RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 TAAR2Q9P1P5 351 aa4.73□□□□□ -1.65
SMAD4-208ENST00000589706 HS3ST2Q9Y278 367 aa4.73□□□□□ -1.65
SMAD4-208ENST00000589706 POLR1DQ9Y2S0 133 aa4.73□□□□□ -1.65
SMAD4-208ENST00000589706 KLHDC2Q9Y2U9 406 aa4.73□□□□□ -1.65
SMAD4-208ENST00000589706 OR1A2Q9Y585 309 aa4.73□□□□□ -1.65
SMAD4-208ENST00000589706 MUC21A0A0G2JKD1 596 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 MUC21A0A140T8X8 626 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 A0A1B0GV50 99 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 A0A1W2PPI3 338 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 FAM231BA6NCW3 169 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 CRYM-AS1A6NIL9 109 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 CEBPZOSA8MTT3 80 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 C21orf140B9A014 251 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 CCL21O00585 134 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 DEGS1O15121 323 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 SNAI2O43623 268 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 FOXH1O75593 365 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 CA2P00918 260 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 TTRP02766 147 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 FABP2P12104 132 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 IGLL1P15814 213 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 KIR2DS4P43632 304 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 OR1D4P47884 311 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 ZNF83P51522 516 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 TCTAP57738 103 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 GNG3P63215 75 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 MUC21Q5SSG8 566 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 ZNF550Q7Z398 422 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 ZNF683Q8IZ20 524 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 SMIM20Q8N5G0 67 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 OR8B3Q8NGG8 313 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 PATE1Q8WXA2 126 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 OR8B2Q96RD0 313 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 ATP5SQ99766 215 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 TXNDC17Q9BRA2 123 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 ANAPC13Q9BS18 74 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 NDFIP1Q9BT67 221 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 GGTLC1Q9BX51 225 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 C1QTNF4Q9BXJ3 329 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 OR2D2Q9H210 308 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 TMEM133Q9H2Q1 129 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 C11orf1Q9H5F2 150 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 PDFQ9HBH1 243 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 ZNF160Q9HCG1 818 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 PHPT1Q9NRX4 125 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-208ENST00000589706 VPREB3Q9UKI3 123 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 ZNF257Q9Y2Q1 563 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 MED31Q9Y3C7 131 aa4.72□□□□□ -1.65
SMAD4-208ENST00000589706 FLNAP21333 2647 aaKnown RBP4.71□□□□□ -1.66
SMAD4-208ENST00000589706 IGHV4OR15-8A0A075B7B6 117 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 TEX48A0A1B0GUV7 120 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 A0A1W2PPM0 123 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 A0A1W2PS18 150 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 ZFP92A6NM28 416 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 H0Y980 276 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 H0YIG0 161 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 H7C1C5 153 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 CRXO43186 299 aaPredicted RBP4.71□□□□□ -1.66
SMAD4-208ENST00000589706 SYNGR1O43759 233 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 SCGB2A1O75556 95 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 NDUFB2O95178 105 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 ETHE1O95571 254 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 WNT2P09544 360 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 H2BFMP0C1H6 154 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 OR9G9P0C7N8 305 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 CT45A6P0DMU7 189 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 CT45A5P0DMU8 189 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 CT45A7P0DMV0 189 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 GPR183P32249 361 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 ATP5J2P56134 94 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 KLRD1Q13241 179 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 PDLIM3Q53GG5 364 aaPredicted RBP4.71□□□□□ -1.66
SMAD4-208ENST00000589706 CT45A1Q5HYN5 189 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 GLYATL3Q5SZD4 288 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 ZNF324BQ6AW86 544 aaPredicted RBP4.71□□□□□ -1.66
SMAD4-208ENST00000589706 AGTRAPQ6RW13 159 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 IGFL3Q6UXB1 125 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 TMEM123Q8N131 208 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 C2orf73Q8N5S3 287 aaPredicted RBP4.71□□□□□ -1.66
SMAD4-208ENST00000589706 RFLNBQ8N5W9 214 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 LINC01555Q8NAE3 123 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 OR52E2Q8NGJ4 325 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 OR51A4Q8NGJ6 313 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 OR10G6Q8NH81 332 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 OR4A5Q8NH83 315 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 ATP6V0E2Q8NHE4 81 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 CT45A3Q8NHU0 189 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 PHLDA1Q8WV24 401 aaPredicted RBP4.71□□□□□ -1.66
SMAD4-208ENST00000589706 LSM10Q969L4 123 aaKnown RBP4.71□□□□□ -1.66
SMAD4-208ENST00000589706 C10orf35Q96D05 121 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 C18orf12Q96KH6 178 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 C4orf45Q96LM5 186 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 Q96M85 177 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 SDF2Q99470 211 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 PRSS27Q9BQR3 290 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 SFXN3Q9BWM7 321 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 FGF22Q9HCT0 170 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 RABAC1Q9UI14 185 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 RARRES3Q9UL19 164 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 SPCS1Q9Y6A9 102 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms