000590574 MYO7BQ6PIF6 2116 aa14.05□□□□□ -0.16
SMARCA4-215ENST00000590574 LOC102724200A0A096LPH7 203 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-215ENST00000590574 LURAP1LQ8IV03 231 aa14.05□□□□□ -0.16
SMARCA4-215ENST00000590574 ABHD17AQ96GS6 310 aa14.05□□□□□ -0.16
SMARCA4-215ENST00000590574 CGB1A6NKQ9 187 aa14.05□□□□□ -0.16
SMARCA4-215ENST00000590574 MLANAQ16655 118 aa14.05□□□□□ -0.16
SMARCA4-215ENST00000590574 IGHV3-23P01764 117 aa14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 TNFSF13O75888 250 aa14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 RELQ04864 619 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 RBPMS2Q6ZRY4 209 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 NUDT10Q8NFP7 164 aa14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 NUDT11Q96G61 164 aa14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 RABAC1Q9UI14 185 aa14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 IGKV3-7A0A075B6H7 116 aa14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 IGHV3-35A0A0C4DH35 117 aa14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 PRR31Q5SQ13 230 aa14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 DMRTA1Q5VZB9 504 aa14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 TMEM200BQ69YZ2 307 aa14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 DOCK7Q96N67 2140 aa14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 F5H697 171 aa14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 IGKV1-16P04430 117 aa14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 LY96Q9Y6Y9 160 aa14.04□□□□□ -0.16
SMARCA4-215ENST00000590574 LOC105371242A0A075B767 164 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 TMEM133Q9H2Q1 129 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 SOX21Q9Y651 276 aaPredicted RBP14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 PCNX3Q9H6A9 2034 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 SPANXN1Q5VSR9 72 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 CRIP3Q6Q6R5 217 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 PRDM13Q9H4Q3 707 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 AP5S1Q9NUS5 200 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 PCDH15Q96QU1 1955 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 SHANK1Q9Y566 2161 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 A6NNC1 897 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 FAM106CPP0CH98 169 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 UNQ5815/PRO19632Q6UWF5 114 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 J3QR89 54 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 RPL7P18124 248 aaKnown RBP14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 CDPF1Q6NVV7 123 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 LAMTOR2Q9Y2Q5 125 aa14.03□□□□□ -0.16
SMARCA4-215ENST00000590574 A0A1B0GUT8 65 aa14.02□□□□□ -0.16
SMARCA4-215ENST00000590574 BEND2Q8NDZ0 799 aa14.02□□□□□ -0.16
SMARCA4-215ENST00000590574 MYOZ3Q8TDC0 251 aa14.02□□□□□ -0.16
SMARCA4-215ENST00000590574 ZNRD1Q9P1U0 126 aa14.02□□□□□ -0.16
SMARCA4-215ENST00000590574 APOHP02749 345 aaPredicted RBP14.02□□□□□ -0.16
SMARCA4-215ENST00000590574 TSKUQ8WUA8 353 aa14.02□□□□□ -0.17
SMARCA4-215ENST00000590574 OTORQ9NRC9 128 aa14.02□□□□□ -0.17
SMARCA4-215ENST00000590574 MUC21A0A0G2JKD1 596 aa14.02□□□□□ -0.17
SMARCA4-215ENST00000590574 MUC21A0A140T8X8 626 aa14.02□□□□□ -0.17
SMARCA4-215ENST00000590574 NUTF2P61970 127 aaKnown RBP14.02□□□□□ -0.17
SMARCA4-215ENST00000590574 MUC21Q5SSG8 566 aa14.02□□□□□ -0.17
SMARCA4-215ENST00000590574 A8MWP6 167 aa14.01□□□□□ -0.17
SMARCA4-215ENST00000590574 H0YJW9 148 aa14.01□□□□□ -0.17
SMARCA4-215ENST00000590574 VDAC2P45880 294 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-215ENST00000590574 ZNF474Q6S9Z5 364 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-215ENST00000590574 TMEM78Q5T7P6 136 aa14.01□□□□□ -0.17
SMARCA4-215ENST00000590574 ZNF114Q8NC26 417 aa14.01□□□□□ -0.17
SMARCA4-215ENST00000590574 GPR179Q6PRD1 2367 aa14.01□□□□□ -0.17
SMARCA4-215ENST00000590574 MBD3L4A6NDZ8 208 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-215ENST00000590574 MBD3L3A6NE82 208 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms