RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 FNDC4Q9H6D8 234 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC6A-203ENST00000587818 KCNIP3Q9Y2W7 256 aa14.94□□□□□ -0.02
TRAPPC6A-203ENST00000587818 TMEM56-RWDD3S4R434 201 aa14.94□□□□□ -0.02
TRAPPC6A-203ENST00000587818 IGKV3-7A0A075B6H7 116 aa14.93□□□□□ -0.02
TRAPPC6A-203ENST00000587818 NPBWR1P48145 328 aa14.93□□□□□ -0.02
TRAPPC6A-203ENST00000587818 KLF9Q13886 244 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC6A-203ENST00000587818 SPAG8Q99932 426 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC6A-203ENST00000587818 RBM38Q9H0Z9 239 aaKnown RBP14.93□□□□□ -0.02
TRAPPC6A-203ENST00000587818 HEYLQ9NQ87 328 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC6A-203ENST00000587818 V9GYH0 126 aa14.93□□□□□ -0.02
TRAPPC6A-203ENST00000587818 TRAV14DV4A0A0A6YYC5 116 aa14.92□□□□□ -0.02
TRAPPC6A-203ENST00000587818 APOHP02749 345 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC6A-203ENST00000587818 TFPI2P48307 235 aa14.92□□□□□ -0.02
TRAPPC6A-203ENST00000587818 SUPT4H1P63272 117 aaKnown RBP14.92□□□□□ -0.02
TRAPPC6A-203ENST00000587818 ZNF79Q15937 498 aa14.92□□□□□ -0.02
TRAPPC6A-203ENST00000587818 LYZL2Q7Z4W2 148 aa14.92□□□□□ -0.02
TRAPPC6A-203ENST00000587818 OR10C1Q96KK4 312 aa14.92□□□□□ -0.02
TRAPPC6A-203ENST00000587818 SCGB3A2Q96PL1 93 aa14.92□□□□□ -0.02
TRAPPC6A-203ENST00000587818 LOC102724200A0A096LPH7 203 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC6A-203ENST00000587818 IGHV3-66A0A0C4DH42 116 aa14.91□□□□□ -0.02
TRAPPC6A-203ENST00000587818 CEBPZOSA8MTT3 80 aa14.91□□□□□ -0.02
TRAPPC6A-203ENST00000587818 S100A5P33763 92 aa14.91□□□□□ -0.02
TRAPPC6A-203ENST00000587818 OPRK1P41145 380 aa14.91□□□□□ -0.02
TRAPPC6A-203ENST00000587818 AARDQ4LEZ3 155 aa14.91□□□□□ -0.02
TRAPPC6A-203ENST00000587818 LILRB2Q8N423 598 aa14.91□□□□□ -0.02
TRAPPC6A-203ENST00000587818 TOMM5Q8N4H5 51 aa14.91□□□□□ -0.02
TRAPPC6A-203ENST00000587818 OR52E5Q8NH55 327 aa14.91□□□□□ -0.02
TRAPPC6A-203ENST00000587818 TRIM63Q969Q1 353 aa14.91□□□□□ -0.02
TRAPPC6A-203ENST00000587818 PUS1Q9Y606 427 aaKnown RBP eCLIP14.91□□□□□ -0.02
TRAPPC6A-203ENST00000587818 A0A1B0GU03 582 aa14.9□□□□□ -0.02
TRAPPC6A-203ENST00000587818 BSXQ3C1V8 233 aa14.9□□□□□ -0.02
TRAPPC6A-203ENST00000587818 TMED4Q7Z7H5 227 aa14.9□□□□□ -0.02
TRAPPC6A-203ENST00000587818 CCDC190Q86UF4 302 aa14.9□□□□□ -0.02
TRAPPC6A-203ENST00000587818 GBGT1Q8N5D6 347 aa14.9□□□□□ -0.02
TRAPPC6A-203ENST00000587818 GALNT14Q96FL9 552 aa14.9□□□□□ -0.02
TRAPPC6A-203ENST00000587818 GGTLC1Q9BX51 225 aa14.9□□□□□ -0.02
TRAPPC6A-203ENST00000587818 DYNC2H1Q8NCM8 4307 aaKnown RBP14.89□□□□□ -0.03
TRAPPC6A-203ENST00000587818 CORTO00230 105 aa14.89□□□□□ -0.03
TRAPPC6A-203ENST00000587818 HTR2BP41595 481 aa14.89□□□□□ -0.03
TRAPPC6A-203ENST00000587818 ODF3L2Q3SX64 289 aa14.89□□□□□ -0.03
TRAPPC6A-203ENST00000587818 TIGITQ495A1 244 aa14.89□□□□□ -0.03
TRAPPC6A-203ENST00000587818 ZNF600Q6ZNG1 722 aa14.89□□□□□ -0.03
TRAPPC6A-203ENST00000587818 WFDC3Q8IUB2 231 aa14.89□□□□□ -0.03
TRAPPC6A-203ENST00000587818 ST8SIA2Q92186 375 aa14.89□□□□□ -0.03
TRAPPC6A-203ENST00000587818 ZFAND3Q9H8U3 227 aa14.89□□□□□ -0.03
TRAPPC6A-203ENST00000587818 OR4C46A6NHA9 309 aa14.88□□□□□ -0.03
TRAPPC6A-203ENST00000587818 CLN5O75503 358 aa14.88□□□□□ -0.03
TRAPPC6A-203ENST00000587818 SULT1A3P0DMM9 295 aa14.88□□□□□ -0.03
TRAPPC6A-203ENST00000587818 SULT1A4P0DMN0 295 aa14.88□□□□□ -0.03
TRAPPC6A-203ENST00000587818 FAUP35544 74 aaKnown RBP14.88□□□□□ -0.03
TRAPPC6A-203ENST00000587818 ZNF124Q15973 351 aa14.88□□□□□ -0.03
TRAPPC6A-203ENST00000587818 APRG1Q8IVJ8 170 aa14.88□□□□□ -0.03
TRAPPC6A-203ENST00000587818 TMEM170AQ8WVE7 144 aa14.88□□□□□ -0.03
TRAPPC6A-203ENST00000587818 IL22RA2Q969J5 263 aa14.88□□□□□ -0.03
TRAPPC6A-203ENST00000587818 RPL35AP18077 110 aaKnown RBP14.87□□□□□ -0.03
TRAPPC6A-203ENST00000587818 C2orf83Q53S99 150 aa14.87□□□□□ -0.03
TRAPPC6A-203ENST00000587818 FAM90A2PQ658T7 463 aa14.87□□□□□ -0.03
TRAPPC6A-203ENST00000587818 TCF24Q7RTU0 167 aa14.87□□□□□ -0.03
TRAPPC6A-203ENST00000587818 LGI3Q8N145 548 aa14.87□□□□□ -0.03
TRAPPC6A-203ENST00000587818 OR4X1Q8NH49 305 aa14.87□□□□□ -0.03
TRAPPC6A-203ENST00000587818 GINS3Q9BRX5 216 aa14.87□□□□□ -0.03
TRAPPC6A-203ENST00000587818 A0A0B4J2A0 478 aa14.86□□□□□ -0.03
TRAPPC6A-203ENST00000587818 DFFBO76075 338 aa14.86□□□□□ -0.03
TRAPPC6A-203ENST00000587818 AP3S2P59780 193 aa14.86□□□□□ -0.03
TRAPPC6A-203ENST00000587818 NMSQ5H8A3 153 aa14.86□□□□□ -0.03
TRAPPC6A-203ENST00000587818 SLC24A4Q8NFF2 622 aa14.86□□□□□ -0.03
TRAPPC6A-203ENST00000587818 OVOL2Q9BRP0 275 aa14.86□□□□□ -0.03
TRAPPC6A-203ENST00000587818 RBKSQ9H477 322 aa14.86□□□□□ -0.03
TRAPPC6A-203ENST00000587818 SHPKQ9UHJ6 478 aa14.86□□□□□ -0.03
TRAPPC6A-203ENST00000587818 STARD9Q9P2P6 4700 aa14.86□□□□□ -0.03
TRAPPC6A-203ENST00000587818 CCR6P51684 374 aa14.85□□□□□ -0.03
TRAPPC6A-203ENST00000587818 SMCO1Q147U7 214 aa14.85□□□□□ -0.03
TRAPPC6A-203ENST00000587818 PRSS54Q6PEW0 395 aa14.85□□□□□ -0.03
TRAPPC6A-203ENST00000587818 VSIRQ9H7M9 311 aa14.85□□□□□ -0.03
TRAPPC6A-203ENST00000587818 TENM2Q9NT68 2774 aa14.84□□□□□ -0.03
TRAPPC6A-203ENST00000587818 IGKV1-17P01599 117 aa14.84□□□□□ -0.03
TRAPPC6A-203ENST00000587818 ANXA3P12429 323 aa14.84□□□□□ -0.03
TRAPPC6A-203ENST00000587818 NPPCP23582 126 aa14.84□□□□□ -0.03
TRAPPC6A-203ENST00000587818 RND2P52198 227 aa14.84□□□□□ -0.03
TRAPPC6A-203ENST00000587818 RPL11P62913 178 aaKnown RBP14.84□□□□□ -0.03
TRAPPC6A-203ENST00000587818 TNFRSF9Q07011 255 aa14.84□□□□□ -0.03
TRAPPC6A-203ENST00000587818 SRRQ9GZT4 340 aa14.84□□□□□ -0.03
TRAPPC6A-203ENST00000587818 LINC00854A0A1B0GVQ3 168 aa14.83□□□□□ -0.04
TRAPPC6A-203ENST00000587818 RPS10-NUDT3A0A1W2PQS6 291 aa14.83□□□□□ -0.04
TRAPPC6A-203ENST00000587818 ZNF701M0R085 212 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC6A-203ENST00000587818 IFNA10P01566 189 aa14.83□□□□□ -0.04
TRAPPC6A-203ENST00000587818 VAMP1P23763 118 aa14.83□□□□□ -0.04
TRAPPC6A-203ENST00000587818 NPY1RP25929 384 aa14.83□□□□□ -0.04
TRAPPC6A-203ENST00000587818 BAK1Q16611 211 aa14.83□□□□□ -0.04
TRAPPC6A-203ENST00000587818 OR1S1Q8NH92 325 aa14.83□□□□□ -0.04
TRAPPC6A-203ENST00000587818 NPIPB3Q92617 1050 aa14.83□□□□□ -0.04
TRAPPC6A-203ENST00000587818 HSPB7Q9UBY9 170 aa14.83□□□□□ -0.04
TRAPPC6A-203ENST00000587818 RBMS2Q15434 407 aaKnown RBP14.82□□□□□ -0.04
TRAPPC6A-203ENST00000587818 TMEM128Q5BJH2 165 aa14.82□□□□□ -0.04
TRAPPC6A-203ENST00000587818 SPANXN2Q5MJ10 180 aa14.82□□□□□ -0.04
TRAPPC6A-203ENST00000587818 RNASEH2CQ8TDP1 164 aaKnown RBP14.82□□□□□ -0.04
TRAPPC6A-203ENST00000587818 DTD1Q8TEA8 209 aa14.82□□□□□ -0.04
TRAPPC6A-203ENST00000587818 MS4A6AQ9H2W1 248 aa14.82□□□□□ -0.04
TRAPPC6A-203ENST00000587818 CSMD3Q7Z407 3707 aa14.81□□□□□ -0.04
TRAPPC6A-203ENST00000587818 TRAV30A0A087WSZ9 112 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms