RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 RPL11P62913 178 aaKnown RBP10.54□□□□□ -0.72
VMP1-206ENST00000587945 PAFAH1B2P68402 229 aa10.54□□□□□ -0.72
VMP1-206ENST00000587945 FAM24BQ8N5W8 94 aa10.54□□□□□ -0.72
VMP1-206ENST00000587945 CCDC71LQ8N9Z2 235 aa10.54□□□□□ -0.72
VMP1-206ENST00000587945 RNASE11Q8TAA1 199 aaKnown RBP10.54□□□□□ -0.72
VMP1-206ENST00000587945 RRNAD1Q96FB5 475 aaKnown RBP10.54□□□□□ -0.72
VMP1-206ENST00000587945 MS4A6AQ9H2W1 248 aa10.54□□□□□ -0.72
VMP1-206ENST00000587945 DNASE2O00115 360 aaPredicted RBP10.53□□□□□ -0.72
VMP1-206ENST00000587945 RGS5O15539 181 aa10.53□□□□□ -0.72
VMP1-206ENST00000587945 OR5AC1P0C628 307 aa10.53□□□□□ -0.72
VMP1-206ENST00000587945 OPRK1P41145 380 aa10.53□□□□□ -0.72
VMP1-206ENST00000587945 SUB1P53999 127 aaKnown RBP eCLIP10.53□□□□□ -0.72
VMP1-206ENST00000587945 DEFB131AP59861 70 aa10.53□□□□□ -0.72
VMP1-206ENST00000587945 SPCS2Q15005 226 aa10.53□□□□□ -0.72
VMP1-206ENST00000587945 LEMD1Q68G75 181 aa10.53□□□□□ -0.72
VMP1-206ENST00000587945 LHFPL5Q8TAF8 219 aa10.53□□□□□ -0.72
VMP1-206ENST00000587945 RTBDNQ9BSG5 229 aaPredicted RBP10.53□□□□□ -0.72
VMP1-206ENST00000587945 ENY2Q9NPA8 101 aa10.53□□□□□ -0.72
VMP1-206ENST00000587945 GABARAPH6UMI1 98 aa10.52□□□□□ -0.73
VMP1-206ENST00000587945 TMEM217Q8N7C4 229 aa10.52□□□□□ -0.73
VMP1-206ENST00000587945 C15orf40Q8WUR7 153 aa10.52□□□□□ -0.73
VMP1-206ENST00000587945 RARRES2Q99969 163 aa10.52□□□□□ -0.73
VMP1-206ENST00000587945 TEX13DA0A0J9YY54 714 aaPredicted RBP10.51□□□□□ -0.73
VMP1-206ENST00000587945 CORTO00230 105 aa10.51□□□□□ -0.73
VMP1-206ENST00000587945 CLN5O75503 358 aa10.51□□□□□ -0.73
VMP1-206ENST00000587945 CDS2O95674 445 aa10.51□□□□□ -0.73
VMP1-206ENST00000587945 ATF4P18848 351 aaPredicted RBP10.51□□□□□ -0.73
VMP1-206ENST00000587945 ALDH3B2P48448 385 aa10.51□□□□□ -0.73
VMP1-206ENST00000587945 BSXQ3C1V8 233 aa10.51□□□□□ -0.73
VMP1-206ENST00000587945 TIGITQ495A1 244 aa10.51□□□□□ -0.73
VMP1-206ENST00000587945 GPR141Q7Z602 305 aa10.51□□□□□ -0.73
VMP1-206ENST00000587945 SELENOHQ8IZQ5 122 aaKnown RBP10.51□□□□□ -0.73
VMP1-206ENST00000587945 OR11H2Q8NH07 326 aa10.51□□□□□ -0.73
VMP1-206ENST00000587945 OR4X1Q8NH49 305 aa10.51□□□□□ -0.73
VMP1-206ENST00000587945 GLYATL2Q8WU03 294 aa10.51□□□□□ -0.73
VMP1-206ENST00000587945 PHLDA1Q8WV24 401 aaPredicted RBP10.51□□□□□ -0.73
VMP1-206ENST00000587945 TMEM222Q9H0R3 208 aa10.51□□□□□ -0.73
VMP1-206ENST00000587945 NAA60Q9H7X0 242 aa10.51□□□□□ -0.73
VMP1-206ENST00000587945 RABAC1Q9UI14 185 aa10.51□□□□□ -0.73
VMP1-206ENST00000587945 C14orf166Q9Y224 244 aaKnown RBP10.51□□□□□ -0.73
VMP1-206ENST00000587945 KMT2AQ03164 3969 aa10.5□□□□□ -0.73
VMP1-206ENST00000587945 DEFB4AO15263 64 aa10.5□□□□□ -0.73
VMP1-206ENST00000587945 CA1P00915 261 aaPredicted RBP10.5□□□□□ -0.73
VMP1-206ENST00000587945 IGKV1-17P01599 117 aa10.5□□□□□ -0.73
VMP1-206ENST00000587945 CD5P06127 495 aa10.5□□□□□ -0.73
VMP1-206ENST00000587945 NPPCP23582 126 aa10.5□□□□□ -0.73
VMP1-206ENST00000587945 RPL5P46777 297 aaKnown RBP10.5□□□□□ -0.73
VMP1-206ENST00000587945 SPCS3P61009 180 aa10.5□□□□□ -0.73
VMP1-206ENST00000587945 MEF2DQ14814 521 aa10.5□□□□□ -0.73
VMP1-206ENST00000587945 GATAD1Q8WUU5 269 aa10.5□□□□□ -0.73
VMP1-206ENST00000587945 TMEM230Q96A57 120 aa10.5□□□□□ -0.73
VMP1-206ENST00000587945 GPR146Q96CH1 333 aa10.5□□□□□ -0.73
VMP1-206ENST00000587945 METTL26Q96S19 204 aa10.5□□□□□ -0.73
VMP1-206ENST00000587945 MRPS26Q9BYN8 205 aaKnown RBP10.5□□□□□ -0.73
VMP1-206ENST00000587945 TMEM231Q9H6L2 316 aa10.5□□□□□ -0.73
VMP1-206ENST00000587945 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.5□□□□□ -0.73
VMP1-206ENST00000587945 CACNG5Q9UF02 275 aa10.5□□□□□ -0.73
VMP1-206ENST00000587945 KLK5Q9Y337 293 aaPredicted RBP10.5□□□□□ -0.73
VMP1-206ENST00000587945 DISC1C4P0D8 188 aa10.49□□□□□ -0.73
VMP1-206ENST00000587945 B3GALNT1O75752 331 aa10.49□□□□□ -0.73
VMP1-206ENST00000587945 NXPH3O95157 252 aa10.49□□□□□ -0.73
VMP1-206ENST00000587945 CRYBB3P26998 211 aa10.49□□□□□ -0.73
VMP1-206ENST00000587945 NANOS2P60321 138 aaKnown RBP10.49□□□□□ -0.73
VMP1-206ENST00000587945 MRPS10P82664 201 aaKnown RBP10.49□□□□□ -0.73
VMP1-206ENST00000587945 SSBP1Q04837 148 aaKnown RBP10.49□□□□□ -0.73
VMP1-206ENST00000587945 AARDQ4LEZ3 155 aa10.49□□□□□ -0.73
VMP1-206ENST00000587945 TMEM268Q5VZI3 342 aa10.49□□□□□ -0.73
VMP1-206ENST00000587945 STXBP6Q8NFX7 210 aa10.49□□□□□ -0.73
VMP1-206ENST00000587945 OR4C16Q8NGL9 310 aa10.49□□□□□ -0.73
VMP1-206ENST00000587945 SMIM4Q8WVI0 70 aa10.49□□□□□ -0.73
VMP1-206ENST00000587945 RBPMSQ93062 196 aaKnown RBP10.49□□□□□ -0.73
VMP1-206ENST00000587945 HEYLQ9NQ87 328 aaPredicted RBP10.49□□□□□ -0.73
VMP1-206ENST00000587945 PRR13Q9NZ81 148 aa10.49□□□□□ -0.73
VMP1-206ENST00000587945 GPR132Q9UNW8 380 aa10.49□□□□□ -0.73
VMP1-206ENST00000587945 TRAV2A0A0B4J234 112 aa10.48□□□□□ -0.73
VMP1-206ENST00000587945 A0A1W2PS18 150 aa10.48□□□□□ -0.73
VMP1-206ENST00000587945 CRYM-AS1A6NIL9 109 aa10.48□□□□□ -0.73
VMP1-206ENST00000587945 AKAIN1P0CW23 69 aa10.48□□□□□ -0.73
VMP1-206ENST00000587945 HTR2BP41595 481 aa10.48□□□□□ -0.73
VMP1-206ENST00000587945 P2RY1P47900 373 aa10.48□□□□□ -0.73
VMP1-206ENST00000587945 IL18Q14116 193 aa10.48□□□□□ -0.73
VMP1-206ENST00000587945 RBMS2Q15434 407 aaKnown RBP10.48□□□□□ -0.73
VMP1-206ENST00000587945 CLVS1Q8IUQ0 354 aaPredicted RBP10.48□□□□□ -0.73
VMP1-206ENST00000587945 FAM219AQ8IW50 185 aa10.48□□□□□ -0.73
VMP1-206ENST00000587945 OR52E5Q8NH55 327 aa10.48□□□□□ -0.73
VMP1-206ENST00000587945 TMEM170AQ8WVE7 144 aa10.48□□□□□ -0.73
VMP1-206ENST00000587945 DIRAS2Q96HU8 199 aa10.48□□□□□ -0.73
VMP1-206ENST00000587945 FBXL17Q9UF56 701 aa10.48□□□□□ -0.73
VMP1-206ENST00000587945 RPS10-NUDT3A0A1W2PQS6 291 aa10.47□□□□□ -0.73
VMP1-206ENST00000587945 KNCNA6PVL3 124 aa10.47□□□□□ -0.73
VMP1-206ENST00000587945 CEBPZOSA8MTT3 80 aa10.47□□□□□ -0.73
VMP1-206ENST00000587945 K7EQG2 157 aa10.47□□□□□ -0.73
VMP1-206ENST00000587945 ZNF688P0C7X2 276 aa10.47□□□□□ -0.73
VMP1-206ENST00000587945 IGLC1P0CG04 106 aa10.47□□□□□ -0.73
VMP1-206ENST00000587945 RND2P52198 227 aa10.47□□□□□ -0.73
VMP1-206ENST00000587945 DHODHQ02127 395 aa10.47□□□□□ -0.73
VMP1-206ENST00000587945 TMEM187Q14656 261 aa10.47□□□□□ -0.73
VMP1-206ENST00000587945 SURF2Q15527 256 aaPredicted RBP10.47□□□□□ -0.73
VMP1-206ENST00000587945 PRSS54Q6PEW0 395 aa10.47□□□□□ -0.73
VMP1-206ENST00000587945 STHQ8IWL8 128 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms