RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 RAB11AP62491 216 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 VAMP2P63027 116 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 RPP30P78346 268 aaKnown RBP8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 CD69Q07108 199 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 ZNF616Q08AN1 781 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 FHL3Q13643 280 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 Q5BKY6 102 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 TMEM14EPQ6UXP3 125 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 NOXA1Q86UR1 476 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 HAPLN4Q86UW8 402 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 UBAC2Q8NBM4 344 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 DPF1Q92782 380 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 RNF126Q9BV68 326 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 RANGRFQ9HD47 186 aaPredicted RBP8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 TRRAPQ9Y4A5 3859 aa8.23□□□□□ -1.09
SMARCA4-213ENST00000587988 TRAV14DV4A0A0A6YYC5 116 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 A0A1B0GVG6 124 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 MPC2O95563 127 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 PF4P02776 101 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 METTL15P1P0C7V9 234 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 HOXD3P31249 432 aaPredicted RBP8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 ADMP35318 185 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 ARL3P36405 182 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 BCAP31P51572 246 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 MFAP4P55083 255 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 ARL16Q0P5N6 197 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 Q56UQ5 140 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 ACSM6Q6P461 480 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 PRSS54Q6PEW0 395 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 SLC16A13Q7RTY0 426 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 LINC00482Q8N8I6 264 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 ZNF414Q96IQ9 312 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 CHRDL1Q9BU40 450 aa8.22□□□□□ -1.09
SMARCA4-213ENST00000587988 hCG_2014768A0A024R1R8 64 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 IGHV3-35A0A0C4DH35 117 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 RPS10-NUDT3A0A1W2PQS6 291 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 IGSF23A1L1A6 192 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 TGOLN2O43493 480 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 OR2C1O95371 312 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 RLN2P04090 185 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 CTSGP08311 255 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 GIPP09681 153 aaPredicted RBP8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 PVALBP20472 110 aaPredicted RBP8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 FCGR2BP31994 310 aaPredicted RBP8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 GPX4P36969 197 aaPredicted RBP8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 CAV2P51636 162 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 RND2P52198 227 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 GAMTQ14353 236 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 OR8G2PQ6IF36 304 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 TMEM252Q8N6L7 170 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 OR4X1Q8NH49 305 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 DCUN1D4Q92564 292 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 NPIPB3Q92617 1050 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 DLX4Q92988 240 aaPredicted RBP8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 TXN2Q99757 166 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 LYRM2Q9NU23 88 aaPredicted RBP8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 MBD2Q9UBB5 411 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 WNK1Q9H4A3 2382 aa8.21□□□□□ -1.1
SMARCA4-213ENST00000587988 E5RGE8 158 aa8.2□□□□□ -1.1
SMARCA4-213ENST00000587988 GGCTO75223 188 aaKnown RBP8.2□□□□□ -1.1
SMARCA4-213ENST00000587988 CLN5O75503 358 aa8.2□□□□□ -1.1
SMARCA4-213ENST00000587988 CST7O76096 145 aa8.2□□□□□ -1.1
SMARCA4-213ENST00000587988 SLC25A4P12235 298 aa8.2□□□□□ -1.1
SMARCA4-213ENST00000587988 KLF5Q13887 457 aaPredicted RBP8.2□□□□□ -1.1
SMARCA4-213ENST00000587988 RPEL1Q2QD12 228 aa8.2□□□□□ -1.1
SMARCA4-213ENST00000587988 FAM209BQ5JX69 171 aa8.2□□□□□ -1.1
SMARCA4-213ENST00000587988 PRR31Q5SQ13 230 aa8.2□□□□□ -1.1
SMARCA4-213ENST00000587988 ETFRF1Q6IPR1 90 aa8.2□□□□□ -1.1
SMARCA4-213ENST00000587988 TMEM116Q8NCL8 245 aa8.2□□□□□ -1.1
SMARCA4-213ENST00000587988 BSCL2Q96G97 398 aaPredicted RBP8.2□□□□□ -1.1
SMARCA4-213ENST00000587988 ACY3Q96HD9 319 aa8.2□□□□□ -1.1
SMARCA4-213ENST00000587988 ATP6V0BQ99437 205 aa8.2□□□□□ -1.1
SMARCA4-213ENST00000587988 G3V3Q6 166 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 GNG7O60262 68 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 LYL1P12980 280 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 ZP3P21754 424 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 P2RY1P47900 373 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 NPBWR1P48145 328 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 SYNJ2BPP57105 145 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 RAP2BP61225 183 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 NHLH2Q02577 135 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 TIGITQ495A1 244 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 SPSB3Q6PJ21 355 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 ACOT7LQ6ZUV0 252 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 TMEM217Q8N7C4 229 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 OR10P1Q8NGE3 313 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 CACNG8Q8WXS5 425 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 SLC35E1Q96K37 410 aa8.19□□□□□ -1.1
SMARCA4-213ENST00000587988 CMYA5Q8N3K9 4069 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 DNHD1Q96M86 4753 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 IGKV1D-37A0A075B6S9 117 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 IGKV1OR2-108A0A075B7D4 117 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 SMLR1H3BR10 107 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 NUPL2O15504 423 aaKnown RBP8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 IGKV1-17P01599 117 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 IGLC1P0CG04 106 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 PET100P0DJ07 73 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 SULT1A1P50225 295 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 EWSR1Q01844 656 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 TREML4Q6UXN2 200 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms